| Literature DB >> 22719703 |
Bakr F Abdel-Wahab, Ehab Abdel-Latif, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C(20)H(19)FN(6)S, theEntities:
Year: 2012 PMID: 22719703 PMCID: PMC3379505 DOI: 10.1107/S1600536812024245
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H19FN6S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3598 reflections |
| θ = 2.2–27.5° | |
| µ = 0.19 mm−1 | |
| β = 91.288 (4)° | Prism, light-brown |
| 0.40 × 0.30 × 0.20 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 4551 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 3809 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 2.5° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 7765 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4551 reflections | (Δ/σ)max = 0.002 |
| 263 parameters | Δρmax = 0.64 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.32997 (4) | 1.28074 (6) | 0.507140 (13) | 0.01661 (12) | |
| F1 | −0.23235 (10) | 1.32770 (17) | 0.39047 (3) | 0.0253 (3) | |
| N1 | 0.53882 (15) | 1.2902 (2) | 0.45302 (5) | 0.0181 (3) | |
| N2 | 0.38250 (13) | 1.0266 (2) | 0.44567 (4) | 0.0137 (3) | |
| N3 | 0.45951 (13) | 0.9562 (2) | 0.41184 (4) | 0.0145 (3) | |
| N4 | 0.40790 (15) | 0.4715 (2) | 0.35943 (5) | 0.0212 (3) | |
| N5 | 0.47668 (16) | 0.3904 (2) | 0.32855 (5) | 0.0224 (3) | |
| N6 | 0.57249 (14) | 0.5319 (2) | 0.31626 (4) | 0.0161 (3) | |
| C1 | 0.42324 (16) | 1.1970 (2) | 0.46636 (5) | 0.0139 (3) | |
| C2 | 0.25153 (16) | 0.9101 (2) | 0.45166 (5) | 0.0139 (3) | |
| H2 | 0.2393 | 0.8789 | 0.4818 | 0.017* | |
| C3 | 0.28474 (17) | 0.7137 (3) | 0.42742 (5) | 0.0162 (3) | |
| H3A | 0.3146 | 0.6017 | 0.4463 | 0.019* | |
| H3B | 0.2023 | 0.6684 | 0.4102 | 0.019* | |
| C4 | 0.40479 (16) | 0.7836 (3) | 0.40082 (5) | 0.0145 (3) | |
| C5 | 0.12296 (16) | 1.0241 (2) | 0.43419 (5) | 0.0136 (3) | |
| C6 | 0.13589 (17) | 1.1894 (3) | 0.40729 (5) | 0.0170 (3) | |
| H6 | 0.2272 | 1.2330 | 0.3992 | 0.020* | |
| C7 | 0.01603 (17) | 1.2911 (3) | 0.39217 (5) | 0.0183 (4) | |
| H7 | 0.0241 | 1.4039 | 0.3738 | 0.022* | |
| C8 | −0.11438 (17) | 1.2240 (3) | 0.40457 (5) | 0.0177 (4) | |
| C9 | −0.13193 (17) | 1.0592 (3) | 0.43024 (5) | 0.0200 (4) | |
| H9 | −0.2238 | 1.0148 | 0.4376 | 0.024* | |
| C10 | −0.01149 (17) | 0.9592 (3) | 0.44518 (5) | 0.0176 (3) | |
| H10 | −0.0210 | 0.8450 | 0.4631 | 0.021* | |
| C11 | 0.45981 (17) | 0.6634 (3) | 0.36697 (5) | 0.0157 (3) | |
| C12 | 0.56581 (17) | 0.7042 (3) | 0.33933 (5) | 0.0158 (3) | |
| C13 | 0.65699 (19) | 0.8859 (3) | 0.33351 (6) | 0.0245 (4) | |
| H13A | 0.6911 | 0.8880 | 0.3049 | 0.037* | |
| H13B | 0.7380 | 0.8799 | 0.3531 | 0.037* | |
| H13C | 0.6021 | 1.0100 | 0.3387 | 0.037* | |
| C14 | 0.66475 (17) | 0.4832 (3) | 0.28258 (5) | 0.0167 (3) | |
| C15 | 0.77454 (18) | 0.3469 (3) | 0.28951 (5) | 0.0204 (4) | |
| H15 | 0.7917 | 0.2913 | 0.3165 | 0.025* | |
| C16 | 0.85941 (19) | 0.2924 (3) | 0.25663 (6) | 0.0229 (4) | |
| H16 | 0.9354 | 0.1995 | 0.2613 | 0.027* | |
| C17 | 0.83530 (18) | 0.3714 (3) | 0.21690 (5) | 0.0207 (4) | |
| C18 | 0.72555 (19) | 0.5103 (3) | 0.21112 (6) | 0.0260 (4) | |
| H18 | 0.7092 | 0.5685 | 0.1844 | 0.031* | |
| C19 | 0.63922 (19) | 0.5658 (3) | 0.24361 (5) | 0.0234 (4) | |
| H19 | 0.5635 | 0.6594 | 0.2391 | 0.028* | |
| C20 | 0.9250 (2) | 0.3050 (3) | 0.18119 (6) | 0.0324 (5) | |
| H20A | 1.0108 | 0.2375 | 0.1920 | 0.049* | |
| H20B | 0.9514 | 0.4247 | 0.1648 | 0.049* | |
| H20C | 0.8710 | 0.2096 | 0.1635 | 0.049* | |
| H1N | 0.5662 (19) | 1.407 (3) | 0.4648 (6) | 0.020 (5)* | |
| H2N | 0.574 (2) | 1.255 (3) | 0.4297 (7) | 0.027 (6)* |
| S1 | 0.0194 (2) | 0.0157 (2) | 0.0149 (2) | −0.00300 (17) | 0.00448 (15) | −0.00283 (16) |
| F1 | 0.0177 (5) | 0.0359 (6) | 0.0223 (5) | 0.0063 (5) | −0.0003 (4) | 0.0081 (5) |
| N1 | 0.0174 (7) | 0.0180 (8) | 0.0191 (8) | −0.0041 (6) | 0.0050 (6) | −0.0068 (6) |
| N2 | 0.0125 (6) | 0.0151 (7) | 0.0137 (7) | −0.0008 (5) | 0.0024 (5) | −0.0030 (6) |
| N3 | 0.0149 (6) | 0.0154 (7) | 0.0132 (7) | 0.0016 (6) | 0.0022 (5) | −0.0015 (6) |
| N4 | 0.0287 (8) | 0.0162 (7) | 0.0190 (7) | −0.0038 (6) | 0.0068 (6) | −0.0044 (6) |
| N5 | 0.0291 (8) | 0.0177 (7) | 0.0208 (8) | −0.0071 (6) | 0.0080 (6) | −0.0044 (6) |
| N6 | 0.0203 (7) | 0.0133 (7) | 0.0147 (7) | −0.0028 (6) | 0.0027 (5) | −0.0007 (6) |
| C1 | 0.0145 (7) | 0.0131 (8) | 0.0141 (8) | 0.0020 (6) | −0.0026 (6) | 0.0011 (6) |
| C2 | 0.0159 (8) | 0.0118 (7) | 0.0142 (8) | −0.0031 (6) | 0.0014 (6) | 0.0004 (6) |
| C3 | 0.0180 (8) | 0.0137 (8) | 0.0170 (8) | −0.0008 (7) | 0.0025 (6) | −0.0006 (7) |
| C4 | 0.0155 (7) | 0.0143 (8) | 0.0138 (8) | 0.0019 (6) | 0.0001 (6) | 0.0013 (6) |
| C5 | 0.0153 (7) | 0.0136 (8) | 0.0121 (7) | −0.0015 (6) | 0.0011 (6) | −0.0023 (6) |
| C6 | 0.0150 (8) | 0.0186 (8) | 0.0174 (8) | −0.0042 (7) | 0.0019 (6) | −0.0003 (7) |
| C7 | 0.0204 (8) | 0.0179 (8) | 0.0166 (8) | −0.0010 (7) | 0.0004 (6) | 0.0041 (7) |
| C8 | 0.0148 (8) | 0.0230 (9) | 0.0152 (8) | 0.0036 (7) | −0.0012 (6) | 0.0003 (7) |
| C9 | 0.0142 (8) | 0.0270 (10) | 0.0189 (8) | −0.0034 (7) | 0.0033 (6) | 0.0027 (7) |
| C10 | 0.0182 (8) | 0.0187 (8) | 0.0161 (8) | −0.0029 (7) | 0.0017 (6) | 0.0021 (7) |
| C11 | 0.0180 (8) | 0.0132 (8) | 0.0157 (8) | −0.0006 (6) | 0.0001 (6) | −0.0010 (6) |
| C12 | 0.0188 (8) | 0.0137 (8) | 0.0150 (8) | 0.0003 (7) | 0.0000 (6) | −0.0032 (7) |
| C13 | 0.0273 (9) | 0.0177 (9) | 0.0290 (10) | −0.0070 (8) | 0.0093 (8) | −0.0067 (8) |
| C14 | 0.0204 (8) | 0.0151 (8) | 0.0148 (8) | −0.0022 (7) | 0.0033 (6) | −0.0033 (7) |
| C15 | 0.0252 (9) | 0.0213 (9) | 0.0148 (8) | 0.0012 (7) | 0.0008 (7) | 0.0016 (7) |
| C16 | 0.0236 (9) | 0.0239 (9) | 0.0214 (9) | 0.0059 (8) | 0.0021 (7) | 0.0015 (8) |
| C17 | 0.0239 (9) | 0.0207 (9) | 0.0177 (8) | 0.0020 (7) | 0.0039 (7) | −0.0039 (7) |
| C18 | 0.0330 (10) | 0.0292 (10) | 0.0158 (9) | 0.0075 (8) | 0.0030 (7) | 0.0024 (8) |
| C19 | 0.0272 (9) | 0.0240 (9) | 0.0192 (9) | 0.0104 (8) | 0.0020 (7) | 0.0019 (8) |
| C20 | 0.0372 (11) | 0.0379 (12) | 0.0223 (10) | 0.0130 (9) | 0.0089 (8) | 0.0000 (9) |
| S1—C1 | 1.6873 (17) | C7—C8 | 1.374 (2) |
| F1—C8 | 1.3724 (19) | C7—H7 | 0.9500 |
| N1—C1 | 1.329 (2) | C8—C9 | 1.371 (2) |
| N1—H1N | 0.89 (2) | C9—C10 | 1.389 (2) |
| N1—H2N | 0.86 (2) | C9—H9 | 0.9500 |
| N2—C1 | 1.350 (2) | C10—H10 | 0.9500 |
| N2—N3 | 1.3996 (18) | C11—C12 | 1.379 (2) |
| N2—C2 | 1.469 (2) | C12—C13 | 1.483 (2) |
| N3—C4 | 1.289 (2) | C13—H13A | 0.9800 |
| N4—N5 | 1.311 (2) | C13—H13B | 0.9800 |
| N4—C11 | 1.368 (2) | C13—H13C | 0.9800 |
| N5—N6 | 1.360 (2) | C14—C19 | 1.381 (2) |
| N6—C12 | 1.352 (2) | C14—C15 | 1.382 (2) |
| N6—C14 | 1.441 (2) | C15—C16 | 1.387 (2) |
| C2—C5 | 1.521 (2) | C15—H15 | 0.9500 |
| C2—C3 | 1.539 (2) | C16—C17 | 1.392 (2) |
| C2—H2 | 1.0000 | C16—H16 | 0.9500 |
| C3—C4 | 1.506 (2) | C17—C18 | 1.388 (3) |
| C3—H3A | 0.9900 | C17—C20 | 1.505 (2) |
| C3—H3B | 0.9900 | C18—C19 | 1.387 (2) |
| C4—C11 | 1.449 (2) | C18—H18 | 0.9500 |
| C5—C10 | 1.391 (2) | C19—H19 | 0.9500 |
| C5—C6 | 1.392 (2) | C20—H20A | 0.9800 |
| C6—C7 | 1.391 (2) | C20—H20B | 0.9800 |
| C6—H6 | 0.9500 | C20—H20C | 0.9800 |
| C1—N1—H1N | 119.3 (12) | C8—C9—C10 | 118.08 (15) |
| C1—N1—H2N | 119.6 (14) | C8—C9—H9 | 121.0 |
| H1N—N1—H2N | 119.4 (19) | C10—C9—H9 | 121.0 |
| C1—N2—N3 | 120.50 (13) | C9—C10—C5 | 120.82 (16) |
| C1—N2—C2 | 126.55 (13) | C9—C10—H10 | 119.6 |
| N3—N2—C2 | 112.60 (12) | C5—C10—H10 | 119.6 |
| C4—N3—N2 | 106.88 (13) | N4—C11—C12 | 109.01 (14) |
| N5—N4—C11 | 108.96 (14) | N4—C11—C4 | 119.94 (15) |
| N4—N5—N6 | 106.73 (13) | C12—C11—C4 | 131.01 (16) |
| C12—N6—N5 | 111.69 (13) | N6—C12—C11 | 103.62 (14) |
| C12—N6—C14 | 129.31 (14) | N6—C12—C13 | 124.45 (15) |
| N5—N6—C14 | 119.00 (13) | C11—C12—C13 | 131.93 (16) |
| N1—C1—N2 | 116.57 (15) | C12—C13—H13A | 109.5 |
| N1—C1—S1 | 123.20 (13) | C12—C13—H13B | 109.5 |
| N2—C1—S1 | 120.23 (12) | H13A—C13—H13B | 109.5 |
| N2—C2—C5 | 111.32 (13) | C12—C13—H13C | 109.5 |
| N2—C2—C3 | 100.70 (12) | H13A—C13—H13C | 109.5 |
| C5—C2—C3 | 113.13 (13) | H13B—C13—H13C | 109.5 |
| N2—C2—H2 | 110.4 | C19—C14—C15 | 120.95 (16) |
| C5—C2—H2 | 110.4 | C19—C14—N6 | 119.95 (15) |
| C3—C2—H2 | 110.4 | C15—C14—N6 | 119.05 (15) |
| C4—C3—C2 | 101.42 (13) | C14—C15—C16 | 119.14 (16) |
| C4—C3—H3A | 111.5 | C14—C15—H15 | 120.4 |
| C2—C3—H3A | 111.5 | C16—C15—H15 | 120.4 |
| C4—C3—H3B | 111.5 | C15—C16—C17 | 121.23 (17) |
| C2—C3—H3B | 111.5 | C15—C16—H16 | 119.4 |
| H3A—C3—H3B | 109.3 | C17—C16—H16 | 119.4 |
| N3—C4—C11 | 122.33 (15) | C18—C17—C16 | 118.19 (16) |
| N3—C4—C3 | 114.34 (14) | C18—C17—C20 | 121.20 (17) |
| C11—C4—C3 | 123.26 (15) | C16—C17—C20 | 120.61 (16) |
| C10—C5—C6 | 119.23 (15) | C19—C18—C17 | 121.34 (17) |
| C10—C5—C2 | 118.75 (15) | C19—C18—H18 | 119.3 |
| C6—C5—C2 | 122.02 (14) | C17—C18—H18 | 119.3 |
| C7—C6—C5 | 120.48 (15) | C14—C19—C18 | 119.14 (17) |
| C7—C6—H6 | 119.8 | C14—C19—H19 | 120.4 |
| C5—C6—H6 | 119.8 | C18—C19—H19 | 120.4 |
| C8—C7—C6 | 118.18 (16) | C17—C20—H20A | 109.5 |
| C8—C7—H7 | 120.9 | C17—C20—H20B | 109.5 |
| C6—C7—H7 | 120.9 | H20A—C20—H20B | 109.5 |
| C9—C8—F1 | 118.69 (14) | C17—C20—H20C | 109.5 |
| C9—C8—C7 | 123.19 (16) | H20A—C20—H20C | 109.5 |
| F1—C8—C7 | 118.12 (15) | H20B—C20—H20C | 109.5 |
| C1—N2—N3—C4 | 174.29 (14) | C6—C5—C10—C9 | −1.1 (3) |
| C2—N2—N3—C4 | −12.04 (17) | C2—C5—C10—C9 | 179.58 (15) |
| C11—N4—N5—N6 | −0.27 (19) | N5—N4—C11—C12 | 0.2 (2) |
| N4—N5—N6—C12 | 0.23 (19) | N5—N4—C11—C4 | −177.76 (15) |
| N4—N5—N6—C14 | 179.55 (14) | N3—C4—C11—N4 | 172.91 (15) |
| N3—N2—C1—N1 | −0.5 (2) | C3—C4—C11—N4 | −3.8 (2) |
| C2—N2—C1—N1 | −173.19 (15) | N3—C4—C11—C12 | −4.6 (3) |
| N3—N2—C1—S1 | −179.93 (11) | C3—C4—C11—C12 | 178.72 (17) |
| C2—N2—C1—S1 | 7.3 (2) | N5—N6—C12—C11 | −0.08 (18) |
| C1—N2—C2—C5 | 72.6 (2) | C14—N6—C12—C11 | −179.32 (16) |
| N3—N2—C2—C5 | −100.65 (15) | N5—N6—C12—C13 | 179.88 (16) |
| C1—N2—C2—C3 | −167.24 (15) | C14—N6—C12—C13 | 0.6 (3) |
| N3—N2—C2—C3 | 19.54 (16) | N4—C11—C12—N6 | −0.08 (18) |
| N2—C2—C3—C4 | −18.17 (15) | C4—C11—C12—N6 | 177.61 (17) |
| C5—C2—C3—C4 | 100.72 (15) | N4—C11—C12—C13 | 179.96 (18) |
| N2—N3—C4—C11 | −178.76 (14) | C4—C11—C12—C13 | −2.4 (3) |
| N2—N3—C4—C3 | −1.78 (18) | C12—N6—C14—C19 | −76.7 (2) |
| C2—C3—C4—N3 | 13.53 (18) | N5—N6—C14—C19 | 104.1 (2) |
| C2—C3—C4—C11 | −169.51 (15) | C12—N6—C14—C15 | 106.0 (2) |
| N2—C2—C5—C10 | −165.88 (14) | N5—N6—C14—C15 | −73.2 (2) |
| C3—C2—C5—C10 | 81.57 (18) | C19—C14—C15—C16 | −0.3 (3) |
| N2—C2—C5—C6 | 14.8 (2) | N6—C14—C15—C16 | 176.99 (16) |
| C3—C2—C5—C6 | −97.72 (18) | C14—C15—C16—C17 | −0.4 (3) |
| C10—C5—C6—C7 | 1.2 (2) | C15—C16—C17—C18 | 1.4 (3) |
| C2—C5—C6—C7 | −179.49 (15) | C15—C16—C17—C20 | −177.77 (18) |
| C5—C6—C7—C8 | 0.1 (3) | C16—C17—C18—C19 | −1.7 (3) |
| C6—C7—C8—C9 | −1.6 (3) | C20—C17—C18—C19 | 177.47 (19) |
| C6—C7—C8—F1 | 178.40 (15) | C15—C14—C19—C18 | 0.0 (3) |
| F1—C8—C9—C10 | −178.27 (15) | N6—C14—C19—C18 | −177.25 (16) |
| C7—C8—C9—C10 | 1.7 (3) | C17—C18—C19—C14 | 1.0 (3) |
| C8—C9—C10—C5 | −0.3 (3) |
| H··· | ||||
| N1—H1 | 0.89 (2) | 2.432 (19) | 3.3159 (14) | 172.7 (16) |
| N1—H2 | 0.86 (2) | 2.29 (2) | 2.9940 (18) | 138.9 (17) |
| N1—H2 | 0.86 (2) | 2.30 (2) | 2.6554 (19) | 104.9 (15) |
| C3—H3 | 0.99 | 2.87 | 3.8390 (19) | 166 |
| C9—H9···S1iv | 0.95 | 2.83 | 3.5595 (18) | 135 |
| C15—H15···F1v | 0.95 | 2.41 | 3.2502 (19) | 148 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1N⋯S1i | 0.89 (2) | 2.432 (19) | 3.3159 (14) | 172.7 (16) |
| N1—H2N⋯F1ii | 0.86 (2) | 2.29 (2) | 2.9940 (18) | 138.9 (17) |
| N1—H2N⋯N3 | 0.86 (2) | 2.30 (2) | 2.6554 (19) | 104.9 (15) |
| C3—H3 | 0.99 | 2.87 | 3.8390 (19) | 166 |
| C9—H9⋯S1iv | 0.95 | 2.83 | 3.5595 (18) | 135 |
| C15—H15⋯F1v | 0.95 | 2.41 | 3.2502 (19) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .