Literature DB >> 22726691

Draft genome of Omphalotus olearius provides a predictive framework for sesquiterpenoid natural product biosynthesis in Basidiomycota.

Grayson T Wawrzyn1, Maureen B Quin, Swati Choudhary, Fernando López-Gallego, Claudia Schmidt-Dannert.   

Abstract

The secondary metabolome of Basidiomycota represents a largely uncharacterized source of pharmaceutically relevant natural products. Terpenoids are the primary class of bioactive compounds isolated from mushrooms. The Jack O'Lantern mushroom Omphalotus olearius was identified 50 years ago as a prolific producer of anticancer illudin sesquiterpenoids; however, to date there have been exceptionally few studies into the biosynthesis of these important compounds. Here, we report the draft genome sequence of O. olearius, which reveals a diverse network of sesquiterpene synthases and two metabolic gene clusters associated with illudin biosynthesis. Characterization of the sesquiterpene synthases enabled a comprehensive survey of all currently available Basidiomycota genomes, thereby creating a predictive resource for terpenoid natural product biosynthesis in these organisms. Our results will facilitate discovery and biosynthetic production of unique pharmaceutically relevant bioactive compounds from Basidiomycota.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22726691      PMCID: PMC3383649          DOI: 10.1016/j.chembiol.2012.05.012

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  51 in total

Review 1.  Anticancer active illudins: recent developments of a potent alkylating compound class.

Authors:  R Schobert; S Knauer; S Seibt; B Biersack
Journal:  Curr Med Chem       Date:  2011       Impact factor: 4.530

2.  Selectivity of fungal sesquiterpene synthases: role of the active site's H-1 alpha loop in catalysis.

Authors:  Fernando López-Gallego; Grayson T Wawrzyn; Claudia Schmidt-Dannert
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

3.  On the mechanism of toxicity of illudins: the role of glutathione.

Authors:  T C McMorris; M J Kelner; W Wang; S Moon; R Taetle
Journal:  Chem Res Toxicol       Date:  1990 Nov-Dec       Impact factor: 3.739

4.  The fungi: 1, 2, 3 ... 5.1 million species?

Authors:  Meredith Blackwell
Journal:  Am J Bot       Date:  2011-03-02       Impact factor: 3.844

5.  Identification of alternative splice variants in Aspergillus flavus through comparison of multiple tandem MS search algorithms.

Authors:  Kung-Yen Chang; David C Muddiman
Journal:  BMC Genomics       Date:  2011-07-11       Impact factor: 3.969

6.  A multiproduct terpene synthase from Medicago truncatula generates cadalane sesquiterpenes via two different mechanisms.

Authors:  Stefan Garms; Tobias G Köllner; Wilhelm Boland
Journal:  J Org Chem       Date:  2010-08-20       Impact factor: 4.354

Review 7.  Ganoderma - a therapeutic fungal biofactory.

Authors:  R Russell M Paterson
Journal:  Phytochemistry       Date:  2006-08-14       Impact factor: 4.072

Review 8.  Cytochromes P450: exploiting diversity and enabling application as biocatalysts.

Authors:  Gideon Grogan
Journal:  Curr Opin Chem Biol       Date:  2010-12-07       Impact factor: 8.822

9.  Metabolites of Clitocybe illudens. IV. Illudalic acid, a sesquiterpenoid, and illudinine, a sesquiterpenoid alkaloid.

Authors:  M S Nair; H Takeshita; T C McMorris; M Anchel
Journal:  J Org Chem       Date:  1969-01       Impact factor: 4.354

10.  Cloning and characterization of an Armillaria gallica cDNA encoding protoilludene synthase, which catalyzes the first committed step in the synthesis of antimicrobial melleolides.

Authors:  Benedikt Engels; Uwe Heinig; Torsten Grothe; Marc Stadler; Stefan Jennewein
Journal:  J Biol Chem       Date:  2010-12-10       Impact factor: 5.157

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  44 in total

1.  Purification, crystallization and preliminary X-ray diffraction analysis of Omp6, a protoilludene synthase from Omphalotus olearius.

Authors:  Maureen B Quin; Grayson Wawrzyn; Claudia Schmidt-Dannert
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-04-30

2.  Sesquiterpene Synthase-3-Hydroxy-3-Methylglutaryl Coenzyme A Synthase Fusion Protein Responsible for Hirsutene Biosynthesis in Stereum hirsutum.

Authors:  Christopher M Flynn; Claudia Schmidt-Dannert
Journal:  Appl Environ Microbiol       Date:  2018-05-17       Impact factor: 4.792

3.  Identification of a fungal 1,8-cineole synthase from Hypoxylon sp. with specificity determinants in common with the plant synthases.

Authors:  Jeffrey J Shaw; Tetyana Berbasova; Tomoaki Sasaki; Kyra Jefferson-George; Daniel J Spakowicz; Brian F Dunican; Carolina E Portero; Alexandra Narváez-Trujillo; Scott A Strobel
Journal:  J Biol Chem       Date:  2015-02-03       Impact factor: 5.157

4.  Ascomycete Aspergillus oryzae Is an Efficient Expression Host for Production of Basidiomycete Terpenes by Using Genomic DNA Sequences.

Authors:  Shota Nagamine; Chengwei Liu; Jumpei Nishishita; Takuto Kozaki; Kaho Sogahata; Yoshiro Sato; Atsushi Minami; Taro Ozaki; Claudia Schmidt-Dannert; Jun-Ichi Maruyama; Hideaki Oikawa
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

5.  Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.

Authors:  Robert Riley; Asaf A Salamov; Daren W Brown; Laszlo G Nagy; Dimitrios Floudas; Benjamin W Held; Anthony Levasseur; Vincent Lombard; Emmanuelle Morin; Robert Otillar; Erika A Lindquist; Hui Sun; Kurt M LaButti; Jeremy Schmutz; Dina Jabbour; Hong Luo; Scott E Baker; Antonio G Pisabarro; Jonathan D Walton; Robert A Blanchette; Bernard Henrissat; Francis Martin; Dan Cullen; David S Hibbett; Igor V Grigoriev
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-23       Impact factor: 11.205

6.  Lentinula edodes Genome Survey and Postharvest Transcriptome Analysis.

Authors:  Yuichi Sakamoto; Keiko Nakade; Shiho Sato; Kentaro Yoshida; Kazuhiro Miyazaki; Satoshi Natsume; Naotake Konno
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

7.  Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii.

Authors:  Dimitrios Floudas; Benjamin W Held; Robert Riley; Laszlo G Nagy; Gage Koehler; Anthony S Ransdell; Hina Younus; Julianna Chow; Jennifer Chiniquy; Anna Lipzen; Andrew Tritt; Hui Sun; Sajeet Haridas; Kurt LaButti; Robin A Ohm; Ursula Kües; Robert A Blanchette; Igor V Grigoriev; Robert E Minto; David S Hibbett
Journal:  Fungal Genet Biol       Date:  2015-02-12       Impact factor: 3.495

8.  Draft genomic sequence of Armillaria gallica 012m: insights into its symbiotic relationship with Gastrodia elata.

Authors:  Mengtao Zhan; Menghua Tian; Weiguang Wang; Ganpeng Li; Xiaokai Lu; Guolei Cai; Haiying Yang; Gang Du; Lishuxin Huang
Journal:  Braz J Microbiol       Date:  2020-06-22       Impact factor: 2.476

9.  Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway.

Authors:  Jose Guedes de Sena Filho; Maureen B Quin; Daniel J Spakowicz; Jeffrey J Shaw; Kaury Kucera; Brian Dunican; Scott A Strobel; Claudia Schmidt-Dannert
Journal:  Fungal Biol       Date:  2016-04-12

Review 10.  Traversing the fungal terpenome.

Authors:  Maureen B Quin; Christopher M Flynn; Claudia Schmidt-Dannert
Journal:  Nat Prod Rep       Date:  2014-10       Impact factor: 13.423

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