Literature DB >> 22735778

Porphyrins from a metagenomic library of the marine sponge Discodermia calyx.

Rui He1, Toshiyuki Wakimoto, Yuya Takeshige, Yoko Egami, Hiromichi Kenmoku, Takuya Ito, Bochu Wang, Yoshinori Asakawa, Ikuro Abe.   

Abstract

Marine sponges harbouring uncultured symbiotic bacteria are important sources of biologically active compounds. Since they would be interesting resources to explore unknown functional genes by means of a metagenomic approach, we constructed a metagenomic library of the Japanese marine sponge Discodermia calyx. The functional screening afforded the two clones producing porphyrins as red pigments. The isolation and structural elucidation of the red pigments revealed that the major red pigment was Zn-coproporphyrin III. The sequence data of the clones identified genes encoding glutamyl-tRNA reductase along with other ORFs related to porphyrin biosynthesis.

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Year:  2012        PMID: 22735778     DOI: 10.1039/c2mb25169h

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  4 in total

1.  Calyculin biogenesis from a pyrophosphate protoxin produced by a sponge symbiont.

Authors:  Toshiyuki Wakimoto; Yoko Egami; Yu Nakashima; Yukihiko Wakimoto; Takahiro Mori; Takayoshi Awakawa; Takuya Ito; Hiromichi Kenmoku; Yoshinori Asakawa; Jörn Piel; Ikuro Abe
Journal:  Nat Chem Biol       Date:  2014-06-29       Impact factor: 15.040

2.  An Efficient DNA Extraction for a Blue Xestospongia sp. Sponge and Its Associated Microorganisms Containing Cytotoxic Substances.

Authors:  Thaniwan Cheun-Arom; Taksina Chuanasa
Journal:  Mar Biotechnol (NY)       Date:  2021-10-29       Impact factor: 3.619

3.  Metagenomic Analysis of the Sponge Discodermia Reveals the Production of the Cyanobacterial Natural Product Kasumigamide by 'Entotheonella'.

Authors:  Yu Nakashima; Yoko Egami; Miki Kimura; Toshiyuki Wakimoto; Ikuro Abe
Journal:  PLoS One       Date:  2016-10-12       Impact factor: 3.240

4.  Indole Derivatives Produced by the Metagenome Genes of the Escherichia coli-Harboring Marine Sponge Discodermia calyx.

Authors:  Feng-Lou Liu; Xiao-Long Yang
Journal:  Molecules       Date:  2017-04-25       Impact factor: 4.411

  4 in total

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