| Literature DB >> 22719585 |
Akbar Raissi Shabari, Mehrdad Pourayoubi, Hassan Fadaei, Marek Nečas, Michal Babiak.
Abstract
The P atom in the title compound, C(16)H(17)Cl(3)N(3)O(2)P, is bonded in a distorted tetra-hedral geometry with the phosphoryl and carbonyl groups anti with respect to one another. In the crystal, mol-ecules are linked through (N-H)(2)⋯O(=P) and N-H⋯O(=C) hydrogen bonds into chains along [001]. The phosphoryl O atom acts as a double hydrogen-bond acceptor.Entities:
Year: 2012 PMID: 22719585 PMCID: PMC3379387 DOI: 10.1107/S160053681202154X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H17Cl3N3O2P | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5060 reflections |
| θ = 3.3–27.7° | |
| µ = 0.59 mm−1 | |
| β = 97.565 (3)° | Prism, colourless |
| 0.60 × 0.60 × 0.60 mm | |
| Oxford Diffraction Xcalibur Sapphire2 diffractometer | 3265 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 2820 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.4353 pixels mm-1 | θmax = 25.0°, θmin = 3.5° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 6796 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3265 reflections | (Δ/σ)max = 0.001 |
| 240 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.42010 (3) | 0.60382 (4) | 0.43562 (4) | 0.02457 (13) | |
| O1 | 0.14643 (7) | 0.76151 (12) | 0.35677 (12) | 0.0207 (3) | |
| P1 | 0.17851 (3) | 0.74597 (4) | 0.50145 (4) | 0.01634 (12) | |
| C1 | 0.12216 (10) | 0.51775 (18) | 0.53131 (17) | 0.0191 (4) | |
| N1 | 0.13973 (9) | 0.63843 (15) | 0.58334 (15) | 0.0190 (3) | |
| Cl2 | 0.46136 (3) | 0.60149 (5) | 0.72774 (4) | 0.02712 (13) | |
| O2 | 0.30612 (7) | 0.68782 (12) | 0.72621 (12) | 0.0225 (3) | |
| C2 | 0.07280 (11) | 0.5003 (2) | 0.41018 (18) | 0.0246 (4) | |
| H2 | 0.0532 | 0.5692 | 0.3573 | 0.030* | |
| N2 | 0.17663 (9) | 0.86377 (15) | 0.60406 (16) | 0.0187 (3) | |
| Cl3 | 0.44563 (3) | 0.83378 (5) | 0.58356 (5) | 0.02685 (13) | |
| C3 | 0.05233 (11) | 0.3820 (2) | 0.3671 (2) | 0.0287 (5) | |
| H3 | 0.0200 | 0.3709 | 0.2829 | 0.034* | |
| N3 | 0.27364 (9) | 0.71385 (15) | 0.49795 (15) | 0.0182 (3) | |
| C4 | 0.07772 (11) | 0.2797 (2) | 0.4435 (2) | 0.0292 (5) | |
| C5 | 0.12832 (12) | 0.2987 (2) | 0.5623 (2) | 0.0335 (5) | |
| H5 | 0.1480 | 0.2298 | 0.6151 | 0.040* | |
| C6 | 0.15074 (11) | 0.41629 (19) | 0.6055 (2) | 0.0276 (5) | |
| H6 | 0.1859 | 0.4270 | 0.6865 | 0.033* | |
| C7 | 0.22672 (10) | 0.96637 (17) | 0.60665 (17) | 0.0180 (4) | |
| C8 | 0.25836 (11) | 1.00236 (18) | 0.49043 (18) | 0.0228 (4) | |
| H8 | 0.2465 | 0.9582 | 0.4072 | 0.027* | |
| C9 | 0.30726 (12) | 1.10297 (18) | 0.4972 (2) | 0.0258 (4) | |
| H9 | 0.3296 | 1.1253 | 0.4180 | 0.031* | |
| C10 | 0.32484 (11) | 1.17239 (18) | 0.61502 (19) | 0.0250 (4) | |
| C11 | 0.29305 (12) | 1.13365 (19) | 0.7299 (2) | 0.0280 (5) | |
| H11 | 0.3047 | 1.1781 | 0.8130 | 0.034* | |
| C12 | 0.24498 (11) | 1.03244 (18) | 0.72679 (18) | 0.0237 (4) | |
| H12 | 0.2244 | 1.0081 | 0.8072 | 0.028* | |
| C13 | 0.05026 (13) | 0.1515 (2) | 0.4026 (3) | 0.0414 (6) | |
| H13A | 0.0835 | 0.0908 | 0.4550 | 0.062* | |
| H13B | 0.0523 | 0.1396 | 0.3047 | 0.062* | |
| H13C | −0.0029 | 0.1410 | 0.4217 | 0.062* | |
| C14 | 0.37295 (13) | 1.2873 (2) | 0.6172 (2) | 0.0350 (5) | |
| H14A | 0.4040 | 1.2957 | 0.7069 | 0.052* | |
| H14B | 0.3392 | 1.3590 | 0.5998 | 0.052* | |
| H14C | 0.4071 | 1.2819 | 0.5462 | 0.052* | |
| C15 | 0.32379 (10) | 0.69330 (17) | 0.61173 (17) | 0.0175 (4) | |
| C16 | 0.40963 (10) | 0.68105 (17) | 0.58949 (17) | 0.0192 (4) | |
| H1N | 0.1460 (12) | 0.6449 (19) | 0.662 (2) | 0.023 (6)* | |
| H2N | 0.1638 (12) | 0.848 (2) | 0.672 (2) | 0.026 (6)* | |
| H3N | 0.2878 (12) | 0.720 (2) | 0.430 (2) | 0.027 (6)* |
| Cl1 | 0.0236 (2) | 0.0341 (3) | 0.0165 (2) | 0.0062 (2) | 0.00442 (17) | −0.00528 (19) |
| O1 | 0.0204 (6) | 0.0296 (7) | 0.0124 (6) | −0.0004 (6) | 0.0027 (5) | 0.0013 (5) |
| P1 | 0.0169 (2) | 0.0216 (3) | 0.0107 (2) | −0.0005 (2) | 0.00235 (17) | 0.00029 (18) |
| C1 | 0.0155 (9) | 0.0273 (10) | 0.0154 (8) | −0.0044 (8) | 0.0054 (7) | −0.0026 (8) |
| N1 | 0.0243 (8) | 0.0253 (9) | 0.0076 (7) | −0.0037 (7) | 0.0025 (6) | −0.0019 (7) |
| Cl2 | 0.0263 (3) | 0.0359 (3) | 0.0180 (2) | 0.0092 (2) | −0.00139 (18) | 0.00249 (19) |
| O2 | 0.0227 (7) | 0.0329 (8) | 0.0125 (6) | 0.0018 (6) | 0.0047 (5) | 0.0003 (5) |
| C2 | 0.0218 (10) | 0.0349 (12) | 0.0168 (9) | −0.0005 (9) | 0.0010 (7) | −0.0019 (8) |
| N2 | 0.0224 (8) | 0.0230 (9) | 0.0118 (7) | −0.0006 (7) | 0.0064 (6) | 0.0011 (7) |
| Cl3 | 0.0271 (3) | 0.0285 (3) | 0.0252 (2) | −0.0063 (2) | 0.00431 (19) | −0.00010 (19) |
| C3 | 0.0214 (10) | 0.0447 (13) | 0.0199 (10) | −0.0068 (10) | 0.0015 (8) | −0.0129 (9) |
| N3 | 0.0196 (8) | 0.0263 (9) | 0.0099 (8) | 0.0011 (7) | 0.0059 (6) | 0.0006 (6) |
| C4 | 0.0211 (10) | 0.0318 (12) | 0.0350 (11) | −0.0031 (9) | 0.0050 (8) | −0.0110 (9) |
| C5 | 0.0296 (11) | 0.0267 (11) | 0.0411 (12) | −0.0014 (10) | −0.0065 (9) | −0.0007 (10) |
| C6 | 0.0271 (11) | 0.0277 (11) | 0.0254 (10) | −0.0017 (9) | −0.0062 (8) | −0.0013 (8) |
| C7 | 0.0173 (9) | 0.0186 (9) | 0.0177 (9) | 0.0027 (8) | 0.0011 (7) | 0.0023 (7) |
| C8 | 0.0298 (10) | 0.0225 (10) | 0.0164 (9) | 0.0016 (9) | 0.0039 (7) | 0.0014 (8) |
| C9 | 0.0287 (10) | 0.0237 (11) | 0.0262 (10) | 0.0006 (9) | 0.0080 (8) | 0.0065 (8) |
| C10 | 0.0216 (10) | 0.0229 (10) | 0.0292 (10) | 0.0010 (8) | −0.0018 (8) | 0.0059 (8) |
| C11 | 0.0352 (11) | 0.0249 (11) | 0.0220 (10) | −0.0029 (9) | −0.0033 (8) | −0.0010 (8) |
| C12 | 0.0289 (10) | 0.0259 (10) | 0.0160 (9) | −0.0006 (9) | 0.0025 (7) | 0.0020 (8) |
| C13 | 0.0329 (12) | 0.0363 (13) | 0.0537 (15) | −0.0078 (11) | 0.0003 (11) | −0.0157 (11) |
| C14 | 0.0323 (12) | 0.0326 (12) | 0.0386 (12) | −0.0074 (10) | −0.0010 (9) | 0.0042 (10) |
| C15 | 0.0205 (9) | 0.0174 (9) | 0.0146 (9) | 0.0002 (8) | 0.0026 (7) | −0.0012 (7) |
| C16 | 0.0206 (9) | 0.0226 (10) | 0.0144 (9) | 0.0007 (8) | 0.0024 (7) | −0.0014 (7) |
| Cl1—C16 | 1.7644 (18) | C5—C6 | 1.387 (3) |
| O1—P1 | 1.4727 (12) | C5—H5 | 0.9500 |
| P1—N1 | 1.6195 (16) | C6—H6 | 0.9500 |
| P1—N2 | 1.6345 (16) | C7—C12 | 1.386 (3) |
| P1—N3 | 1.7071 (16) | C7—C8 | 1.393 (2) |
| C1—C6 | 1.380 (3) | C8—C9 | 1.385 (3) |
| C1—C2 | 1.392 (2) | C8—H8 | 0.9500 |
| C1—N1 | 1.427 (2) | C9—C10 | 1.385 (3) |
| N1—H1N | 0.77 (2) | C9—H9 | 0.9500 |
| Cl2—C16 | 1.7611 (18) | C10—C11 | 1.392 (3) |
| O2—C15 | 1.211 (2) | C10—C14 | 1.505 (3) |
| C2—C3 | 1.386 (3) | C11—C12 | 1.383 (3) |
| C2—H2 | 0.9500 | C11—H11 | 0.9500 |
| N2—C7 | 1.417 (2) | C12—H12 | 0.9500 |
| N2—H2N | 0.76 (2) | C13—H13A | 0.9800 |
| Cl3—C16 | 1.7786 (19) | C13—H13B | 0.9800 |
| C3—C4 | 1.383 (3) | C13—H13C | 0.9800 |
| C3—H3 | 0.9500 | C14—H14A | 0.9800 |
| N3—C15 | 1.349 (2) | C14—H14B | 0.9800 |
| N3—H3N | 0.75 (2) | C14—H14C | 0.9800 |
| C4—C5 | 1.388 (3) | C15—C16 | 1.553 (2) |
| C4—C13 | 1.510 (3) | ||
| O1—P1—N1 | 115.74 (8) | C9—C8—C7 | 119.49 (18) |
| O1—P1—N2 | 118.28 (8) | C9—C8—H8 | 120.3 |
| N1—P1—N2 | 102.25 (8) | C7—C8—H8 | 120.3 |
| O1—P1—N3 | 104.64 (7) | C8—C9—C10 | 122.55 (18) |
| N1—P1—N3 | 109.71 (8) | C8—C9—H9 | 118.7 |
| N2—P1—N3 | 105.77 (8) | C10—C9—H9 | 118.7 |
| C6—C1—C2 | 119.16 (18) | C9—C10—C11 | 116.71 (18) |
| C6—C1—N1 | 119.83 (16) | C9—C10—C14 | 121.72 (18) |
| C2—C1—N1 | 120.91 (17) | C11—C10—C14 | 121.51 (18) |
| C1—N1—P1 | 124.64 (12) | C12—C11—C10 | 122.02 (18) |
| C1—N1—H1N | 116.1 (16) | C12—C11—H11 | 119.0 |
| P1—N1—H1N | 114.9 (16) | C10—C11—H11 | 119.0 |
| C3—C2—C1 | 119.68 (19) | C11—C12—C7 | 120.13 (17) |
| C3—C2—H2 | 120.2 | C11—C12—H12 | 119.9 |
| C1—C2—H2 | 120.2 | C7—C12—H12 | 119.9 |
| C7—N2—P1 | 124.35 (12) | C4—C13—H13A | 109.5 |
| C7—N2—H2N | 114.8 (17) | C4—C13—H13B | 109.5 |
| P1—N2—H2N | 113.8 (17) | H13A—C13—H13B | 109.5 |
| C4—C3—C2 | 121.81 (18) | C4—C13—H13C | 109.5 |
| C4—C3—H3 | 119.1 | H13A—C13—H13C | 109.5 |
| C2—C3—H3 | 119.1 | H13B—C13—H13C | 109.5 |
| C15—N3—P1 | 123.18 (13) | C10—C14—H14A | 109.5 |
| C15—N3—H3N | 120.2 (17) | C10—C14—H14B | 109.5 |
| P1—N3—H3N | 116.2 (17) | H14A—C14—H14B | 109.5 |
| C3—C4—C5 | 117.62 (19) | C10—C14—H14C | 109.5 |
| C3—C4—C13 | 121.82 (19) | H14A—C14—H14C | 109.5 |
| C5—C4—C13 | 120.5 (2) | H14B—C14—H14C | 109.5 |
| C6—C5—C4 | 121.3 (2) | O2—C15—N3 | 124.41 (16) |
| C6—C5—H5 | 119.3 | O2—C15—C16 | 119.89 (15) |
| C4—C5—H5 | 119.3 | N3—C15—C16 | 115.66 (14) |
| C1—C6—C5 | 120.31 (18) | C15—C16—Cl2 | 109.98 (12) |
| C1—C6—H6 | 119.8 | C15—C16—Cl1 | 111.97 (12) |
| C5—C6—H6 | 119.8 | Cl2—C16—Cl1 | 109.34 (10) |
| C12—C7—C8 | 119.06 (17) | C15—C16—Cl3 | 106.17 (12) |
| C12—C7—N2 | 119.70 (16) | Cl2—C16—Cl3 | 109.57 (10) |
| C8—C7—N2 | 121.24 (16) | Cl1—C16—Cl3 | 109.75 (9) |
| C6—C1—N1—P1 | 125.17 (17) | P1—N2—C7—C12 | −152.11 (15) |
| C2—C1—N1—P1 | −58.6 (2) | P1—N2—C7—C8 | 27.7 (2) |
| O1—P1—N1—C1 | 44.72 (17) | C12—C7—C8—C9 | 0.0 (3) |
| N2—P1—N1—C1 | 174.73 (14) | N2—C7—C8—C9 | −179.82 (17) |
| N3—P1—N1—C1 | −73.35 (16) | C7—C8—C9—C10 | −1.7 (3) |
| C6—C1—C2—C3 | 0.9 (3) | C8—C9—C10—C11 | 2.3 (3) |
| N1—C1—C2—C3 | −175.35 (16) | C8—C9—C10—C14 | −174.99 (19) |
| O1—P1—N2—C7 | −75.36 (16) | C9—C10—C11—C12 | −1.3 (3) |
| N1—P1—N2—C7 | 156.22 (14) | C14—C10—C11—C12 | 176.03 (19) |
| N3—P1—N2—C7 | 41.39 (16) | C10—C11—C12—C7 | −0.3 (3) |
| C1—C2—C3—C4 | 2.0 (3) | C8—C7—C12—C11 | 1.0 (3) |
| O1—P1—N3—C15 | 179.94 (15) | N2—C7—C12—C11 | −179.19 (17) |
| N1—P1—N3—C15 | −55.29 (17) | P1—N3—C15—O2 | 4.8 (3) |
| N2—P1—N3—C15 | 54.30 (17) | P1—N3—C15—C16 | −172.98 (13) |
| C2—C3—C4—C5 | −3.5 (3) | O2—C15—C16—Cl2 | 23.4 (2) |
| C2—C3—C4—C13 | 174.88 (19) | N3—C15—C16—Cl2 | −158.68 (14) |
| C3—C4—C5—C6 | 2.1 (3) | O2—C15—C16—Cl1 | 145.21 (15) |
| C13—C4—C5—C6 | −176.3 (2) | N3—C15—C16—Cl1 | −36.9 (2) |
| C2—C1—C6—C5 | −2.3 (3) | O2—C15—C16—Cl3 | −95.03 (18) |
| N1—C1—C6—C5 | 174.01 (18) | N3—C15—C16—Cl3 | 82.86 (17) |
| C4—C5—C6—C1 | 0.8 (3) |
| H··· | ||||
| N1—H1 | 0.77 (2) | 2.17 (2) | 2.8953 (19) | 156 (2) |
| N2—H2 | 0.76 (2) | 2.23 (2) | 2.948 (2) | 159 (2) |
| N3—H3 | 0.75 (2) | 2.31 (2) | 3.008 (2) | 157 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.77 (2) | 2.17 (2) | 2.8953 (19) | 156 (2) |
| N2—H2 | 0.76 (2) | 2.23 (2) | 2.948 (2) | 159 (2) |
| N3—H3 | 0.75 (2) | 2.31 (2) | 3.008 (2) | 157 (2) |
Symmetry codes: (i) ; (ii) .