Literature DB >> 22734044

Non-parametric estimation of a time-dependent predictive accuracy curve.

P Saha-Chaudhuri1, P J Heagerty.   

Abstract

A major biomedical goal associated with evaluating a candidate biomarker or developing a predictive model score for event-time outcomes is to accurately distinguish between incident cases from the controls surviving beyond t throughout the entire study period. Extensions of standard binary classification measures like time-dependent sensitivity, specificity, and receiver operating characteristic (ROC) curves have been developed in this context (Heagerty, P. J., and others, 2000. Time-dependent ROC curves for censored survival data and a diagnostic marker. Biometrics 56, 337-344). We propose a direct, non-parametric method to estimate the time-dependent Area under the curve (AUC) which we refer to as the weighted mean rank (WMR) estimator. The proposed estimator performs well relative to the semi-parametric AUC curve estimator of Heagerty and Zheng (2005. Survival model predictive accuracy and ROC curves. Biometrics 61, 92-105). We establish the asymptotic properties of the proposed estimator and show that the accuracy of markers can be compared very simply using the difference in the WMR statistics. Estimators of pointwise standard errors are provided.

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Year:  2012        PMID: 22734044      PMCID: PMC3520498          DOI: 10.1093/biostatistics/kxs021

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  7 in total

1.  Time-dependent ROC curves for censored survival data and a diagnostic marker.

Authors:  P J Heagerty; T Lumley; M S Pepe
Journal:  Biometrics       Date:  2000-06       Impact factor: 2.571

2.  Simultaneous inferences on the contrast of two hazard functions with censored observations.

Authors:  Peter B Gilbert; L J Wei; Michael R Kosorok; John D Clemens
Journal:  Biometrics       Date:  2002-12       Impact factor: 2.571

3.  Survival model predictive accuracy and ROC curves.

Authors:  Patrick J Heagerty; Yingye Zheng
Journal:  Biometrics       Date:  2005-03       Impact factor: 2.571

4.  A time-dependent discrimination index for survival data.

Authors:  Laura Antolini; Patrizia Boracchi; Elia Biganzoli
Journal:  Stat Med       Date:  2005-12-30       Impact factor: 2.373

5.  Development of a predictive model for long-term survival after lung transplantation and implications for the lung allocation score.

Authors:  Cynthia J Gries; Tessa C Rue; Patrick J Heagerty; Jeffrey D Edelman; Michael S Mulligan; Christopher H Goss
Journal:  J Heart Lung Transplant       Date:  2010-04-09       Impact factor: 10.247

Review 6.  Development of the allocation system for deceased donor liver transplantation.

Authors:  John M Coombes; James F Trotter
Journal:  Clin Med Res       Date:  2005-05

7.  Evaluating the yield of medical tests.

Authors:  F E Harrell; R M Califf; D B Pryor; K L Lee; R A Rosati
Journal:  JAMA       Date:  1982-05-14       Impact factor: 56.272

  7 in total
  22 in total

1.  A direct method to evaluate the time-dependent predictive accuracy for biomarkers.

Authors:  Weining Shen; Jing Ning; Ying Yuan
Journal:  Biometrics       Date:  2015-03-10       Impact factor: 2.571

Review 2.  A Tutorial on Evaluating the Time-Varying Discrimination Accuracy of Survival Models Used in Dynamic Decision Making.

Authors:  Aasthaa Bansal; Patrick J Heagerty
Journal:  Med Decis Making       Date:  2018-10-14       Impact factor: 2.583

3.  Lymph node ratio-based staging system for esophageal squamous cell carcinoma.

Authors:  Shao-Bin Chen; Hong-Rui Weng; Geng Wang; Xiao-Fang Zou; Di-Tian Liu; Yu-Ping Chen; Hao Zhang
Journal:  World J Gastroenterol       Date:  2015-06-28       Impact factor: 5.742

4.  Prioritized concordance index for hierarchical survival outcomes.

Authors:  Li C Cheung; Qing Pan; Noorie Hyun; Hormuzd A Katki
Journal:  Stat Med       Date:  2019-04-07       Impact factor: 2.373

5.  Comparison of a preoperative MR-based recurrence risk score versus the postoperative score and four clinical staging systems in hepatocellular carcinoma: a retrospective cohort study.

Authors:  Hong Wei; Hanyu Jiang; Yun Qin; Yuanan Wu; Jeong Min Lee; Fang Yuan; Tianying Zheng; Ting Duan; Zhen Zhang; Yali Qu; Jie Chen; Yuntian Chen; Zheng Ye; Shan Yao; Lin Zhang; Ting Yang; Bin Song
Journal:  Eur Radiol       Date:  2022-05-13       Impact factor: 5.315

6.  Arterial Stiffness and Long-Term Risk of Health Outcomes: The Framingham Heart Study.

Authors:  Ramachandran S Vasan; Stephanie Pan; Vanessa Xanthakis; Alexa Beiser; Martin G Larson; Sudha Seshadri; Gary F Mitchell
Journal:  Hypertension       Date:  2022-02-16       Impact factor: 10.190

7.  Predictive accuracy of markers or risk scores for interval censored survival data.

Authors:  Yuan Wu; Xiaofei Wang; Jiaxing Lin; Beilin Jia; Kouros Owzar
Journal:  Stat Med       Date:  2020-04-15       Impact factor: 2.373

8.  Time-dependent classification accuracy curve under marker-dependent sampling.

Authors:  Zhaoyin Zhu; Xiaofei Wang; Paramita Saha-Chaudhuri; Andrzej S Kosinski; Stephen L George
Journal:  Biom J       Date:  2016-04-27       Impact factor: 2.207

9.  On the time-varying predictive performance of longitudinal biomarkers: Measure and estimation.

Authors:  Jing Zhang; Jing Ning; Xuelin Huang; Ruosha Li
Journal:  Stat Med       Date:  2021-06-22       Impact factor: 2.373

10.  A Novel Tool to Evaluate the Accuracy of Predicting Survival and Guiding Lung Transplantation in Cystic Fibrosis.

Authors:  Aasthaa Bansal; Nicole Mayer-Hamblett; Christopher H Goss; Lingtak N Chan; Patrick J Heagerty
Journal:  Epidemiology (Sunnyvale)       Date:  2019-06-17
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