Literature DB >> 22725642

Quantitative synthesis of genetically encoded glycopeptide libraries displayed on M13 phage.

Simon Ng1, Mohammad R Jafari, Wadim L Matochko, Ratmir Derda.   

Abstract

Phage display is a powerful technology that enables the discovery of peptide ligands for many targets. Chemical modification of phage libraries have allowed the identification of ligands with properties not encountered in natural polypeptides. In this report, we demonstrated the synthesis of 2 × 10(8) genetically encoded glycopeptides from a commercially available phage-displayed peptide library (Ph.D.-7) in a two-step, one-pot reaction in <1.5 h. Unlike previous reports, we bypassed genetic engineering of phage. The glycan moiety was introduced via an oxime ligation following oxidation of an N-terminal Ser/Thr; these residues are present in the peptide libraries at 20-30% abundance. The construction of libraries was facilitated by simple characterization, which directly assessed the yield and regioselectivity of chemical reactions performed on phage. This quantification method also allowed facile yield determination of reactions in 10(9) distinct molecules. We envision that the methodology described herein will find broad application in the synthesis of custom chemically modified phage libraries.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22725642     DOI: 10.1021/cb300187t

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  24 in total

Review 1.  Hitting Undruggable Targets: Viewing Stabilized Peptide Development through the Lens of Quantitative Systems Pharmacology.

Authors:  Lydia Atangcho; Tejas Navaratna; Greg M Thurber
Journal:  Trends Biochem Sci       Date:  2018-12-15       Impact factor: 13.807

2.  A platform for constructing, evaluating, and screening bioconjugates on the yeast surface.

Authors:  James A Van Deventer; Doris N Le; Jessie Zhao; Haixing P Kehoe; Ryan L Kelly
Journal:  Protein Eng Des Sel       Date:  2016-11-01       Impact factor: 1.650

3.  Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteins.

Authors:  Simon Ng; Edith Lin; Pavel I Kitov; Katrina F Tjhung; Oksana O Gerlits; Lu Deng; Brian Kasper; Amika Sood; Beth M Paschal; Ping Zhang; Chang-Chun Ling; John S Klassen; Christopher J Noren; Lara K Mahal; Robert J Woods; Leighton Coates; Ratmir Derda
Journal:  J Am Chem Soc       Date:  2015-04-16       Impact factor: 15.419

4.  Fast and Stable N-Terminal Cysteine Modification through Thiazolidino Boronate Mediated Acyl Transfer.

Authors:  Kaicheng Li; Wenjian Wang; Jianmin Gao
Journal:  Angew Chem Int Ed Engl       Date:  2020-07-02       Impact factor: 15.336

5.  Parallel Glyco-SPOT Synthesis of Glycopeptide Libraries.

Authors:  Akul Y Mehta; Ravi Kumar H Veeraiah; Sucharita Dutta; Christoffer K Goth; Melinda S Hanes; Chao Gao; Kathrin Stavenhagen; Robert Kardish; Yasuyuki Matsumoto; Jamie Heimburg-Molinaro; Michael Boyce; Nicola L B Pohl; Richard D Cummings
Journal:  Cell Chem Biol       Date:  2020-06-30       Impact factor: 8.116

6.  Genetically-encoded discovery of proteolytically stable bicyclic inhibitors for morphogen NODAL.

Authors:  Jeffrey Y-K Wong; Raja Mukherjee; Jiayuan Miao; Olena Bilyk; Vivian Triana; Mark Miskolzie; Antoine Henninot; John J Dwyer; Serhii Kharchenko; Anna Iampolska; Dmitriy M Volochnyuk; Yu-Shan Lin; Lynne-Marie Postovit; Ratmir Derda
Journal:  Chem Sci       Date:  2021-06-17       Impact factor: 9.825

7.  N-Terminal labeling of filamentous phage to create cancer marker imaging agents.

Authors:  Zachary M Carrico; Michelle E Farkas; Yu Zhou; Sonny C Hsiao; James D Marks; Harshal Chokhawala; Douglas S Clark; Matthew B Francis
Journal:  ACS Nano       Date:  2012-08-06       Impact factor: 15.881

Review 8.  Chemically Modifying Viruses for Diverse Applications.

Authors:  Kritika Mohan; Gregory A Weiss
Journal:  ACS Chem Biol       Date:  2016-03-21       Impact factor: 5.100

Review 9.  Molecular Sensing with Host Systems for Hyperpolarized 129Xe.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Molecules       Date:  2020-10-11       Impact factor: 4.411

10.  Peptide Probes of Colistin Resistance Discovered via Chemically Enhanced Phage Display.

Authors:  Michael Kelly; Samantha Cambray; Kelly A McCarthy; Wenjian Wang; Edward Geisinger; Juan Ortiz-Marquez; Tim van Opijnen; Jianmin Gao
Journal:  ACS Infect Dis       Date:  2020-08-19       Impact factor: 5.084

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.