| Literature DB >> 22719545 |
Wenwen Sun1, Lei Cao, Cen Zhang, Lifei Zhu, Le Zhou.
Abstract
IN THE CRYSTAL STRUCTURE OF THE TITLE COMPOUND [SYSTEMATIC NAME: 6,7-dimeth-oxy-12-methyl-16,18-dioxa-12-aza-tetra-cyclo-[12.7.0.0(4,9).0(15,19)]henicosa-1(21),4,6,8,14,19-hexaen-3-ol], C(21)H(25)NO(5), the benzene rings exhibits a dihedral angle of 14.95 (4)°. In the crystal, mol-ecules are linked by pairs of O-H⋯O hydrogen bonding into inversion dimers. These dimers are further connected by C-H⋯O inter-actions.Entities:
Year: 2012 PMID: 22719545 PMCID: PMC3379347 DOI: 10.1107/S1600536812017588
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H25NO5 | |
| Monoclinic, | Mo |
| Cell parameters from 4124 reflections | |
| θ = 2.5–26.5° | |
| µ = 0.09 mm−1 | |
| β = 92.164 (2)° | |
| Block, colourless | |
| 0.26 × 0.21 × 0.18 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 3460 independent reflections |
| Radiation source: fine-focus sealed tube | 2721 reflections with |
| Graphite monochromator | |
| phi and ω scans | θmax = 25.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 13267 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3460 reflections | (Δ/σ)max < 0.001 |
| 248 parameters | Δρmax = 0.12 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.7221 (2) | 0.5338 (3) | 0.34220 (6) | 0.0678 (5) | |
| H1A | 0.6576 | 0.6282 | 0.3550 | 0.081* | |
| H1B | 0.8016 | 0.5203 | 0.3638 | 0.081* | |
| C2 | 0.72327 (15) | 0.4630 (2) | 0.26692 (5) | 0.0479 (4) | |
| C3 | 0.65789 (15) | 0.3100 (3) | 0.28885 (5) | 0.0487 (4) | |
| C4 | 0.60582 (15) | 0.1506 (2) | 0.26509 (5) | 0.0487 (4) | |
| H4 | 0.5641 | 0.0445 | 0.2798 | 0.058* | |
| C5 | 0.61899 (14) | 0.1562 (2) | 0.21705 (5) | 0.0422 (3) | |
| H5 | 0.5837 | 0.0503 | 0.1996 | 0.051* | |
| C6 | 0.68174 (13) | 0.3111 (2) | 0.19394 (5) | 0.0377 (3) | |
| C7 | 0.73928 (15) | 0.4729 (2) | 0.21985 (5) | 0.0431 (3) | |
| C8 | 0.80651 (18) | 0.6541 (2) | 0.19944 (5) | 0.0548 (4) | |
| H8A | 0.7337 | 0.7419 | 0.1873 | 0.066* | |
| H8B | 0.8579 | 0.7244 | 0.2239 | 0.066* | |
| C9 | 0.92335 (19) | 0.7795 (2) | 0.13244 (6) | 0.0612 (5) | |
| H9A | 1.0044 | 0.7549 | 0.1141 | 0.073* | |
| H9B | 0.9429 | 0.8954 | 0.1515 | 0.073* | |
| C10 | 0.79804 (19) | 0.8230 (2) | 0.09997 (6) | 0.0576 (4) | |
| H10A | 0.7165 | 0.8392 | 0.1185 | 0.069* | |
| H10B | 0.8141 | 0.9485 | 0.0846 | 0.069* | |
| C11 | 0.76530 (15) | 0.6684 (2) | 0.06336 (5) | 0.0446 (4) | |
| C12 | 0.67469 (14) | 0.5083 (2) | 0.06902 (5) | 0.0410 (3) | |
| C13 | 0.60773 (14) | 0.4639 (2) | 0.11475 (5) | 0.0411 (3) | |
| H13 | 0.6067 | 0.5852 | 0.1334 | 0.049* | |
| C14 | 0.68894 (14) | 0.3028 (2) | 0.14177 (4) | 0.0390 (3) | |
| H14A | 0.6543 | 0.1744 | 0.1314 | 0.047* | |
| H14B | 0.7863 | 0.3110 | 0.1338 | 0.047* | |
| C15 | 1.03219 (19) | 0.5291 (4) | 0.18198 (7) | 0.0806 (6) | |
| H15A | 1.0963 | 0.5089 | 0.1577 | 0.121* | |
| H15B | 1.0145 | 0.4048 | 0.1969 | 0.121* | |
| H15C | 1.0718 | 0.6208 | 0.2042 | 0.121* | |
| C16 | 0.64789 (15) | 0.3799 (2) | 0.03173 (5) | 0.0435 (3) | |
| H16 | 0.5874 | 0.2737 | 0.0354 | 0.052* | |
| C17 | 0.70861 (15) | 0.4061 (2) | −0.01042 (5) | 0.0450 (4) | |
| C18 | 0.80076 (15) | 0.5652 (2) | −0.01613 (5) | 0.0462 (4) | |
| C19 | 0.82693 (16) | 0.6915 (2) | 0.02052 (5) | 0.0490 (4) | |
| H19 | 0.8882 | 0.7967 | 0.0167 | 0.059* | |
| C20 | 0.5989 (2) | 0.1198 (3) | −0.04403 (6) | 0.0634 (5) | |
| H20A | 0.6408 | 0.0319 | −0.0214 | 0.095* | |
| H20B | 0.5888 | 0.0524 | −0.0732 | 0.095* | |
| H20C | 0.5087 | 0.1606 | −0.0342 | 0.095* | |
| C21 | 0.95733 (18) | 0.7328 (3) | −0.06464 (6) | 0.0669 (5) | |
| H21A | 0.9147 | 0.8601 | −0.0605 | 0.100* | |
| H21B | 0.9929 | 0.7246 | −0.0952 | 0.100* | |
| H21C | 1.0326 | 0.7159 | −0.0421 | 0.100* | |
| N1 | 0.90152 (13) | 0.60922 (19) | 0.16244 (4) | 0.0504 (3) | |
| O1 | 0.76747 (15) | 0.6038 (2) | 0.29889 (4) | 0.0766 (4) | |
| O2 | 0.65523 (14) | 0.3471 (2) | 0.33582 (4) | 0.0720 (4) | |
| O3 | 0.46774 (10) | 0.39104 (16) | 0.10842 (4) | 0.0531 (3) | |
| H3 | 0.4165 | 0.4813 | 0.0992 | 0.080* | |
| O4 | 0.68526 (12) | 0.28907 (18) | −0.04891 (3) | 0.0598 (3) | |
| O5 | 0.85638 (11) | 0.58148 (19) | −0.05891 (4) | 0.0626 (3) |
| C1 | 0.0611 (11) | 0.0995 (15) | 0.0425 (9) | 0.0074 (10) | 0.0007 (8) | −0.0176 (9) |
| C2 | 0.0436 (8) | 0.0566 (9) | 0.0436 (8) | 0.0013 (7) | 0.0005 (6) | −0.0111 (7) |
| C3 | 0.0411 (8) | 0.0690 (10) | 0.0361 (8) | 0.0084 (8) | 0.0029 (6) | 0.0023 (7) |
| C4 | 0.0416 (8) | 0.0584 (10) | 0.0463 (9) | 0.0007 (7) | 0.0048 (6) | 0.0102 (7) |
| C5 | 0.0381 (7) | 0.0437 (8) | 0.0448 (8) | 0.0007 (6) | 0.0017 (6) | −0.0003 (6) |
| C6 | 0.0329 (7) | 0.0396 (8) | 0.0409 (7) | 0.0039 (6) | 0.0043 (6) | −0.0019 (6) |
| C7 | 0.0400 (8) | 0.0468 (8) | 0.0430 (8) | 0.0008 (6) | 0.0057 (6) | −0.0055 (6) |
| C8 | 0.0655 (10) | 0.0488 (9) | 0.0507 (9) | −0.0124 (8) | 0.0105 (8) | −0.0138 (7) |
| C9 | 0.0698 (11) | 0.0517 (10) | 0.0631 (11) | −0.0270 (9) | 0.0159 (9) | −0.0119 (8) |
| C10 | 0.0734 (11) | 0.0354 (8) | 0.0653 (10) | −0.0082 (8) | 0.0201 (9) | 0.0018 (7) |
| C11 | 0.0473 (8) | 0.0383 (8) | 0.0488 (8) | 0.0014 (6) | 0.0082 (7) | 0.0079 (6) |
| C12 | 0.0406 (8) | 0.0402 (8) | 0.0425 (8) | 0.0027 (6) | 0.0071 (6) | 0.0061 (6) |
| C13 | 0.0421 (8) | 0.0388 (8) | 0.0431 (8) | −0.0021 (6) | 0.0090 (6) | 0.0005 (6) |
| C14 | 0.0413 (8) | 0.0360 (7) | 0.0403 (8) | −0.0014 (6) | 0.0076 (6) | −0.0042 (6) |
| C15 | 0.0506 (11) | 0.1104 (17) | 0.0806 (14) | −0.0113 (11) | −0.0011 (9) | 0.0008 (12) |
| C16 | 0.0426 (8) | 0.0462 (8) | 0.0420 (8) | −0.0050 (6) | 0.0053 (6) | 0.0063 (6) |
| C17 | 0.0411 (8) | 0.0558 (9) | 0.0381 (8) | 0.0007 (7) | 0.0018 (6) | 0.0054 (7) |
| C18 | 0.0405 (8) | 0.0589 (10) | 0.0396 (8) | −0.0001 (7) | 0.0062 (6) | 0.0131 (7) |
| C19 | 0.0458 (8) | 0.0465 (9) | 0.0553 (9) | −0.0043 (7) | 0.0082 (7) | 0.0147 (7) |
| C20 | 0.0755 (12) | 0.0650 (11) | 0.0500 (10) | −0.0126 (9) | 0.0076 (8) | −0.0057 (8) |
| C21 | 0.0538 (10) | 0.0878 (13) | 0.0600 (10) | −0.0096 (9) | 0.0150 (8) | 0.0255 (10) |
| N1 | 0.0459 (7) | 0.0517 (8) | 0.0541 (8) | −0.0122 (6) | 0.0078 (6) | −0.0070 (6) |
| O1 | 0.0940 (10) | 0.0879 (9) | 0.0483 (7) | −0.0248 (8) | 0.0078 (6) | −0.0235 (6) |
| O2 | 0.0812 (9) | 0.0981 (10) | 0.0369 (6) | −0.0062 (8) | 0.0049 (6) | −0.0039 (6) |
| O3 | 0.0399 (6) | 0.0642 (7) | 0.0555 (7) | −0.0020 (5) | 0.0074 (5) | 0.0149 (5) |
| O4 | 0.0663 (7) | 0.0753 (8) | 0.0382 (6) | −0.0172 (6) | 0.0086 (5) | −0.0013 (5) |
| O5 | 0.0566 (7) | 0.0870 (9) | 0.0451 (6) | −0.0144 (6) | 0.0139 (5) | 0.0140 (6) |
| C1—O1 | 1.420 (2) | C12—C16 | 1.398 (2) |
| C1—O2 | 1.422 (2) | C12—C13 | 1.5200 (19) |
| C1—H1A | 0.9700 | C13—O3 | 1.4335 (17) |
| C1—H1B | 0.9700 | C13—C14 | 1.5322 (19) |
| C2—C3 | 1.374 (2) | C13—H13 | 0.9800 |
| C2—C7 | 1.376 (2) | C14—H14A | 0.9700 |
| C2—O1 | 1.3793 (18) | C14—H14B | 0.9700 |
| C3—C4 | 1.360 (2) | C15—N1 | 1.457 (2) |
| C3—O2 | 1.3807 (17) | C15—H15A | 0.9600 |
| C4—C5 | 1.399 (2) | C15—H15B | 0.9600 |
| C4—H4 | 0.9300 | C15—H15C | 0.9600 |
| C5—C6 | 1.388 (2) | C16—C17 | 1.3805 (19) |
| C5—H5 | 0.9300 | C16—H16 | 0.9300 |
| C6—C7 | 1.422 (2) | C17—O4 | 1.3745 (18) |
| C6—C14 | 1.5122 (18) | C17—C18 | 1.403 (2) |
| C7—C8 | 1.511 (2) | C18—O5 | 1.3685 (17) |
| C8—N1 | 1.4617 (19) | C18—C19 | 1.374 (2) |
| C8—H8A | 0.9700 | C19—H19 | 0.9300 |
| C8—H8B | 0.9700 | C20—O4 | 1.420 (2) |
| C9—N1 | 1.458 (2) | C20—H20A | 0.9600 |
| C9—C10 | 1.524 (3) | C20—H20B | 0.9600 |
| C9—H9A | 0.9700 | C20—H20C | 0.9600 |
| C9—H9B | 0.9700 | C21—O5 | 1.419 (2) |
| C10—C11 | 1.509 (2) | C21—H21A | 0.9600 |
| C10—H10A | 0.9700 | C21—H21B | 0.9600 |
| C10—H10B | 0.9700 | C21—H21C | 0.9600 |
| C11—C19 | 1.400 (2) | O3—H3 | 0.8200 |
| C11—C12 | 1.398 (2) | ||
| O1—C1—O2 | 109.34 (13) | O3—C13—C14 | 106.08 (11) |
| O1—C1—H1A | 109.8 | C12—C13—C14 | 111.07 (11) |
| O2—C1—H1A | 109.8 | O3—C13—H13 | 109.1 |
| O1—C1—H1B | 109.8 | C12—C13—H13 | 109.1 |
| O2—C1—H1B | 109.8 | C14—C13—H13 | 109.1 |
| H1A—C1—H1B | 108.3 | C6—C14—C13 | 116.11 (11) |
| C3—C2—C7 | 124.18 (14) | C6—C14—H14A | 108.3 |
| C3—C2—O1 | 109.97 (13) | C13—C14—H14A | 108.3 |
| C7—C2—O1 | 125.84 (15) | C6—C14—H14B | 108.3 |
| C4—C3—C2 | 121.71 (14) | C13—C14—H14B | 108.3 |
| C4—C3—O2 | 128.23 (15) | H14A—C14—H14B | 107.4 |
| C2—C3—O2 | 110.07 (14) | N1—C15—H15A | 109.5 |
| C3—C4—C5 | 115.72 (14) | N1—C15—H15B | 109.5 |
| C3—C4—H4 | 122.1 | H15A—C15—H15B | 109.5 |
| C5—C4—H4 | 122.1 | N1—C15—H15C | 109.5 |
| C6—C5—C4 | 123.69 (14) | H15A—C15—H15C | 109.5 |
| C6—C5—H5 | 118.2 | H15B—C15—H15C | 109.5 |
| C4—C5—H5 | 118.2 | C17—C16—C12 | 121.96 (14) |
| C5—C6—C7 | 119.32 (13) | C17—C16—H16 | 119.0 |
| C5—C6—C14 | 119.24 (12) | C12—C16—H16 | 119.0 |
| C7—C6—C14 | 121.44 (12) | O4—C17—C16 | 125.38 (14) |
| C2—C7—C6 | 115.33 (13) | O4—C17—C18 | 115.30 (12) |
| C2—C7—C8 | 119.32 (13) | C16—C17—C18 | 119.31 (14) |
| C6—C7—C8 | 125.25 (13) | O5—C18—C19 | 125.45 (14) |
| N1—C8—C7 | 113.84 (12) | O5—C18—C17 | 115.85 (14) |
| N1—C8—H8A | 108.8 | C19—C18—C17 | 118.70 (13) |
| C7—C8—H8A | 108.8 | C18—C19—C11 | 122.79 (14) |
| N1—C8—H8B | 108.8 | C18—C19—H19 | 118.6 |
| C7—C8—H8B | 108.8 | C11—C19—H19 | 118.6 |
| H8A—C8—H8B | 107.7 | O4—C20—H20A | 109.5 |
| N1—C9—C10 | 112.95 (13) | O4—C20—H20B | 109.5 |
| N1—C9—H9A | 109.0 | H20A—C20—H20B | 109.5 |
| C10—C9—H9A | 109.0 | O4—C20—H20C | 109.5 |
| N1—C9—H9B | 109.0 | H20A—C20—H20C | 109.5 |
| C10—C9—H9B | 109.0 | H20B—C20—H20C | 109.5 |
| H9A—C9—H9B | 107.8 | O5—C21—H21A | 109.5 |
| C11—C10—C9 | 115.88 (14) | O5—C21—H21B | 109.5 |
| C11—C10—H10A | 108.3 | H21A—C21—H21B | 109.5 |
| C9—C10—H10A | 108.3 | O5—C21—H21C | 109.5 |
| C11—C10—H10B | 108.3 | H21A—C21—H21C | 109.5 |
| C9—C10—H10B | 108.3 | H21B—C21—H21C | 109.5 |
| H10A—C10—H10B | 107.4 | C9—N1—C15 | 112.43 (14) |
| C19—C11—C12 | 118.27 (14) | C9—N1—C8 | 112.27 (13) |
| C19—C11—C10 | 117.35 (13) | C15—N1—C8 | 110.06 (14) |
| C12—C11—C10 | 124.35 (13) | C2—O1—C1 | 105.37 (14) |
| C16—C12—C11 | 118.97 (13) | C3—O2—C1 | 105.22 (13) |
| C16—C12—C13 | 118.44 (12) | C13—O3—H3 | 109.5 |
| C11—C12—C13 | 122.55 (13) | C17—O4—C20 | 117.30 (12) |
| O3—C13—C12 | 112.35 (11) | C18—O5—C21 | 116.96 (13) |
| C7—C2—C3—C4 | 1.7 (2) | C5—C6—C14—C13 | 115.88 (14) |
| O1—C2—C3—C4 | −179.25 (14) | C7—C6—C14—C13 | −64.86 (17) |
| C7—C2—C3—O2 | −178.17 (14) | O3—C13—C14—C6 | −86.03 (14) |
| O1—C2—C3—O2 | 0.91 (18) | C12—C13—C14—C6 | 151.62 (12) |
| C2—C3—C4—C5 | −2.1 (2) | C11—C12—C16—C17 | 0.2 (2) |
| O2—C3—C4—C5 | 177.69 (14) | C13—C12—C16—C17 | −177.67 (13) |
| C3—C4—C5—C6 | 0.6 (2) | C12—C16—C17—O4 | −178.53 (13) |
| C4—C5—C6—C7 | 1.4 (2) | C12—C16—C17—C18 | 0.4 (2) |
| C4—C5—C6—C14 | −179.36 (13) | O4—C17—C18—O5 | −0.76 (19) |
| C3—C2—C7—C6 | 0.4 (2) | C16—C17—C18—O5 | −179.84 (13) |
| O1—C2—C7—C6 | −178.53 (14) | O4—C17—C18—C19 | 178.58 (13) |
| C3—C2—C7—C8 | 176.81 (15) | C16—C17—C18—C19 | −0.5 (2) |
| O1—C2—C7—C8 | −2.1 (2) | O5—C18—C19—C11 | 179.15 (14) |
| C5—C6—C7—C2 | −1.82 (19) | C17—C18—C19—C11 | −0.1 (2) |
| C14—C6—C7—C2 | 178.92 (13) | C12—C11—C19—C18 | 0.8 (2) |
| C5—C6—C7—C8 | −177.99 (14) | C10—C11—C19—C18 | −177.30 (15) |
| C14—C6—C7—C8 | 2.8 (2) | C10—C9—N1—C15 | 161.30 (15) |
| C2—C7—C8—N1 | 139.97 (14) | C10—C9—N1—C8 | −73.96 (17) |
| C6—C7—C8—N1 | −44.0 (2) | C7—C8—N1—C9 | 158.57 (14) |
| N1—C9—C10—C11 | −66.69 (18) | C7—C8—N1—C15 | −75.39 (18) |
| C9—C10—C11—C19 | −91.15 (17) | C3—C2—O1—C1 | −1.83 (18) |
| C9—C10—C11—C12 | 90.89 (19) | C7—C2—O1—C1 | 177.23 (16) |
| C19—C11—C12—C16 | −0.8 (2) | O2—C1—O1—C2 | 2.09 (18) |
| C10—C11—C12—C16 | 177.11 (14) | C4—C3—O2—C1 | −179.40 (16) |
| C19—C11—C12—C13 | 176.99 (13) | C2—C3—O2—C1 | 0.42 (17) |
| C10—C11—C12—C13 | −5.1 (2) | O1—C1—O2—C3 | −1.56 (18) |
| C16—C12—C13—O3 | −38.64 (17) | C16—C17—O4—C20 | −4.4 (2) |
| C11—C12—C13—O3 | 143.52 (14) | C18—C17—O4—C20 | 176.55 (14) |
| C16—C12—C13—C14 | 79.99 (16) | C19—C18—O5—C21 | 5.0 (2) |
| C11—C12—C13—C14 | −97.85 (15) | C17—C18—O5—C21 | −175.74 (14) |
| H··· | ||||
| O3—H3···O4i | 0.82 | 2.31 | 3.0924 (16) | 159 |
| C1—H1 | 0.97 | 2.41 | 3.367 (2) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O4i | 0.82 | 2.31 | 3.0924 (16) | 159 |
| C1—H1 | 0.97 | 2.41 | 3.367 (2) | 170 |
Symmetry codes: (i) ; (ii) .