Literature DB >> 22733879

Complete genome sequence of Cronobacter sakazakii temperate bacteriophage phiES15.

Ju-Hoon Lee1, Younho Choi, Hakdong Shin, Junghyun Lee, Sangryeol Ryu.   

Abstract

While most phage genome studies have been focused on the virulent phages, the inducible temperate bacteriophage genome study provides more detailed information about the interaction between the host strain and the phage. To study this interaction in detail, UV-induced phiES15 bacteriophage was isolated from the host strain Cronobacter sakazakii ES15 and its genome was completely sequenced. Here we announce the genome sequence of phiES15 and report major findings from the annotation.

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Year:  2012        PMID: 22733879      PMCID: PMC3416292          DOI: 10.1128/JVI.01042-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  14 in total

1.  GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.

Authors:  J Besemer; A Lomsadze; M Borodovsky
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

2.  InterProScan--an integration platform for the signature-recognition methods in InterPro.

Authors:  E M Zdobnov; R Apweiler
Journal:  Bioinformatics       Date:  2001-09       Impact factor: 6.937

3.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

4.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Enterobacter sakazakii bacteriophages can prevent bacterial growth in reconstituted infant formula.

Authors:  Kwang-Pyo Kim; Jochen Klumpp; Martin J Loessner
Journal:  Int J Food Microbiol       Date:  2006-12-28       Impact factor: 5.277

7.  In vivo studies on the interaction of RecBCD enzyme and lambda Gam protein.

Authors:  N Marsić; S Roje; I Stojiljković; E Salaj-Smic; Z Trgovcević
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

8.  Identification of a new inhibitor of essential division gene ftsZ as the kil gene of defective prophage Rac.

Authors:  A Conter; J P Bouché; M Dassain
Journal:  J Bacteriol       Date:  1996-09       Impact factor: 3.490

Review 9.  Enterobacter sakazakii: an emerging pathogen in powdered infant formula.

Authors:  D Drudy; N R Mullane; T Quinn; P G Wall; S Fanning
Journal:  Clin Infect Dis       Date:  2006-02-22       Impact factor: 9.079

10.  Decreasing Enterobacter sakazakii (Cronobacter spp.) food contamination level with bacteriophages: prospects and problems.

Authors:  Sophie Zuber; Catherine Boissin-Delaporte; Lise Michot; Carol Iversen; Benjamin Diep; Harald Brüssow; Pieter Breeuwer
Journal:  Microb Biotechnol       Date:  2008-11       Impact factor: 5.813

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  6 in total

1.  Complete genome sequence of Cronobacter sakazakii bacteriophage vB_CsaM_GAP161.

Authors:  Reza Abbasifar; Andrew M Kropinski; Parviz M Sabour; Hans-Wolfgang Ackermann; Erika J Lingohr; Mansel W Griffiths
Journal:  J Virol       Date:  2012-12       Impact factor: 5.103

2.  Genome sequence of Cronobacter sakazakii myovirus vB_CsaM_GAP31.

Authors:  Reza Abbasifar; Andrew M Kropinski; Parviz M Sabour; Hans-Wolfgang Ackermann; Argentina Alanis Villa; Arash Abbasifar; Mansel W Griffiths
Journal:  J Virol       Date:  2012-12       Impact factor: 5.103

3.  A Novel Bacteriophage Targeting Cronobacter sakazakii Is a Potential Biocontrol Agent in Foods.

Authors:  Ju-Hoon Lee; Jaewoo Bai; Hakdong Shin; Yeran Kim; Bookyung Park; Sunggi Heu; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2015-10-23       Impact factor: 4.792

4.  Characterization of Cronobacter sakazakii Strains Originating from Plant-Origin Foods Using Comparative Genomic Analyses and Zebrafish Infectivity Studies.

Authors:  Hyein Jang; Athmanya Eshwar; Angelika Lehner; Jayanthi Gangiredla; Isha R Patel; Junia Jean-Gilles Beaubrun; Hannah R Chase; Flavia Negrete; Samantha Finkelstein; Leah M Weinstein; Katie Ko; Nicole Addy; Laura Ewing; Jungha Woo; Youyoung Lee; Kunho Seo; Ziad Jaradat; Shabarinath Srikumar; Séamus Fanning; Roger Stephan; Ben D Tall; Gopal R Gopinath
Journal:  Microorganisms       Date:  2022-07-11

5.  The Genome of Cronobacter sakazakii Bacteriophage vB_CsaP_GAP227 Suggests a New Genus within the Autographivirinae.

Authors:  Reza Abbasifar; Andrew M Kropinski; Parviz M Sabour; Hans-Wolfgang Ackermann; Argentina Alanis Villa; Arash Abbasifar; Mansel W Griffiths
Journal:  Genome Announc       Date:  2013-02-14

6.  Complete genome sequence and phenotype microarray analysis of Cronobacter sakazakii SP291: a persistent isolate cultured from a powdered infant formula production facility.

Authors:  Qiongqiong Yan; Karen A Power; Shane Cooney; Edward Fox; Gopal R Gopinath; Christopher J Grim; Ben D Tall; Matthew P McCusker; Séamus Fanning
Journal:  Front Microbiol       Date:  2013-09-02       Impact factor: 5.640

  6 in total

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