Literature DB >> 22719720

(E)-3-(2-Eth-oxy-phen-yl)-1-{4-[(2-fluoro-phen-yl)(4-fluoro-phen-yl)meth-yl]piperazin-1-yl}prop-2-en-1-one.

Yan Zhong, Bin Wu.   

Abstract

In the title compound, C(28)H(28)F(2)N(2)O(2), the piperazine ring has a chair conformation with the pendant N-C bonds in equatorial orientations. The C=C double bond has an E conformation and the dihedral angle between the fluoro-benzene rings is 70.8 (3)°. In the crystal, mol-ecules are linked by C-H⋯O and C-H⋯F hydrogen bonds.

Entities:  

Year:  2012        PMID: 22719720      PMCID: PMC3379522          DOI: 10.1107/S1600536812024130

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to cinnamic acid derivatives, see: Teng et al. (2011 ▶); Zhong et al. (2012 ▶). For further synthetic details, see: Wu et al. (2008 ▶).

Experimental

Crystal data

C28H28F2N2O2 M = 462.52 Orthorhombic, a = 8.8550 (18) Å b = 12.827 (3) Å c = 22.432 (5) Å V = 2547.9 (9) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.975, T max = 0.992 5217 measured reflections 2677 independent reflections 1328 reflections with I > 2σ(I) R int = 0.092 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.160 S = 1.00 2677 reflections 307 parameters 1 restraint H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.12 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812024130/hb6812sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024130/hb6812Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024130/hb6812Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H28F2N2O2Dx = 1.206 Mg m3
Mr = 462.52Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 25 reflections
a = 8.8550 (18) Åθ = 9–13°
b = 12.827 (3) ŵ = 0.09 mm1
c = 22.432 (5) ÅT = 293 K
V = 2547.9 (9) Å3Block, colorless
Z = 40.30 × 0.20 × 0.10 mm
F(000) = 976
Enraf–Nonius CAD-4 diffractometer1328 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.092
Graphite monochromatorθmax = 25.5°, θmin = 1.8°
ω/2θ scansh = 0→10
Absorption correction: ψ scan (North et al., 1968)k = 0→15
Tmin = 0.975, Tmax = 0.992l = −27→27
5217 measured reflections3 standard reflections every 200 reflections
2677 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.160H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.063P)2] where P = (Fo2 + 2Fc2)/3
2677 reflections(Δ/σ)max < 0.001
307 parametersΔρmax = 0.23 e Å3
1 restraintΔρmin = −0.12 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7258 (5)0.3977 (2)0.63108 (15)0.0891 (11)
N10.7411 (6)0.0370 (2)0.69576 (16)0.0739 (10)
F11.0297 (5)−0.2050 (3)0.6989 (2)0.1490 (16)
C10.8192 (7)−0.0465 (4)0.7234 (2)0.0846 (16)
H1A0.9274−0.03830.71540.102*
O20.7460 (6)0.6004 (3)0.46140 (16)0.1160 (13)
F20.7518 (6)−0.0447 (3)0.97218 (14)0.1447 (15)
N20.6907 (7)0.2261 (3)0.63068 (19)0.113 (2)
C20.7675 (8)−0.1522 (3)0.6976 (2)0.0780 (15)
C30.6258 (10)−0.1824 (6)0.6896 (3)0.109 (2)
H3A0.5466−0.13670.69720.131*
C40.5969 (12)−0.2819 (9)0.6698 (3)0.140 (3)
H4A0.4976−0.30380.66470.168*
C50.7119 (15)−0.3482 (4)0.6578 (3)0.132 (4)
H5A0.6893−0.41500.64430.159*
C60.8589 (12)−0.3209 (8)0.6649 (4)0.146 (4)
H6A0.9384−0.36560.65590.175*
C70.8803 (9)−0.2219 (7)0.6862 (3)0.105 (2)
C80.7955 (9)−0.0479 (4)0.7912 (3)0.0894 (18)
C90.9141 (8)−0.0567 (5)0.8273 (4)0.105 (2)
H9A1.0092−0.06540.81040.126*
C100.9031 (10)−0.0537 (6)0.8849 (4)0.111 (2)
H10A0.9901−0.05600.90810.133*
C110.7695 (11)−0.0476 (4)0.9110 (3)0.0878 (16)
C120.6397 (8)−0.0441 (5)0.8813 (3)0.1040 (19)
H12A0.5471−0.04320.90080.125*
C130.6508 (8)−0.0417 (5)0.8162 (3)0.0949 (18)
H13A0.5652−0.03630.79240.114*
C140.7528 (7)0.0413 (3)0.6316 (2)0.0761 (13)
H14A0.7235−0.02560.61520.091*
H14B0.85740.05360.62080.091*
C150.6571 (8)0.1243 (4)0.6045 (2)0.101 (2)
H15A0.67510.12680.56180.121*
H15B0.55140.10770.61080.121*
C160.6743 (8)0.2221 (4)0.6953 (2)0.106 (2)
H16A0.70910.28730.71240.127*
H16B0.56840.21400.70530.127*
C170.7575 (8)0.1385 (3)0.7205 (2)0.0914 (17)
H17A0.73100.13440.76240.110*
H17B0.86370.15680.71840.110*
C180.7198 (8)0.3163 (4)0.6033 (2)0.0939 (19)
C190.7188 (7)0.3198 (4)0.5371 (2)0.0975 (19)
H19A0.71150.25750.51600.117*
C200.7279 (7)0.4064 (3)0.5076 (2)0.0801 (14)
H20A0.73120.46690.53040.096*
C210.7336 (6)0.4210 (3)0.4434 (2)0.0707 (12)
C220.7270 (9)0.3415 (4)0.4028 (2)0.102 (2)
H22A0.71670.27380.41700.123*
C230.7348 (8)0.3568 (5)0.3411 (3)0.1042 (17)
H23A0.73310.30050.31500.125*
C240.7448 (7)0.4536 (5)0.3208 (2)0.0986 (17)
H24A0.74950.46500.27990.118*
C250.7485 (7)0.5382 (4)0.3591 (2)0.0975 (16)
H25A0.75400.60550.34380.117*
C260.7439 (7)0.5228 (4)0.4206 (2)0.0794 (13)
C270.7553 (18)0.7032 (5)0.4448 (3)0.213 (5)
H27A0.66880.72170.42050.255*
H27B0.84610.71450.42140.255*
C280.759 (2)0.7692 (5)0.4994 (5)0.269 (8)
H28A0.77020.84100.48820.403*
H28B0.84280.74870.52390.403*
H28C0.66670.76030.52120.403*
U11U22U33U12U13U23
O10.134 (3)0.0448 (16)0.088 (2)−0.009 (2)−0.015 (3)0.0009 (17)
N10.129 (3)0.0314 (16)0.061 (2)0.001 (3)−0.015 (3)0.0062 (15)
F10.148 (3)0.102 (3)0.197 (4)0.038 (3)0.015 (3)0.023 (3)
C10.126 (4)0.059 (3)0.069 (3)0.017 (3)0.009 (3)−0.001 (3)
O20.209 (4)0.0492 (18)0.090 (2)0.002 (3)0.014 (4)0.0069 (18)
F20.249 (4)0.117 (2)0.068 (2)0.020 (4)−0.015 (3)0.0211 (18)
N20.238 (6)0.0337 (19)0.067 (3)0.002 (3)−0.012 (3)0.0035 (19)
C20.127 (5)0.042 (2)0.065 (3)0.003 (4)0.000 (4)0.004 (2)
C30.145 (6)0.099 (5)0.083 (4)0.012 (5)0.009 (5)−0.019 (4)
C40.189 (8)0.134 (8)0.098 (6)−0.044 (7)−0.042 (5)0.021 (6)
C50.288 (13)0.036 (3)0.072 (4)0.000 (6)−0.044 (7)0.007 (3)
C60.217 (10)0.113 (7)0.108 (6)0.111 (7)−0.026 (7)−0.020 (5)
C70.127 (5)0.120 (6)0.068 (4)0.027 (5)0.016 (4)0.018 (4)
C80.152 (6)0.041 (2)0.075 (4)0.015 (3)0.004 (4)0.011 (2)
C90.119 (5)0.071 (4)0.124 (7)−0.006 (4)−0.011 (5)−0.008 (4)
C100.152 (7)0.094 (5)0.088 (5)−0.003 (5)−0.026 (5)−0.015 (4)
C110.131 (5)0.057 (3)0.076 (4)0.007 (4)−0.019 (5)0.013 (3)
C120.121 (5)0.080 (4)0.110 (6)0.007 (4)−0.006 (5)0.008 (4)
C130.129 (5)0.068 (3)0.087 (5)0.028 (4)−0.029 (4)0.002 (4)
C140.124 (4)0.040 (2)0.064 (3)0.016 (3)0.010 (3)−0.001 (2)
C150.176 (6)0.061 (3)0.066 (3)−0.004 (4)−0.013 (3)0.002 (3)
C160.211 (7)0.055 (3)0.050 (3)0.017 (4)−0.006 (4)−0.001 (3)
C170.163 (5)0.045 (2)0.066 (3)−0.042 (4)−0.015 (4)−0.001 (2)
C180.172 (6)0.041 (2)0.069 (3)0.016 (4)−0.025 (4)−0.002 (2)
C190.173 (6)0.047 (2)0.073 (3)0.001 (4)0.010 (4)0.001 (2)
C200.120 (4)0.047 (2)0.073 (3)0.000 (3)−0.001 (3)0.010 (2)
C210.089 (3)0.056 (3)0.067 (3)−0.007 (3)−0.003 (3)0.007 (2)
C220.162 (6)0.062 (3)0.083 (4)−0.001 (4)−0.038 (5)−0.002 (3)
C230.135 (5)0.084 (4)0.094 (4)0.002 (4)0.001 (5)−0.008 (3)
C240.121 (4)0.095 (4)0.080 (3)0.027 (5)0.011 (4)−0.006 (3)
C250.136 (4)0.078 (3)0.078 (3)0.006 (5)0.015 (4)0.025 (3)
C260.106 (4)0.060 (3)0.072 (3)0.007 (4)0.001 (4)0.009 (2)
C270.456 (17)0.060 (4)0.122 (6)−0.052 (9)−0.010 (10)0.022 (4)
C280.60 (2)0.067 (4)0.137 (7)−0.016 (10)−0.001 (13)−0.008 (5)
O1—C181.216 (5)C13—H13A0.9300
N1—C11.417 (6)C14—C151.490 (7)
N1—C171.423 (5)C14—H14A0.9700
N1—C141.444 (6)C14—H14B0.9700
F1—C71.371 (8)C15—H15A0.9700
C1—C81.536 (7)C15—H15B0.9700
C1—C21.545 (7)C16—C171.417 (7)
C1—H1A0.9800C16—H16A0.9700
O2—C261.351 (6)C16—H16B0.9700
O2—C271.374 (7)C17—H17A0.9700
F2—C111.383 (7)C17—H17B0.9700
N2—C181.335 (7)C18—C191.488 (7)
N2—C161.458 (6)C19—C201.296 (6)
N2—C151.463 (7)C19—H19A0.9300
C2—C31.325 (9)C20—C211.452 (6)
C2—C71.365 (9)C20—H20A0.9300
C3—C41.375 (12)C21—C221.368 (7)
C3—H3A0.9300C21—C261.406 (6)
C4—C51.354 (13)C22—C231.401 (7)
C4—H4A0.9300C22—H22A0.9300
C5—C61.358 (12)C23—C241.325 (8)
C5—H5A0.9300C23—H23A0.9300
C6—C71.370 (12)C24—C251.385 (7)
C6—H6A0.9300C24—H24A0.9300
C8—C91.331 (8)C25—C261.394 (7)
C8—C131.401 (9)C25—H25A0.9300
C9—C101.296 (8)C27—C281.489 (11)
C9—H9A0.9300C27—H27A0.9700
C10—C111.323 (9)C27—H27B0.9700
C10—H10A0.9300C28—H28A0.9600
C11—C121.328 (8)C28—H28B0.9600
C12—C131.463 (8)C28—H28C0.9600
C12—H12A0.9300
C1—N1—C17118.1 (4)N2—C15—H15A109.5
C1—N1—C14115.4 (4)C14—C15—H15A109.5
C17—N1—C14110.2 (3)N2—C15—H15B109.5
N1—C1—C8112.0 (4)C14—C15—H15B109.5
N1—C1—C2110.8 (4)H15A—C15—H15B108.0
C8—C1—C2108.7 (4)C17—C16—N2111.8 (5)
N1—C1—H1A108.4C17—C16—H16A109.3
C8—C1—H1A108.4N2—C16—H16A109.3
C2—C1—H1A108.4C17—C16—H16B109.3
C26—O2—C27121.6 (5)N2—C16—H16B109.3
C18—N2—C16120.4 (4)H16A—C16—H16B107.9
C18—N2—C15129.0 (4)C16—C17—N1118.9 (5)
C16—N2—C15110.4 (4)C16—C17—H17A107.6
C3—C2—C7118.5 (6)N1—C17—H17A107.6
C3—C2—C1126.0 (6)C16—C17—H17B107.6
C7—C2—C1115.3 (6)N1—C17—H17B107.6
C2—C3—C4119.4 (7)H17A—C17—H17B107.0
C2—C3—H3A120.3O1—C18—N2121.2 (4)
C4—C3—H3A120.3O1—C18—C19119.1 (4)
C5—C4—C3120.5 (9)N2—C18—C19118.9 (4)
C5—C4—H4A119.7C20—C19—C18122.4 (5)
C3—C4—H4A119.7C20—C19—H19A118.8
C4—C5—C6122.4 (8)C18—C19—H19A118.8
C4—C5—H5A118.8C19—C20—C21128.2 (5)
C6—C5—H5A118.8C19—C20—H20A115.9
C5—C6—C7114.4 (7)C21—C20—H20A115.9
C5—C6—H6A122.8C22—C21—C26116.9 (4)
C7—C6—H6A122.8C22—C21—C20124.2 (4)
C2—C7—C6124.8 (8)C26—C21—C20118.9 (4)
C2—C7—F1124.3 (7)C21—C22—C23123.5 (5)
C6—C7—F1110.7 (8)C21—C22—H22A118.3
C9—C8—C13118.9 (6)C23—C22—H22A118.3
C9—C8—C1119.7 (7)C24—C23—C22118.3 (6)
C13—C8—C1121.4 (6)C24—C23—H23A120.8
C10—C9—C8123.0 (7)C22—C23—H23A120.8
C10—C9—H9A118.5C23—C24—C25121.5 (5)
C8—C9—H9A118.5C23—C24—H24A119.3
C9—C10—C11120.7 (7)C25—C24—H24A119.3
C9—C10—H10A119.7C24—C25—C26120.2 (5)
C11—C10—H10A119.7C24—C25—H25A119.9
C10—C11—C12123.6 (6)C26—C25—H25A119.9
C10—C11—F2122.9 (7)O2—C26—C25124.4 (4)
C12—C11—F2113.5 (8)O2—C26—C21116.0 (4)
C11—C12—C13116.3 (6)C25—C26—C21119.6 (5)
C11—C12—H12A121.9O2—C27—C28108.9 (6)
C13—C12—H12A121.9O2—C27—H27A109.9
C8—C13—C12117.4 (6)C28—C27—H27A109.9
C8—C13—H13A121.3O2—C27—H27B109.9
C12—C13—H13A121.3C28—C27—H27B109.9
N1—C14—C15113.2 (4)H27A—C27—H27B108.3
N1—C14—H14A108.9C27—C28—H28A109.5
C15—C14—H14A108.9C27—C28—H28B109.5
N1—C14—H14B108.9H28A—C28—H28B109.5
C15—C14—H14B108.9C27—C28—H28C109.5
H14A—C14—H14B107.8H28A—C28—H28C109.5
N2—C15—C14110.9 (5)H28B—C28—H28C109.5
C17—N1—C1—C848.9 (7)C1—N1—C14—C15174.5 (5)
C14—N1—C1—C8−177.6 (5)C17—N1—C14—C15−48.4 (7)
C17—N1—C1—C2170.4 (5)C18—N2—C15—C14130.6 (7)
C14—N1—C1—C2−56.1 (6)C16—N2—C15—C14−55.2 (8)
N1—C1—C2—C3−47.6 (8)N1—C14—C15—N255.0 (7)
C8—C1—C2—C375.9 (7)C18—N2—C16—C17−133.4 (7)
N1—C1—C2—C7137.0 (5)C15—N2—C16—C1751.8 (8)
C8—C1—C2—C7−99.5 (6)N2—C16—C17—N1−49.8 (9)
C7—C2—C3—C4−0.4 (10)C1—N1—C17—C16−176.9 (6)
C1—C2—C3—C4−175.6 (6)C14—N1—C17—C1647.4 (8)
C2—C3—C4—C5−0.9 (11)C16—N2—C18—O1−3.7 (11)
C3—C4—C5—C60.4 (12)C15—N2—C18—O1170.0 (7)
C4—C5—C6—C71.3 (12)C16—N2—C18—C19−173.2 (6)
C3—C2—C7—C62.4 (10)C15—N2—C18—C190.5 (11)
C1—C2—C7—C6178.1 (7)O1—C18—C19—C201.8 (11)
C3—C2—C7—F1−172.3 (6)N2—C18—C19—C20171.5 (7)
C1—C2—C7—F13.4 (8)C18—C19—C20—C21177.6 (6)
C5—C6—C7—C2−2.8 (12)C19—C20—C21—C221.4 (11)
C5—C6—C7—F1172.5 (7)C19—C20—C21—C26−179.8 (7)
N1—C1—C8—C9−131.1 (6)C26—C21—C22—C232.1 (11)
C2—C1—C8—C9106.2 (7)C20—C21—C22—C23−179.0 (7)
N1—C1—C8—C1349.9 (7)C21—C22—C23—C24−2.0 (13)
C2—C1—C8—C13−72.9 (7)C22—C23—C24—C250.4 (12)
C13—C8—C9—C10−4.2 (10)C23—C24—C25—C260.9 (11)
C1—C8—C9—C10176.8 (6)C27—O2—C26—C25−1.0 (12)
C8—C9—C10—C113.9 (12)C27—O2—C26—C21−179.8 (9)
C9—C10—C11—C120.0 (11)C24—C25—C26—O2−179.6 (6)
C9—C10—C11—F2179.7 (6)C24—C25—C26—C21−0.8 (11)
C10—C11—C12—C13−3.2 (9)C22—C21—C26—O2178.2 (6)
F2—C11—C12—C13177.1 (5)C20—C21—C26—O2−0.7 (9)
C9—C8—C13—C120.7 (9)C22—C21—C26—C25−0.7 (10)
C1—C8—C13—C12179.8 (5)C20—C21—C26—C25−179.6 (6)
C11—C12—C13—C82.7 (9)C26—O2—C27—C28−178.7 (11)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O1i0.932.443.316 (6)156
C15—H15A···F2ii0.972.363.241 (6)150
C25—H25A···F1iii0.932.553.166 (7)124
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5A⋯O1i0.932.443.316 (6)156
C15—H15A⋯F2ii0.972.363.241 (6)150
C25—H25A⋯F1iii0.932.553.166 (7)124

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-1-{4-[Bis(4-meth-oxy-phen-yl)meth-yl]piperazin-1-yl}-3-(4-fluoro-phen-yl)prop-2-en-1-one.

Authors:  Yan-Bo Teng; Zhao-Hui Dai; Bin Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-23

3.  (E)-1-{4-[Bis(4-meth-oxy-phen-yl)meth-yl]piperazin-1-yl}-3-(3,4-dieth-oxy-phen-yl)prop-2-en-1-one ethanol disolvate.

Authors:  Yan Zhong; Xiaoping Zhang; Bin Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-07
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.