Literature DB >> 22733333

A paper and plastic device for performing recombinase polymerase amplification of HIV DNA.

Brittany A Rohrman1, Rebecca R Richards-Kortum.   

Abstract

Despite the importance of early diagnosis and treatment of HIV, only a small fraction of HIV-exposed infants in low- and middle-income countries are tested for the disease. The gold standard for early infant diagnosis, DNA PCR, requires resources that are unavailable in poor settings, and no point-of-care HIV DNA test is currently available. We have developed a device constructed of layers of paper, glass fiber, and plastic that is capable of performing isothermal, enzymatic amplification of HIV DNA. The device is inexpensive, small, light-weight, and easy to assemble. The device stores lyophilized enzymes, facilitates mixing of reaction components, and supports recombinase polymerase amplification in five steps of operation. Using commercially available lateral flow strips as a detection method, we demonstrate the ability of our device to amplify 10 copies of HIV DNA to detectable levels in 15 min. Our results suggest that our device, which is designed to be used after DNA extraction from dried-blood spots, may serve in conjunction with lateral flow strips as part of a point-of-care HIV DNA test to be used in low resource settings.

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Year:  2012        PMID: 22733333      PMCID: PMC3569001          DOI: 10.1039/c2lc40423k

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  25 in total

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2.  Understanding wax printing: a simple micropatterning process for paper-based microfluidics.

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Journal:  Lab Chip       Date:  2008-10-24       Impact factor: 6.799

4.  Quantitative biomarker assay with microfluidic paper-based analytical devices.

Authors:  Xu Li; Junfei Tian; Wei Shen
Journal:  Anal Bioanal Chem       Date:  2009-10-18       Impact factor: 4.142

Review 5.  Miniaturized isothermal nucleic acid amplification, a review.

Authors:  Peter J Asiello; Antje J Baeumner
Journal:  Lab Chip       Date:  2011-03-09       Impact factor: 6.799

6.  Dried blood spots improve access to HIV diagnosis and care for infants in low-resource settings.

Authors:  Gayle G Sherman; Gwynneth Stevens; Stephanie A Jones; Pamela Horsfield; Wendy S Stevens
Journal:  J Acquir Immune Defic Syndr       Date:  2005-04-15       Impact factor: 3.731

7.  Evaluation of a manual DNA extraction protocol and an isothermal amplification assay for detecting HIV-1 DNA from dried blood spots for use in resource-limited settings.

Authors:  Jeanne A Jordan; Christine O Ibe; Miranda S Moore; Christel Host; Gary L Simon
Journal:  J Clin Virol       Date:  2012-01-30       Impact factor: 3.168

8.  Controlled reagent transport in disposable 2D paper networks.

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Journal:  Lab Chip       Date:  2010-01-15       Impact factor: 6.799

9.  Early antiretroviral therapy and mortality among HIV-infected infants.

Authors:  Avy Violari; Mark F Cotton; Diana M Gibb; Abdel G Babiker; Jan Steyn; Shabir A Madhi; Patrick Jean-Philippe; James A McIntyre
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10.  A polymer lab-on-a-chip for reverse transcription (RT)-PCR based point-of-care clinical diagnostics.

Authors:  Soo Hyun Lee; Sung-Woo Kim; Ji Yoon Kang; Chong H Ahn
Journal:  Lab Chip       Date:  2008-10-31       Impact factor: 6.799

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Authors:  M Tijero; R Díez-Ahedo; F Benito-Lopez; L Basabe-Desmonts; V Castro-López; A Valero
Journal:  Biomicrofluidics       Date:  2015-08-26       Impact factor: 2.800

Review 2.  Celiac disease: from etiological factors to evolving diagnostic approaches.

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Journal:  J Gastroenterol       Date:  2017-06-19       Impact factor: 7.527

3.  Smart-phone based computational microscopy using multi-frame contact imaging on a fiber-optic array.

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Journal:  Lab Chip       Date:  2013-08-12       Impact factor: 6.799

4.  Development of a quantitative recombinase polymerase amplification assay with an internal positive control.

Authors:  Zachary A Crannell; Brittany Rohrman; Rebecca Richards-Kortum
Journal:  J Vis Exp       Date:  2015-03-30       Impact factor: 1.355

5.  Profile of Rebecca Richards-Kortum.

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-24       Impact factor: 11.205

6.  Early detection of dengue virus by use of reverse transcription-recombinase polymerase amplification.

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Journal:  J Clin Microbiol       Date:  2015-01-07       Impact factor: 5.948

7.  Multiplex isothermal solid-phase recombinase polymerase amplification for the specific and fast DNA-based detection of three bacterial pathogens.

Authors:  Sebastian Kersting; Valentina Rausch; Frank F Bier; Markus von Nickisch-Rosenegk
Journal:  Mikrochim Acta       Date:  2014-02-18       Impact factor: 5.833

8.  Portable platform for rapid in-field identification of human fecal pollution in water.

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9.  Polyethersulfone improves isothermal nucleic acid amplification compared to current paper-based diagnostics.

Authors:  J C Linnes; N M Rodriguez; L Liu; C M Klapperich
Journal:  Biomed Microdevices       Date:  2016-04       Impact factor: 2.838

10.  Development of a panel of recombinase polymerase amplification assays for detection of common bacterial urinary tract infection pathogens.

Authors:  B Raja; H J Goux; A Marapadaga; S Rajagopalan; K Kourentzi; R C Willson
Journal:  J Appl Microbiol       Date:  2017-08       Impact factor: 3.772

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