Literature DB >> 22733884

Genome assembly of bell pepper endornavirus from small RNA.

Noa Sela1, Neta Luria, Aviv Dombrovsky.   

Abstract

The family Endornaviridae infects diverse hosts, including plants, fungi, and oomycetes. Here we report for the first time the assembly of bell pepper endornavirus by next-generation sequencing of viral small RNA. Such a population of small RNA indicates the activation of the viral immunity silencing machinery by this cryptic virus, which probably encodes a novel silencing suppressor.

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Year:  2012        PMID： 22733884      PMCID： PMC3416276          DOI： 10.1128/JVI.00983-12

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  5 in total

1.  Transmission of a dsRNA in bell pepper and evidence that it consists of the genome of an endornavirus.

Authors:  Rodrigo A Valverde; Dina L Gutierrez
Journal:  Virus Genes       Date:  2007-03-29       Impact factor: 2.332

2.  The remarkable evolutionary history of endornaviruses.

Authors:  Marilyn J Roossinck; Sead Sabanadzovic; Ryo Okada; Rodrigo A Valverde
Journal:  J Gen Virol       Date:  2011-07-20       Impact factor: 3.891

3.  Bell pepper endornavirus: molecular and biological properties, and occurrence in the genus Capsicum.

Authors:  Ryo Okada; Eri Kiyota; Sead Sabanadzovic; Hiromitsu Moriyama; Toshiyuki Fukuhara; Prasenjit Saha; Marilyn J Roossinck; Ake Severin; Rodrigo A Valverde
Journal:  J Gen Virol       Date:  2011-07-20       Impact factor: 3.891

4.  Tablet--next generation sequence assembly visualization.

Authors:  Iain Milne; Micha Bayer; Linda Cardle; Paul Shaw; Gordon Stephen; Frank Wright; David Marshall
Journal:  Bioinformatics       Date:  2009-12-04       Impact factor: 6.937

5.  BFAST: an alignment tool for large scale genome resequencing.

Authors:  Nils Homer; Barry Merriman; Stanley F Nelson
Journal:  PLoS One       Date:  2009-11-11       Impact factor: 3.240
  5 in total
  8 in total

1.  A local strain of Paprika mild mottle virus breaks L3 resistance in peppers and is accelerated in Tomato brown rugose fruit virus-infected Tm-22-resistant tomatoes.

Authors:  Neta Luria; Elisheva Smith; Noa Sela; Oded Lachman; Ilana Bekelman; Amnon Koren; Aviv Dombrovsky
Journal:  Virus Genes       Date:  2018-02-10       Impact factor: 2.332

2.  Deep sequencing of mycovirus-derived small RNAs from Botrytis species.

Authors:  Livia Donaire; María A Ayllón
Journal:  Mol Plant Pathol       Date:  2016-10-12       Impact factor: 5.663

3.  Complete nucleotide sequence and genome organization of an endornavirus from bottle gourd (Lagenaria siceraria) in California, U.S.A.

Authors:  Sun-Jung Kwon; Shih-Hua Tan; Georgios Vidalakis
Journal:  Virus Genes       Date:  2014-05-13       Impact factor: 2.332

4.  Metagenomics of plant and fungal viruses reveals an abundance of persistent lifestyles.

Authors:  Marilyn J Roossinck
Journal:  Front Microbiol       Date:  2015-01-12       Impact factor: 5.640

5.  Pathogenic seedborne viruses are rare but Phaseolus vulgaris endornaviruses are common in bean varieties grown in Nicaragua and Tanzania.

Authors:  Noora Nordenstedt; Delfia Marcenaro; Daudi Chilagane; Beatrice Mwaipopo; Minna-Liisa Rajamäki; Susan Nchimbi-Msolla; Paul J R Njau; Deusdedith R Mbanzibwa; Jari P T Valkonen
Journal:  PLoS One       Date:  2017-05-25       Impact factor: 3.240

6.  Lettuce Chlorosis Virus Disease: A New Threat to Cannabis Production.

Authors:  Lior Hadad; Neta Luria; Elisheva Smith; Noa Sela; Oded Lachman; Aviv Dombrovsky
Journal:  Viruses       Date:  2019-08-29       Impact factor: 5.048

7.  Identification and genome analysis of tomato chlorotic spot virus and dsRNA viruses from coinfected vegetables in the Dominican Republic by high-throughput sequencing.

Authors:  Reina Teresa Martínez; Mariana Martins Severo de Almeida; Rosalba Rodriguez; Athos Silva de Oliveira; Fernando Lucas Melo; Renato Oliveira Resende
Journal:  Virol J       Date:  2018-01-26       Impact factor: 4.099

8.  Ultrastructural Analysis of Cells From Bell Pepper (Capsicum annuum) Infected With Bell Pepper Endornavirus.

Authors:  Katarzyna Otulak-Kozieł; Edmund Kozieł; Cesar Escalante; Rodrigo A Valverde
Journal:  Front Plant Sci       Date:  2020-04-28       Impact factor: 5.753
  8 in total

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