| Literature DB >> 22719632 |
Shaghayegh Pezeshkpour1, Hamid Khaledi, Hapipah Mohd Ali.
Abstract
In the thio-carbonohydrazide mol-ecule of the title compound, C(17)H(12)N(6)O(2)S·C(4)H(8)O, the terminal indolin-2-one ring systems make a dihedral angle of 20.13 (6)° with each other. Two intra-molecular N-H⋯O hydrogen bonds are present, each of which generates an S(6) ring. In the crystal, N-H⋯O hydrogen bonds lead to a mol-ecular chain running along the b axis. The tetra-hydro-furan solvent mol-ecule is disordered over two orientations in a 0.561 (11):0.439 (11) ratio.Entities:
Year: 2012 PMID: 22719632 PMCID: PMC3379434 DOI: 10.1107/S1600536812022714
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H12N6O2S·C4H8O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4598 reflections | |
| θ = 2.4–29.1° | |
| µ = 0.20 mm−1 | |
| α = 75.206 (1)° | |
| β = 72.553 (1)° | Block, yellow |
| γ = 69.416 (1)° | 0.33 × 0.25 × 0.13 mm |
| Bruker APEXII CCD diffractometer | 4451 independent reflections |
| Radiation source: fine-focus sealed tube | 3628 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.0°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 9421 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4451 reflections | (Δ/σ)max = 0.001 |
| 338 parameters | Δρmax = 0.20 e Å−3 |
| 30 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.05012 (6) | 0.21013 (4) | 0.21038 (4) | 0.05637 (15) | |
| O1 | 0.25587 (17) | −0.15327 (11) | 0.48629 (10) | 0.0564 (3) | |
| O2 | 0.20530 (16) | 0.44464 (11) | 0.49172 (9) | 0.0529 (3) | |
| N1 | 0.38131 (19) | −0.19240 (13) | 0.64563 (12) | 0.0498 (3) | |
| H1 | 0.402 (2) | −0.2746 (14) | 0.6651 (16) | 0.060* | |
| N2 | 0.21787 (17) | 0.11827 (12) | 0.49897 (11) | 0.0435 (3) | |
| N3 | 0.16236 (18) | 0.11149 (12) | 0.40644 (12) | 0.0455 (3) | |
| H3 | 0.163 (2) | 0.0406 (14) | 0.3970 (16) | 0.055* | |
| N4 | 0.13631 (18) | 0.32009 (11) | 0.34784 (11) | 0.0437 (3) | |
| H4 | 0.167 (2) | 0.3167 (17) | 0.4115 (13) | 0.052* | |
| N5 | 0.11499 (16) | 0.42919 (11) | 0.26740 (11) | 0.0411 (3) | |
| N6 | 0.18651 (18) | 0.64925 (12) | 0.39333 (11) | 0.0470 (3) | |
| H6 | 0.217 (2) | 0.6750 (18) | 0.4406 (15) | 0.056* | |
| C1 | 0.3000 (2) | −0.11911 (14) | 0.55902 (13) | 0.0448 (3) | |
| C2 | 0.2764 (2) | 0.01502 (14) | 0.56776 (13) | 0.0417 (3) | |
| C3 | 0.3419 (2) | 0.00786 (15) | 0.66947 (13) | 0.0442 (3) | |
| C4 | 0.3523 (3) | 0.09899 (18) | 0.72112 (17) | 0.0617 (5) | |
| H4A | 0.3114 | 0.1843 | 0.6909 | 0.074* | |
| C5 | 0.4251 (3) | 0.0596 (2) | 0.81909 (18) | 0.0709 (5) | |
| H5 | 0.4332 | 0.1193 | 0.8555 | 0.085* | |
| C6 | 0.4860 (3) | −0.0675 (2) | 0.86359 (16) | 0.0634 (5) | |
| H6A | 0.5342 | −0.0916 | 0.9297 | 0.076* | |
| C7 | 0.4769 (2) | −0.15979 (17) | 0.81209 (14) | 0.0542 (4) | |
| H7 | 0.5184 | −0.2451 | 0.8421 | 0.065* | |
| C8 | 0.4042 (2) | −0.11990 (15) | 0.71482 (13) | 0.0441 (3) | |
| C9 | 0.1173 (2) | 0.21704 (14) | 0.32405 (13) | 0.0423 (3) | |
| C10 | 0.1806 (2) | 0.52963 (14) | 0.40708 (13) | 0.0425 (3) | |
| C11 | 0.13649 (18) | 0.52272 (13) | 0.29545 (12) | 0.0388 (3) | |
| C12 | 0.12560 (19) | 0.64527 (13) | 0.21980 (13) | 0.0399 (3) | |
| C13 | 0.0978 (2) | 0.69308 (15) | 0.10567 (13) | 0.0469 (4) | |
| H13 | 0.0746 | 0.6448 | 0.0641 | 0.056* | |
| C14 | 0.1054 (2) | 0.81390 (16) | 0.05535 (15) | 0.0558 (4) | |
| H14 | 0.0881 | 0.8473 | −0.0213 | 0.067* | |
| C15 | 0.1386 (3) | 0.88613 (16) | 0.11776 (17) | 0.0600 (5) | |
| H15 | 0.1432 | 0.9674 | 0.0820 | 0.072* | |
| C16 | 0.1649 (2) | 0.84010 (15) | 0.23188 (16) | 0.0544 (4) | |
| H16 | 0.1860 | 0.8891 | 0.2737 | 0.065* | |
| C17 | 0.1587 (2) | 0.71911 (14) | 0.28141 (13) | 0.0426 (3) | |
| O3 | 0.446 (3) | 0.5472 (16) | 0.7408 (9) | 0.054 (3) | 0.561 (11) |
| C18 | 0.3597 (15) | 0.4754 (11) | 0.7110 (8) | 0.073 (3) | 0.561 (11) |
| H18C | 0.4432 | 0.4071 | 0.6710 | 0.087* | 0.561 (11) |
| H18D | 0.2833 | 0.5288 | 0.6592 | 0.087* | 0.561 (11) |
| C19 | 0.2583 (7) | 0.4248 (5) | 0.8281 (7) | 0.0748 (19) | 0.561 (11) |
| H19C | 0.2449 | 0.3451 | 0.8256 | 0.090* | 0.561 (11) |
| H19D | 0.1447 | 0.4843 | 0.8505 | 0.090* | 0.561 (11) |
| C20 | 0.3706 (7) | 0.4076 (5) | 0.9136 (5) | 0.0656 (13) | 0.561 (11) |
| H20C | 0.3065 | 0.4015 | 0.9963 | 0.079* | 0.561 (11) |
| H20D | 0.4731 | 0.3351 | 0.9042 | 0.079* | 0.561 (11) |
| C21 | 0.4135 (17) | 0.5314 (11) | 0.8674 (8) | 0.062 (2) | 0.561 (11) |
| H21C | 0.3172 | 0.6007 | 0.8976 | 0.075* | 0.561 (11) |
| H21D | 0.5151 | 0.5278 | 0.8914 | 0.075* | 0.561 (11) |
| O3' | 0.471 (3) | 0.545 (2) | 0.7353 (11) | 0.049 (2) | 0.439 (11) |
| C18' | 0.3702 (17) | 0.5049 (11) | 0.6829 (10) | 0.058 (2) | 0.439 (11) |
| H18A | 0.4341 | 0.4837 | 0.6047 | 0.070* | 0.439 (11) |
| H18B | 0.2623 | 0.5705 | 0.6754 | 0.070* | 0.439 (11) |
| C19' | 0.3368 (12) | 0.3903 (7) | 0.7693 (8) | 0.078 (2) | 0.439 (11) |
| H19A | 0.4385 | 0.3170 | 0.7618 | 0.094* | 0.439 (11) |
| H19B | 0.2398 | 0.3711 | 0.7591 | 0.094* | 0.439 (11) |
| C20' | 0.2948 (18) | 0.4357 (11) | 0.8886 (8) | 0.109 (4) | 0.439 (11) |
| H20A | 0.1763 | 0.4895 | 0.9079 | 0.131* | 0.439 (11) |
| H20B | 0.3140 | 0.3652 | 0.9535 | 0.131* | 0.439 (11) |
| C21' | 0.4234 (19) | 0.5088 (14) | 0.8621 (11) | 0.062 (3) | 0.439 (11) |
| H21A | 0.3714 | 0.5832 | 0.9000 | 0.074* | 0.439 (11) |
| H21B | 0.5249 | 0.4567 | 0.8922 | 0.074* | 0.439 (11) |
| S1 | 0.0781 (3) | 0.0465 (2) | 0.0592 (3) | −0.0176 (2) | −0.0398 (2) | −0.00685 (18) |
| O1 | 0.0811 (8) | 0.0489 (6) | 0.0550 (7) | −0.0291 (6) | −0.0329 (6) | −0.0013 (5) |
| O2 | 0.0720 (8) | 0.0532 (6) | 0.0403 (6) | −0.0235 (6) | −0.0238 (5) | 0.0002 (5) |
| N1 | 0.0666 (9) | 0.0398 (7) | 0.0513 (8) | −0.0214 (6) | −0.0276 (7) | 0.0027 (6) |
| N2 | 0.0528 (7) | 0.0407 (6) | 0.0406 (6) | −0.0147 (5) | −0.0171 (5) | −0.0045 (5) |
| N3 | 0.0621 (8) | 0.0359 (6) | 0.0462 (7) | −0.0167 (6) | −0.0251 (6) | −0.0024 (5) |
| N4 | 0.0616 (8) | 0.0368 (6) | 0.0390 (6) | −0.0157 (6) | −0.0221 (6) | −0.0031 (5) |
| N5 | 0.0518 (7) | 0.0361 (6) | 0.0380 (6) | −0.0123 (5) | −0.0171 (5) | −0.0041 (5) |
| N6 | 0.0634 (8) | 0.0460 (7) | 0.0417 (7) | −0.0197 (6) | −0.0196 (6) | −0.0108 (5) |
| C1 | 0.0539 (9) | 0.0416 (8) | 0.0438 (8) | −0.0205 (7) | −0.0171 (7) | 0.0002 (6) |
| C2 | 0.0484 (8) | 0.0412 (7) | 0.0386 (7) | −0.0162 (6) | −0.0132 (6) | −0.0042 (6) |
| C3 | 0.0511 (8) | 0.0457 (8) | 0.0376 (7) | −0.0151 (6) | −0.0140 (6) | −0.0046 (6) |
| C4 | 0.0863 (13) | 0.0511 (9) | 0.0559 (10) | −0.0162 (9) | −0.0307 (9) | −0.0118 (8) |
| C5 | 0.1002 (16) | 0.0693 (12) | 0.0592 (11) | −0.0239 (11) | −0.0358 (11) | −0.0190 (9) |
| C6 | 0.0763 (12) | 0.0757 (12) | 0.0461 (9) | −0.0234 (10) | −0.0281 (9) | −0.0061 (8) |
| C7 | 0.0612 (10) | 0.0577 (10) | 0.0451 (8) | −0.0196 (8) | −0.0212 (7) | 0.0023 (7) |
| C8 | 0.0474 (8) | 0.0483 (8) | 0.0396 (7) | −0.0197 (7) | −0.0124 (6) | −0.0017 (6) |
| C9 | 0.0478 (8) | 0.0392 (7) | 0.0431 (8) | −0.0128 (6) | −0.0159 (6) | −0.0062 (6) |
| C10 | 0.0492 (8) | 0.0453 (8) | 0.0374 (7) | −0.0155 (6) | −0.0140 (6) | −0.0080 (6) |
| C11 | 0.0450 (8) | 0.0382 (7) | 0.0350 (7) | −0.0121 (6) | −0.0124 (6) | −0.0063 (5) |
| C12 | 0.0451 (8) | 0.0370 (7) | 0.0387 (7) | −0.0116 (6) | −0.0115 (6) | −0.0069 (6) |
| C13 | 0.0564 (9) | 0.0452 (8) | 0.0407 (8) | −0.0138 (7) | −0.0158 (7) | −0.0065 (6) |
| C14 | 0.0693 (11) | 0.0483 (9) | 0.0450 (8) | −0.0145 (8) | −0.0188 (8) | 0.0026 (7) |
| C15 | 0.0777 (12) | 0.0387 (8) | 0.0625 (10) | −0.0189 (8) | −0.0206 (9) | 0.0008 (7) |
| C16 | 0.0696 (11) | 0.0410 (8) | 0.0587 (10) | −0.0185 (7) | −0.0184 (8) | −0.0118 (7) |
| C17 | 0.0483 (8) | 0.0388 (7) | 0.0423 (8) | −0.0110 (6) | −0.0130 (6) | −0.0092 (6) |
| O3 | 0.066 (6) | 0.049 (3) | 0.053 (3) | −0.023 (4) | −0.019 (2) | −0.003 (2) |
| C18 | 0.085 (4) | 0.078 (7) | 0.080 (4) | −0.035 (4) | −0.037 (3) | −0.019 (4) |
| C19 | 0.059 (3) | 0.053 (2) | 0.115 (5) | −0.020 (2) | −0.028 (3) | −0.005 (3) |
| C20 | 0.070 (3) | 0.053 (2) | 0.073 (3) | −0.0203 (19) | −0.032 (2) | 0.0115 (18) |
| C21 | 0.098 (6) | 0.048 (3) | 0.041 (3) | −0.029 (4) | −0.004 (3) | −0.012 (2) |
| O3' | 0.055 (5) | 0.054 (4) | 0.047 (4) | −0.015 (2) | −0.021 (3) | −0.014 (3) |
| C18' | 0.057 (4) | 0.047 (4) | 0.080 (5) | −0.012 (3) | −0.029 (4) | −0.016 (4) |
| C19' | 0.072 (4) | 0.057 (3) | 0.112 (5) | −0.028 (3) | −0.014 (4) | −0.022 (3) |
| C20' | 0.152 (11) | 0.123 (8) | 0.079 (5) | −0.090 (8) | −0.025 (6) | 0.009 (5) |
| C21' | 0.066 (5) | 0.059 (6) | 0.059 (5) | −0.005 (3) | −0.016 (3) | −0.023 (3) |
| S1—C9 | 1.6467 (15) | C13—H13 | 0.9300 |
| O1—C1 | 1.2307 (18) | C14—C15 | 1.387 (3) |
| O2—C10 | 1.2215 (18) | C14—H14 | 0.9300 |
| N1—C1 | 1.350 (2) | C15—C16 | 1.381 (3) |
| N1—C8 | 1.403 (2) | C15—H15 | 0.9300 |
| N1—H1 | 0.877 (14) | C16—C17 | 1.376 (2) |
| N2—C2 | 1.2868 (19) | C16—H16 | 0.9300 |
| N2—N3 | 1.3498 (17) | O3—C21 | 1.424 (9) |
| N3—C9 | 1.3670 (19) | O3—C18 | 1.438 (9) |
| N3—H3 | 0.847 (14) | C18—C19 | 1.496 (9) |
| N4—C9 | 1.3557 (19) | C18—H18C | 0.9700 |
| N4—N5 | 1.3601 (17) | C18—H18D | 0.9700 |
| N4—H4 | 0.860 (14) | C19—C20 | 1.527 (6) |
| N5—C11 | 1.2861 (18) | C19—H19C | 0.9700 |
| N6—C10 | 1.357 (2) | C19—H19D | 0.9700 |
| N6—C17 | 1.4088 (19) | C20—C21 | 1.516 (9) |
| N6—H6 | 0.837 (14) | C20—H20C | 0.9700 |
| C1—C2 | 1.508 (2) | C20—H20D | 0.9700 |
| C2—C3 | 1.450 (2) | C21—H21C | 0.9700 |
| C3—C4 | 1.380 (2) | C21—H21D | 0.9700 |
| C3—C8 | 1.394 (2) | O3'—C21' | 1.430 (11) |
| C4—C5 | 1.383 (3) | O3'—C18' | 1.438 (11) |
| C4—H4A | 0.9300 | C18'—C19' | 1.504 (9) |
| C5—C6 | 1.384 (3) | C18'—H18A | 0.9700 |
| C5—H5 | 0.9300 | C18'—H18B | 0.9700 |
| C6—C7 | 1.386 (3) | C19'—C20' | 1.536 (10) |
| C6—H6A | 0.9300 | C19'—H19A | 0.9700 |
| C7—C8 | 1.375 (2) | C19'—H19B | 0.9700 |
| C7—H7 | 0.9300 | C20'—C21' | 1.515 (11) |
| C10—C11 | 1.5123 (19) | C20'—H20A | 0.9700 |
| C11—C12 | 1.4525 (19) | C20'—H20B | 0.9700 |
| C12—C13 | 1.387 (2) | C21'—H21A | 0.9700 |
| C12—C17 | 1.394 (2) | C21'—H21B | 0.9700 |
| C13—C14 | 1.379 (2) | ||
| C1—N1—C8 | 111.71 (13) | C14—C15—H15 | 119.3 |
| C1—N1—H1 | 124.8 (13) | C17—C16—C15 | 117.62 (15) |
| C8—N1—H1 | 122.7 (13) | C17—C16—H16 | 121.2 |
| C2—N2—N3 | 118.31 (12) | C15—C16—H16 | 121.2 |
| N2—N3—C9 | 119.91 (12) | C16—C17—C12 | 121.62 (14) |
| N2—N3—H3 | 119.6 (12) | C16—C17—N6 | 128.80 (14) |
| C9—N3—H3 | 120.3 (12) | C12—C17—N6 | 109.57 (12) |
| C9—N4—N5 | 119.78 (12) | C21—O3—C18 | 108.8 (8) |
| C9—N4—H4 | 121.0 (12) | O3—C18—C19 | 104.9 (7) |
| N5—N4—H4 | 119.1 (12) | O3—C18—H18C | 110.8 |
| C11—N5—N4 | 116.37 (12) | C19—C18—H18C | 110.8 |
| C10—N6—C17 | 111.43 (12) | O3—C18—H18D | 110.8 |
| C10—N6—H6 | 124.2 (13) | C19—C18—H18D | 110.8 |
| C17—N6—H6 | 123.8 (13) | H18C—C18—H18D | 108.8 |
| O1—C1—N1 | 127.78 (14) | C18—C19—C20 | 102.6 (5) |
| O1—C1—C2 | 126.52 (14) | C18—C19—H19C | 111.3 |
| N1—C1—C2 | 105.69 (12) | C20—C19—H19C | 111.3 |
| N2—C2—C3 | 124.33 (14) | C18—C19—H19D | 111.3 |
| N2—C2—C1 | 129.33 (13) | C20—C19—H19D | 111.3 |
| C3—C2—C1 | 106.29 (12) | H19C—C19—H19D | 109.2 |
| C4—C3—C8 | 120.65 (15) | C21—C20—C19 | 97.6 (5) |
| C4—C3—C2 | 132.58 (15) | C21—C20—H20C | 112.2 |
| C8—C3—C2 | 106.77 (13) | C19—C20—H20C | 112.2 |
| C3—C4—C5 | 118.04 (17) | C21—C20—H20D | 112.2 |
| C3—C4—H4A | 121.0 | C19—C20—H20D | 112.2 |
| C5—C4—H4A | 121.0 | H20C—C20—H20D | 109.8 |
| C4—C5—C6 | 120.79 (18) | O3—C21—C20 | 105.2 (8) |
| C4—C5—H5 | 119.6 | O3—C21—H21C | 110.7 |
| C6—C5—H5 | 119.6 | C20—C21—H21C | 110.7 |
| C5—C6—C7 | 121.64 (16) | O3—C21—H21D | 110.7 |
| C5—C6—H6A | 119.2 | C20—C21—H21D | 110.7 |
| C7—C6—H6A | 119.2 | H21C—C21—H21D | 108.8 |
| C8—C7—C6 | 117.22 (16) | C21'—O3'—C18' | 108.2 (10) |
| C8—C7—H7 | 121.4 | O3'—C18'—C19' | 103.9 (9) |
| C6—C7—H7 | 121.4 | O3'—C18'—H18A | 111.0 |
| C7—C8—C3 | 121.65 (15) | C19'—C18'—H18A | 111.0 |
| C7—C8—N1 | 128.92 (15) | O3'—C18'—H18B | 111.0 |
| C3—C8—N1 | 109.42 (13) | C19'—C18'—H18B | 111.0 |
| N4—C9—N3 | 112.67 (13) | H18A—C18'—H18B | 109.0 |
| N4—C9—S1 | 126.85 (11) | C18'—C19'—C20' | 100.5 (7) |
| N3—C9—S1 | 120.48 (11) | C18'—C19'—H19A | 111.7 |
| O2—C10—N6 | 127.57 (14) | C20'—C19'—H19A | 111.7 |
| O2—C10—C11 | 126.71 (13) | C18'—C19'—H19B | 111.7 |
| N6—C10—C11 | 105.72 (12) | C20'—C19'—H19B | 111.7 |
| N5—C11—C12 | 124.64 (13) | H19A—C19'—H19B | 109.4 |
| N5—C11—C10 | 129.04 (13) | C21'—C20'—C19' | 101.2 (8) |
| C12—C11—C10 | 106.31 (12) | C21'—C20'—H20A | 111.5 |
| C13—C12—C17 | 120.17 (13) | C19'—C20'—H20A | 111.5 |
| C13—C12—C11 | 132.86 (13) | C21'—C20'—H20B | 111.5 |
| C17—C12—C11 | 106.91 (12) | C19'—C20'—H20B | 111.5 |
| C14—C13—C12 | 118.37 (15) | H20A—C20'—H20B | 109.3 |
| C14—C13—H13 | 120.8 | O3'—C21'—C20' | 107.5 (9) |
| C12—C13—H13 | 120.8 | O3'—C21'—H21A | 110.2 |
| C13—C14—C15 | 120.77 (15) | C20'—C21'—H21A | 110.2 |
| C13—C14—H14 | 119.6 | O3'—C21'—H21B | 110.2 |
| C15—C14—H14 | 119.6 | C20'—C21'—H21B | 110.2 |
| C16—C15—C14 | 121.45 (15) | H21A—C21'—H21B | 108.5 |
| C16—C15—H15 | 119.3 |
| H··· | ||||
| N1—H1···O3i | 0.88 (1) | 1.96 (2) | 2.829 (15) | 168 (2) |
| N1—H1···O3′i | 0.88 (1) | 1.98 (3) | 2.84 (2) | 167 (2) |
| N3—H3···O1 | 0.85 (1) | 2.18 (2) | 2.8369 (16) | 134 (2) |
| N4—H4···O2 | 0.86 (1) | 2.10 (2) | 2.7857 (16) | 136 (2) |
| N6—H6···O1ii | 0.84 (1) | 2.32 (2) | 3.0522 (16) | 146 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O3i | 0.88 (1) | 1.96 (2) | 2.829 (15) | 168 (2) |
| N1—H1⋯O3′i | 0.88 (1) | 1.98 (3) | 2.84 (2) | 167 (2) |
| N3—H3⋯O1 | 0.85 (1) | 2.18 (2) | 2.8369 (16) | 134 (2) |
| N4—H4⋯O2 | 0.86 (1) | 2.10 (2) | 2.7857 (16) | 136 (2) |
| N6—H6⋯O1ii | 0.84 (1) | 2.32 (2) | 3.0522 (16) | 146 (2) |
Symmetry codes: (i) ; (ii) .