Literature DB >> 22719839

Gene transcription and splicing of T-type channels are evolutionarily-conserved strategies for regulating channel expression and gating.

Adriano Senatore1, J David Spafford.   

Abstract

T-type calcium channels operate within tightly regulated biophysical constraints for supporting rhythmic firing in the brain, heart and secretory organs of invertebrates and vertebrates. The snail T-type gene, LCa(v)3 from Lymnaea stagnalis, possesses alternative, tandem donor splice sites enabling a choice of a large exon 8b (201 aa) or a short exon 25c (9 aa) in cytoplasmic linkers, similar to mammalian homologs. Inclusion of optional 25c exons in the III-IV linker of T-type channels speeds up kinetics and causes hyperpolarizing shifts in both activation and steady-state inactivation of macroscopic currents. The abundant variant lacking exon 25c is the workhorse of embryonic Ca(v)3 channels, whose high density and right-shifted activation and availability curves are expected to increase pace-making and allow the channels to contribute more significantly to cellular excitation in prenatal tissue. Presence of brain-enriched, optional exon 8b conserved with mammalian Ca(v)3.1 and encompassing the proximal half of the I-II linker, imparts a ~50% reduction in total and surface-expressed LCa(v)3 channel protein, which accounts for reduced whole-cell calcium currents of +8b variants in HEK cells. Evolutionarily conserved optional exons in cytoplasmic linkers of Ca(v)3 channels regulate expression (exon 8b) and a battery of biophysical properties (exon 25c) for tuning specialized firing patterns in different tissues and throughout development.

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Year:  2012        PMID: 22719839      PMCID: PMC3376122          DOI: 10.1371/journal.pone.0037409

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  47 in total

1.  Alternatively spliced alpha(1G) (Ca(V)3.1) intracellular loops promote specific T-type Ca(2+) channel gating properties.

Authors:  J Chemin; A Monteil; E Bourinet; J Nargeot; P Lory
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Molecular and functional characterization of a family of rat brain T-type calcium channels.

Authors:  J E McRory; C M Santi; K S Hamming; J Mezeyova; K G Sutton; D L Baillie; A Stea; T P Snutch
Journal:  J Biol Chem       Date:  2000-11-09       Impact factor: 5.157

3.  Juvenile Lymnaea ventilate, learn and remember differently than do adult Lymnaea.

Authors:  Chloe McComb; Nishi Varshney; Ken Lukowiak
Journal:  J Exp Biol       Date:  2005-04       Impact factor: 3.312

4.  A profile of alternative RNA splicing and transcript variation of CACNA1H, a human T-channel gene candidate for idiopathic generalized epilepsies.

Authors:  Xiaoli Zhong; Jinrong R Liu; John W Kyle; Dorothy A Hanck; William S Agnew
Journal:  Hum Mol Genet       Date:  2006-03-24       Impact factor: 6.150

5.  Expression and modulation of an invertebrate presynaptic calcium channel alpha1 subunit homolog.

Authors:  J David Spafford; Lina Chen; Zhong-Ping Feng; August B Smit; Gerald W Zamponi
Journal:  J Biol Chem       Date:  2003-04-02       Impact factor: 5.157

6.  Separate sodium and calcium spikes in the same axon.

Authors:  G O Mackie; R W Meech
Journal:  Nature       Date:  1985 Feb 28-Mar 6       Impact factor: 49.962

Review 7.  Functional consequences of developmentally regulated alternative splicing.

Authors:  Auinash Kalsotra; Thomas A Cooper
Journal:  Nat Rev Genet       Date:  2011-09-16       Impact factor: 53.242

8.  Expression of T-type calcium channel splice variants in human glioma.

Authors:  Isabelle Latour; Deon F Louw; Aaron M Beedle; Jawed Hamid; Garnette R Sutherland; Gerald W Zamponi
Journal:  Glia       Date:  2004-11-01       Impact factor: 7.452

9.  Acceleration of human myoblast fusion by depolarization: graded Ca2+ signals involved.

Authors:  Jian-Hui Liu; Stéphane König; Marlène Michel; Serge Arnaudeau; Jacqueline Fischer-Lougheed; Charles R Bader; Laurent Bernheim
Journal:  Development       Date:  2003-08       Impact factor: 6.868

10.  I-II loop structural determinants in the gating and surface expression of low voltage-activated calcium channels.

Authors:  Joel P Baumgart; Iuliia Vitko; Isabelle Bidaud; Artem Kondratskyi; Philippe Lory; Edward Perez-Reyes
Journal:  PLoS One       Date:  2008-08-20       Impact factor: 3.240

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  18 in total

1.  A uniquely adaptable pore is consistent with NALCN being an ion sensor.

Authors:  Adriano Senatore; J David Spafford
Journal:  Channels (Austin)       Date:  2013-02-26       Impact factor: 2.581

2.  T-type channels become highly permeable to sodium ions using an alternative extracellular turret region (S5-P) outside the selectivity filter.

Authors:  Adriano Senatore; Wendy Guan; Adrienne N Boone; J David Spafford
Journal:  J Biol Chem       Date:  2014-03-04       Impact factor: 5.157

Review 3.  Cav3 T-type channels: regulators for gating, membrane expression, and cation selectivity.

Authors:  A Senatore; W Guan; J D Spafford
Journal:  Pflugers Arch       Date:  2014-02-11       Impact factor: 3.657

4.  Cav3.2 T-type calcium channel is required for the NFAT-dependent Sox9 expression in tracheal cartilage.

Authors:  Shin-Shiou Lin; Bing-Hsiean Tzeng; Kuan-Rong Lee; Richard J H Smith; Kevin P Campbell; Chien-Chang Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

Review 5.  T-type calcium channels in chronic pain: mouse models and specific blockers.

Authors:  Amaury François; Sophie Laffray; Anne Pizzoccaro; Alain Eschalier; Emmanuel Bourinet
Journal:  Pflugers Arch       Date:  2014-03-04       Impact factor: 3.657

6.  The calmodulin-binding, short linear motif, NSCaTE is conserved in L-type channel ancestors of vertebrate Cav1.2 and Cav1.3 channels.

Authors:  Valentina Taiakina; Adrienne N Boone; Julia Fux; Adriano Senatore; Danielle Weber-Adrian; J Guy Guillemette; J David Spafford
Journal:  PLoS One       Date:  2013-04-23       Impact factor: 3.240

Review 7.  Selectivity filters and cysteine-rich extracellular loops in voltage-gated sodium, calcium, and NALCN channels.

Authors:  Robert F Stephens; W Guan; Boris S Zhorov; J David Spafford
Journal:  Front Physiol       Date:  2015-05-19       Impact factor: 4.566

8.  NALCN ion channels have alternative selectivity filters resembling calcium channels or sodium channels.

Authors:  Adriano Senatore; Arnaud Monteil; Jan van Minnen; August B Smit; J David Spafford
Journal:  PLoS One       Date:  2013-01-28       Impact factor: 3.240

9.  Voltage-gated calcium channel antagonists and traumatic brain injury.

Authors:  Gene Gurkoff; Kiarash Shahlaie; Bruce Lyeth; Robert Berman
Journal:  Pharmaceuticals (Basel)       Date:  2013-06-26

10.  Gene splicing of an invertebrate beta subunit (LCavβ) in the N-terminal and HOOK domains and its regulation of LCav1 and LCav2 calcium channels.

Authors:  Taylor F Dawson; Adrienne N Boone; Adriano Senatore; Joshua Piticaru; Shano Thiyagalingam; Daniel Jackson; Angus Davison; J David Spafford
Journal:  PLoS One       Date:  2014-04-01       Impact factor: 3.240

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