Literature DB >> 22724394

Grains of connectivity: analysis at multiple spatial scales in landscape genetics.

Paul Galpern1, Micheline Manseau, Paul Wilson.   

Abstract

Landscape genetic analyses are typically conducted at one spatial scale. Considering multiple scales may be essential for identifying landscape features influencing gene flow. We examined landscape connectivity for woodland caribou (Rangifer tarandus caribou) at multiple spatial scales using a new approach based on landscape graphs that creates a Voronoi tessellation of the landscape. To illustrate the potential of the method, we generated five resistance surfaces to explain how landscape pattern may influence gene flow across the range of this population. We tested each resistance surface using a raster at the spatial grain of available landscape data (200 m grid squares). We then used our method to produce up to 127 additional grains for each resistance surface. We applied a causal modelling framework with partial Mantel tests, where evidence of landscape resistance is tested against an alternative hypothesis of isolation-by-distance, and found statistically significant support for landscape resistance to gene flow in 89 of the 507 spatial grains examined. We found evidence that major roads as well as the cumulative effects of natural and anthropogenic disturbance may be contributing to the genetic structure. Using only the original grid surface yielded no evidence for landscape resistance to gene flow. Our results show that using multiple spatial grains can reveal landscape influences on genetic structure that may be overlooked with a single grain, and suggest that coarsening the grain of landcover data may be appropriate for highly mobile species. We discuss how grains of connectivity and related analyses have potential landscape genetic applications in a broad range of systems.
© 2012 Blackwell Publishing Ltd.

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Year:  2012        PMID: 22724394     DOI: 10.1111/j.1365-294X.2012.05677.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  11 in total

1.  Expert-based versus habitat-suitability models to develop resistance surfaces in landscape genetics.

Authors:  Pietro Milanesi; R Holderegger; R Caniglia; E Fabbri; M Galaverni; E Randi
Journal:  Oecologia       Date:  2016-10-11       Impact factor: 3.225

2.  Landscape influences on dispersal behaviour: a theoretical model and empirical test using the fire salamander, Salamandra infraimmaculata.

Authors:  Arik Kershenbaum; Lior Blank; Iftach Sinai; Juha Merilä; Leon Blaustein; Alan R Templeton
Journal:  Oecologia       Date:  2014-03-20       Impact factor: 3.225

3.  Fine-scale landscape genetics of the American badger (Taxidea taxus): disentangling landscape effects and sampling artifacts in a poorly understood species.

Authors:  E M Kierepka; E K Latch
Journal:  Heredity (Edinb)       Date:  2015-08-05       Impact factor: 3.821

4.  Dispersal analysis of three Peltigera species based on landscape genetics data.

Authors:  Daniel N Anstett; Heath O'Brien; Ellen W Larsen; R Troy McMullin; Marie-Josée Fortin
Journal:  Mycology       Date:  2014-01-03

5.  Assessing the permeability of landscape features to animal movement: using genetic structure to infer functional connectivity.

Authors:  Sara J Anderson; Elizabeth M Kierepka; Robert K Swihart; Emily K Latch; Olin E Rhodes
Journal:  PLoS One       Date:  2015-02-26       Impact factor: 3.240

6.  Multi-scale and multi-site resampling of a study area in spatial genetics: implications for flying insect species.

Authors:  Julien M Haran; Jean-Pierre Rossi; Juan Pajares; Luis Bonifacio; Pedro Naves; Alain Roques; Géraldine Roux
Journal:  PeerJ       Date:  2017-12-15       Impact factor: 2.984

7.  Spatial familial networks to infer demographic structure of wild populations.

Authors:  Samantha McFarlane; Micheline Manseau; Paul J Wilson
Journal:  Ecol Evol       Date:  2021-03-17       Impact factor: 2.912

8.  Multiscale patterns of isolation by ecology and fine-scale population structure in Texas bobcats.

Authors:  Imogene A Cancellare; Elizabeth M Kierepka; Jan Janecka; Byron Weckworth; Richard T Kazmaier; Rocky Ward
Journal:  PeerJ       Date:  2021-06-03       Impact factor: 2.984

9.  Spatial genetic analyses reveal cryptic population structure and migration patterns in a continuously harvested grey wolf (Canis lupus) population in north-eastern Europe.

Authors:  Maris Hindrikson; Jaanus Remm; Peep Männil; Janis Ozolins; Egle Tammeleht; Urmas Saarma
Journal:  PLoS One       Date:  2013-09-19       Impact factor: 3.240

10.  The sensitivity of genetic connectivity measures to unsampled and under-sampled sites.

Authors:  Erin L Koen; Jeff Bowman; Colin J Garroway; Paul J Wilson
Journal:  PLoS One       Date:  2013-02-08       Impact factor: 3.240

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