Literature DB >> 22736222

Computational investigation on microsolvation of the osmolyte glycine betaine [GB (H(2)O)(1-7)].

Srinivasadesikan Venkatesan1, Shyi-Long Lee.   

Abstract

The preferential interactions of glycine betaine (GB) with solvent components and the effect of solvent on its stability have been examined. In particular, the microsolvation of organic osmolyte and widely important osmoprotectant in nature as glycine betaine has been reported by using M06 method. A number of configurations (b(X) (a-z)) of the clusters for one to seven water molecules (× = 1-7) have been considered for the microsolvation. Structures of stable conformers are obtained and denoted as b1a, b2a, b3a, b4a, b5a, b6a and b7a. It is observed from the interaction energy difference (∆E) that only seven water molecules can be accommodated in the first solvation shell to stabilize GB. It is also observed that the calculated relative energy using M06 is in close agreement with calculations at the MP2 level of theory.

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Year:  2012        PMID: 22736222     DOI: 10.1007/s00894-012-1501-5

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  36 in total

1.  Growth of Lactococcus lactis strains at low water activity: correlation with the ability to accumulate glycine betaine.

Authors:  J O'Callaghan; S Condon
Journal:  Int J Food Microbiol       Date:  2000-04-10       Impact factor: 5.277

2.  Glycine betaine transport in Lactococcus lactis is osmotically regulated at the level of expression and translocation activity.

Authors:  T van Der Heide; B Poolman
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

3.  Nanomolar levels of dimethylsulfoniopropionate, dimethylsulfonioacetate, and glycine betaine are sufficient to confer osmoprotection to Escherichia coli.

Authors:  A Cosquer; V Pichereau; J A Pocard; J Minet; M Cormier; T Bernard
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

4.  Fourier transform infrared spectroscopic and theoretical study of water interactions with glycine and its N-methylated derivatives.

Authors:  Aneta Panuszko; Maciej Śmiechowski; Janusz Stangret
Journal:  J Chem Phys       Date:  2011-03-21       Impact factor: 3.488

5.  Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro.

Authors:  E S Courtenay; M W Capp; C F Anderson; M T Record
Journal:  Biochemistry       Date:  2000-04-18       Impact factor: 3.162

6.  Improved osmotolerance of recombinant Escherichia coli by de novo glycine betaine biosynthesis.

Authors:  N von Weymarn; A Nyyssölä; T Reinikainen; M Leisola; H Ojamo
Journal:  Appl Microbiol Biotechnol       Date:  2001-03       Impact factor: 4.813

7.  Glycerophosphocholine and betaine counteract the effect of urea on pyruvate kinase.

Authors:  M B Burg; E D Kwon; E M Peters
Journal:  Kidney Int Suppl       Date:  1996-12       Impact factor: 10.545

8.  Osmolyte counteracts urea-induced denaturation of alpha-chymotrypsin.

Authors:  Pannur Venkatesu; Ming-Jer Lee; Ho-Mu Lin
Journal:  J Phys Chem B       Date:  2009-04-16       Impact factor: 2.991

9.  Many-body interaction in glycine-(water)3 complex using density functional theory method.

Authors:  Ajay Chaudhari; Prabhat K Sahu; Shyi-Long Lee
Journal:  J Chem Phys       Date:  2004-01-01       Impact factor: 3.488

10.  Glycine betaine and proline betaine in human blood and urine.

Authors:  M Lever; P C Sizeland; L M Bason; C M Hayman; S T Chambers
Journal:  Biochim Biophys Acta       Date:  1994-08-18
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