| Literature DB >> 22719538 |
Jin Shen, Jing-Jing Qian, Su-Xiang Wu, Jian-Ming Gu, Xiu-Rong Hu.
Abstract
THE TITLE COMPOUND (SYSTEMATIC NAME: 2-{2-[4-(dibenzo[b,f][1,4]thia-zepin-11-yl)piperazin-1-yl 1-oxide]eth-oxy}ethanol-fumaric acid (2/1)), C(21)H(25)N(3)O(3)S·0.5C(4)H(4)O(4), is one of the oxidation products of quetiapine hemifumaric acid. In the tricyclic fragment, the central thia-zepine ring displays a boat conformation and the benzene rings are inclined to each other at a dihedral angle of 72.0 (2)°. The piperazine ring adopts a chair conformation with its eth-oxy-ethanol side chain oriented equatorially. In addition to the main mol-ecule, the asymmetric unit contains one-half mol-ecule of fumaric acid, the complete mol-ecule being generated by inversion symmetry. In the crystal, O-H⋯O hydrogen bonds link the components into corrugated layers parallel to bc plane.Entities:
Year: 2012 PMID: 22719538 PMCID: PMC3379340 DOI: 10.1107/S1600536812020818
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H25N3O3S·0.5C4H4O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 10875 reflections |
| θ = 3.1–27.5° | |
| µ = 0.18 mm−1 | |
| β = 101.59 (2)° | Platelet, colourless |
| 0.27 × 0.25 × 0.10 mm | |
| Rigaku R-AXIS RAPID/ZJUG diffractometer | 3970 independent reflections |
| Radiation source: rolling anode | 2453 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 25.0°, θmin = 3.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 17003 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3970 reflections | Δρmax = 0.37 e Å−3 |
| 291 parameters | Δρmin = −0.39 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0142 (18) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4958 (3) | 0.6665 (3) | 0.5761 (3) | 0.0441 (9) | |
| C2 | 0.6017 (3) | 0.6567 (3) | 0.5537 (3) | 0.0433 (9) | |
| C3 | 0.6156 (3) | 0.6002 (3) | 0.4723 (3) | 0.0490 (10) | |
| H3 | 0.5591 | 0.5665 | 0.4332 | 0.059* | |
| C4 | 0.7121 (4) | 0.5933 (3) | 0.4486 (3) | 0.0586 (11) | |
| H4 | 0.7205 | 0.5554 | 0.3936 | 0.070* | |
| C5 | 0.7957 (4) | 0.6424 (4) | 0.5060 (4) | 0.0688 (13) | |
| H5 | 0.8601 | 0.6407 | 0.4880 | 0.083* | |
| C6 | 0.7850 (4) | 0.6941 (4) | 0.5900 (4) | 0.0648 (12) | |
| H6 | 0.8430 | 0.7235 | 0.6306 | 0.078* | |
| C7 | 0.6881 (3) | 0.7027 (3) | 0.6146 (3) | 0.0486 (10) | |
| C8 | 0.6330 (3) | 0.6545 (3) | 0.7814 (3) | 0.0522 (10) | |
| C9 | 0.6911 (4) | 0.6175 (4) | 0.8694 (3) | 0.0683 (13) | |
| H9 | 0.7536 | 0.6507 | 0.8964 | 0.082* | |
| C10 | 0.6572 (4) | 0.5327 (4) | 0.9169 (3) | 0.0775 (15) | |
| H10 | 0.6963 | 0.5090 | 0.9760 | 0.093* | |
| C11 | 0.5653 (4) | 0.4833 (4) | 0.8767 (3) | 0.0718 (14) | |
| H11 | 0.5429 | 0.4249 | 0.9082 | 0.086* | |
| C12 | 0.5060 (4) | 0.5190 (3) | 0.7908 (3) | 0.0564 (11) | |
| H12 | 0.4430 | 0.4858 | 0.7655 | 0.068* | |
| C13 | 0.5391 (3) | 0.6045 (3) | 0.7405 (3) | 0.0477 (10) | |
| C14 | 0.4310 (3) | 0.7560 (3) | 0.4149 (3) | 0.0501 (10) | |
| H14A | 0.5038 | 0.7567 | 0.4103 | 0.060* | |
| H14B | 0.4092 | 0.8292 | 0.4217 | 0.060* | |
| C15 | 0.3672 (3) | 0.7076 (3) | 0.3242 (3) | 0.0519 (10) | |
| H15A | 0.3912 | 0.6354 | 0.3162 | 0.062* | |
| H15B | 0.3760 | 0.7491 | 0.2679 | 0.062* | |
| C16 | 0.2418 (3) | 0.6465 (3) | 0.4204 (3) | 0.0472 (10) | |
| H16A | 0.2592 | 0.5718 | 0.4142 | 0.057* | |
| H16B | 0.1697 | 0.6503 | 0.4269 | 0.057* | |
| C17 | 0.3100 (3) | 0.6920 (3) | 0.5109 (3) | 0.0491 (10) | |
| H17A | 0.2876 | 0.7641 | 0.5220 | 0.059* | |
| H17B | 0.3037 | 0.6487 | 0.5670 | 0.059* | |
| C18 | 0.1943 (3) | 0.6514 (4) | 0.2394 (3) | 0.0634 (12) | |
| H18A | 0.2070 | 0.6898 | 0.1827 | 0.076* | |
| H18B | 0.2207 | 0.5793 | 0.2364 | 0.076* | |
| C19 | 0.0792 (4) | 0.6461 (4) | 0.2346 (3) | 0.0675 (13) | |
| H19A | 0.0563 | 0.7106 | 0.2625 | 0.081* | |
| H19B | 0.0431 | 0.6413 | 0.1671 | 0.081* | |
| C21 | −0.0675 (4) | 0.4476 (4) | 0.3412 (4) | 0.0770 (15) | |
| H21A | −0.0322 | 0.3870 | 0.3192 | 0.092* | |
| H21B | −0.0360 | 0.4607 | 0.4090 | 0.092* | |
| C22 | 0.0380 (8) | 0.8697 (5) | 0.4497 (6) | 0.119 (3) | |
| C23 | −0.0191 (6) | 0.9488 (5) | 0.4871 (6) | 0.119 (2) | |
| H23 | −0.0859 | 0.9320 | 0.4952 | 0.142* | |
| C20 | −0.0523 (3) | 0.5435 (4) | 0.2823 (4) | 0.0687 (13) | |
| H20A | −0.0884 | 0.5340 | 0.2152 | 0.082* | |
| H20B | −0.0802 | 0.6065 | 0.3084 | 0.082* | |
| N1 | 0.4694 (2) | 0.6414 (3) | 0.6578 (2) | 0.0464 (8) | |
| N2 | 0.4178 (2) | 0.6936 (3) | 0.4998 (2) | 0.0474 (8) | |
| N3 | 0.2541 (2) | 0.7051 (2) | 0.3299 (2) | 0.0464 (8) | |
| O1 | 0.2203 (2) | 0.8100 (2) | 0.3328 (2) | 0.0617 (8) | |
| O2 | 0.0553 (2) | 0.5560 (2) | 0.2866 (2) | 0.0664 (9) | |
| O3 | −0.1721 (3) | 0.4219 (3) | 0.3344 (3) | 0.0910 (12) | |
| H301 | −0.1962 | 0.3992 | 0.2796 | 0.136* | |
| O4 | 0.1258 (4) | 0.8974 (4) | 0.4401 (4) | 0.1291 (18) | |
| H401 | 0.1599 | 0.8556 | 0.4147 | 0.194* | |
| O5 | 0.0062 (6) | 0.7872 (6) | 0.4257 (6) | 0.195 (3) | |
| S1 | 0.67581 (9) | 0.76727 (9) | 0.72389 (9) | 0.0615 (4) |
| C1 | 0.049 (2) | 0.039 (2) | 0.044 (2) | −0.0020 (17) | 0.0103 (18) | −0.0027 (17) |
| C2 | 0.048 (2) | 0.038 (2) | 0.045 (2) | 0.0006 (17) | 0.0131 (18) | 0.0029 (17) |
| C3 | 0.055 (3) | 0.045 (2) | 0.048 (2) | 0.0017 (19) | 0.0126 (19) | 0.0013 (19) |
| C4 | 0.068 (3) | 0.053 (3) | 0.059 (3) | 0.015 (2) | 0.022 (2) | 0.011 (2) |
| C5 | 0.055 (3) | 0.081 (3) | 0.075 (3) | 0.015 (3) | 0.025 (2) | 0.012 (3) |
| C6 | 0.049 (3) | 0.068 (3) | 0.076 (3) | −0.003 (2) | 0.011 (2) | 0.004 (3) |
| C7 | 0.047 (2) | 0.046 (2) | 0.052 (2) | −0.0020 (18) | 0.0093 (18) | −0.0001 (18) |
| C8 | 0.058 (3) | 0.048 (2) | 0.050 (2) | 0.004 (2) | 0.008 (2) | −0.0079 (19) |
| C9 | 0.069 (3) | 0.069 (3) | 0.058 (3) | 0.014 (2) | −0.008 (2) | −0.010 (2) |
| C10 | 0.100 (4) | 0.073 (3) | 0.052 (3) | 0.024 (3) | −0.003 (3) | 0.008 (3) |
| C11 | 0.102 (4) | 0.059 (3) | 0.053 (3) | 0.013 (3) | 0.012 (3) | 0.009 (2) |
| C12 | 0.070 (3) | 0.050 (2) | 0.049 (2) | 0.000 (2) | 0.011 (2) | 0.002 (2) |
| C13 | 0.054 (3) | 0.047 (2) | 0.042 (2) | 0.0098 (19) | 0.0086 (18) | −0.0052 (18) |
| C14 | 0.051 (2) | 0.050 (2) | 0.050 (2) | −0.0017 (19) | 0.0119 (18) | 0.0117 (19) |
| C15 | 0.052 (3) | 0.057 (3) | 0.049 (2) | −0.002 (2) | 0.0166 (19) | 0.0071 (19) |
| C16 | 0.047 (2) | 0.048 (2) | 0.049 (2) | 0.0000 (18) | 0.0159 (18) | 0.0054 (18) |
| C17 | 0.041 (2) | 0.062 (2) | 0.045 (2) | 0.0010 (19) | 0.0085 (17) | 0.0048 (19) |
| C18 | 0.060 (3) | 0.079 (3) | 0.049 (2) | −0.014 (2) | 0.006 (2) | −0.007 (2) |
| C19 | 0.065 (3) | 0.070 (3) | 0.060 (3) | −0.012 (2) | −0.003 (2) | 0.004 (2) |
| C21 | 0.078 (4) | 0.069 (3) | 0.083 (3) | −0.025 (3) | 0.014 (3) | −0.020 (3) |
| C22 | 0.200 (9) | 0.055 (4) | 0.130 (6) | −0.020 (5) | 0.103 (6) | −0.027 (4) |
| C23 | 0.113 (6) | 0.108 (5) | 0.133 (6) | 0.004 (5) | 0.018 (4) | −0.013 (5) |
| C20 | 0.050 (3) | 0.065 (3) | 0.090 (4) | −0.011 (2) | 0.012 (2) | −0.018 (3) |
| N1 | 0.048 (2) | 0.0485 (19) | 0.0425 (18) | 0.0038 (15) | 0.0094 (15) | −0.0007 (15) |
| N2 | 0.0392 (18) | 0.059 (2) | 0.0435 (18) | 0.0003 (15) | 0.0064 (14) | 0.0105 (15) |
| N3 | 0.049 (2) | 0.0425 (18) | 0.0467 (18) | 0.0004 (15) | 0.0072 (15) | 0.0051 (14) |
| O1 | 0.065 (2) | 0.0447 (16) | 0.0709 (19) | 0.0053 (14) | 0.0028 (15) | 0.0099 (14) |
| O2 | 0.0531 (19) | 0.0605 (19) | 0.083 (2) | −0.0114 (15) | 0.0065 (15) | −0.0023 (17) |
| O3 | 0.087 (3) | 0.091 (3) | 0.108 (3) | −0.033 (2) | 0.051 (2) | −0.045 (2) |
| O4 | 0.103 (4) | 0.108 (4) | 0.163 (5) | 0.011 (3) | −0.003 (3) | −0.033 (3) |
| O5 | 0.197 (7) | 0.132 (5) | 0.292 (9) | −0.037 (5) | 0.133 (6) | −0.052 (6) |
| S1 | 0.0640 (8) | 0.0544 (7) | 0.0645 (7) | −0.0083 (5) | 0.0087 (5) | −0.0151 (6) |
| C1—N1 | 1.299 (5) | C15—H15A | 0.9700 |
| C1—N2 | 1.366 (5) | C15—H15B | 0.9700 |
| C1—C2 | 1.491 (5) | C16—N3 | 1.500 (5) |
| C2—C3 | 1.384 (5) | C16—C17 | 1.508 (5) |
| C2—C7 | 1.398 (5) | C16—H16A | 0.9700 |
| C3—C4 | 1.375 (6) | C16—H16B | 0.9700 |
| C3—H3 | 0.9300 | C17—N2 | 1.455 (5) |
| C4—C5 | 1.368 (6) | C17—H17A | 0.9700 |
| C4—H4 | 0.9300 | C17—H17B | 0.9700 |
| C5—C6 | 1.374 (6) | C18—C19 | 1.501 (6) |
| C5—H5 | 0.9300 | C18—N3 | 1.507 (5) |
| C6—C7 | 1.387 (6) | C18—H18A | 0.9700 |
| C6—H6 | 0.9300 | C18—H18B | 0.9700 |
| C7—S1 | 1.765 (4) | C19—O2 | 1.410 (5) |
| C8—C9 | 1.390 (6) | C19—H19A | 0.9700 |
| C8—C13 | 1.398 (6) | C19—H19B | 0.9700 |
| C8—S1 | 1.771 (4) | C21—O3 | 1.394 (5) |
| C9—C10 | 1.372 (7) | C21—C20 | 1.491 (7) |
| C9—H9 | 0.9300 | C21—H21A | 0.9700 |
| C10—C11 | 1.372 (7) | C21—H21B | 0.9700 |
| C10—H10 | 0.9300 | C22—O5 | 1.138 (8) |
| C11—C12 | 1.370 (6) | C22—O4 | 1.237 (8) |
| C11—H11 | 0.9300 | C22—C23 | 1.404 (9) |
| C12—C13 | 1.397 (6) | C23—C23i | 1.396 (13) |
| C12—H12 | 0.9300 | C23—H23 | 0.9300 |
| C13—N1 | 1.401 (5) | C20—O2 | 1.411 (5) |
| C14—N2 | 1.461 (5) | C20—H20A | 0.9700 |
| C14—C15 | 1.501 (5) | C20—H20B | 0.9700 |
| C14—H14A | 0.9700 | N3—O1 | 1.388 (4) |
| C14—H14B | 0.9700 | O3—H301 | 0.8200 |
| C15—N3 | 1.504 (5) | O4—H401 | 0.8139 |
| N1—C1—N2 | 117.2 (4) | N3—C16—H16B | 109.1 |
| N1—C1—C2 | 126.2 (3) | C17—C16—H16B | 109.1 |
| N2—C1—C2 | 116.2 (3) | H16A—C16—H16B | 107.9 |
| C3—C2—C7 | 119.2 (4) | N2—C17—C16 | 109.9 (3) |
| C3—C2—C1 | 119.8 (3) | N2—C17—H17A | 109.7 |
| C7—C2—C1 | 121.0 (3) | C16—C17—H17A | 109.7 |
| C4—C3—C2 | 120.7 (4) | N2—C17—H17B | 109.7 |
| C4—C3—H3 | 119.6 | C16—C17—H17B | 109.7 |
| C2—C3—H3 | 119.6 | H17A—C17—H17B | 108.2 |
| C5—C4—C3 | 120.0 (4) | C19—C18—N3 | 114.0 (4) |
| C5—C4—H4 | 120.0 | C19—C18—H18A | 108.8 |
| C3—C4—H4 | 120.0 | N3—C18—H18A | 108.8 |
| C4—C5—C6 | 120.4 (4) | C19—C18—H18B | 108.8 |
| C4—C5—H5 | 119.8 | N3—C18—H18B | 108.8 |
| C6—C5—H5 | 119.8 | H18A—C18—H18B | 107.7 |
| C5—C6—C7 | 120.4 (4) | O2—C19—C18 | 109.8 (4) |
| C5—C6—H6 | 119.8 | O2—C19—H19A | 109.7 |
| C7—C6—H6 | 119.8 | C18—C19—H19A | 109.7 |
| C6—C7—C2 | 119.2 (4) | O2—C19—H19B | 109.7 |
| C6—C7—S1 | 119.9 (3) | C18—C19—H19B | 109.7 |
| C2—C7—S1 | 120.8 (3) | H19A—C19—H19B | 108.2 |
| C9—C8—C13 | 119.7 (4) | O3—C21—C20 | 112.8 (5) |
| C9—C8—S1 | 120.0 (4) | O3—C21—H21A | 109.0 |
| C13—C8—S1 | 120.2 (3) | C20—C21—H21A | 109.0 |
| C10—C9—C8 | 120.8 (5) | O3—C21—H21B | 109.0 |
| C10—C9—H9 | 119.6 | C20—C21—H21B | 109.0 |
| C8—C9—H9 | 119.6 | H21A—C21—H21B | 107.8 |
| C11—C10—C9 | 119.6 (4) | O5—C22—O4 | 121.1 (8) |
| C11—C10—H10 | 120.2 | O5—C22—C23 | 123.8 (9) |
| C9—C10—H10 | 120.2 | O4—C22—C23 | 115.0 (7) |
| C12—C11—C10 | 120.7 (5) | C23i—C23—C22 | 123.5 (10) |
| C12—C11—H11 | 119.7 | C23i—C23—H23 | 118.3 |
| C10—C11—H11 | 119.7 | C22—C23—H23 | 118.3 |
| C11—C12—C13 | 120.9 (4) | O2—C20—C21 | 108.1 (4) |
| C11—C12—H12 | 119.6 | O2—C20—H20A | 110.1 |
| C13—C12—H12 | 119.6 | C21—C20—H20A | 110.1 |
| C12—C13—C8 | 118.2 (4) | O2—C20—H20B | 110.1 |
| C12—C13—N1 | 116.8 (4) | C21—C20—H20B | 110.1 |
| C8—C13—N1 | 124.6 (4) | H20A—C20—H20B | 108.4 |
| N2—C14—C15 | 109.5 (3) | C1—N1—C13 | 124.2 (3) |
| N2—C14—H14A | 109.8 | C1—N2—C17 | 120.4 (3) |
| C15—C14—H14A | 109.8 | C1—N2—C14 | 125.1 (3) |
| N2—C14—H14B | 109.8 | C17—N2—C14 | 111.9 (3) |
| C15—C14—H14B | 109.8 | O1—N3—C16 | 110.3 (3) |
| H14A—C14—H14B | 108.2 | O1—N3—C15 | 107.9 (3) |
| C14—C15—N3 | 110.7 (3) | C16—N3—C15 | 109.2 (3) |
| C14—C15—H15A | 109.5 | O1—N3—C18 | 109.3 (3) |
| N3—C15—H15A | 109.5 | C16—N3—C18 | 111.4 (3) |
| C14—C15—H15B | 109.5 | C15—N3—C18 | 108.5 (3) |
| N3—C15—H15B | 109.5 | C19—O2—C20 | 113.1 (4) |
| H15A—C15—H15B | 108.1 | C21—O3—H301 | 109.5 |
| N3—C16—C17 | 112.3 (3) | C22—O4—H401 | 118.3 |
| N3—C16—H16A | 109.1 | C7—S1—C8 | 97.02 (19) |
| C17—C16—H16A | 109.1 | ||
| N1—C1—C2—C3 | 125.9 (4) | O4—C22—C23—C23i | −0.5 (15) |
| N2—C1—C2—C3 | −46.7 (5) | O3—C21—C20—O2 | −174.3 (4) |
| N1—C1—C2—C7 | −53.2 (6) | N2—C1—N1—C13 | 175.3 (3) |
| N2—C1—C2—C7 | 134.2 (4) | C2—C1—N1—C13 | 2.7 (6) |
| C7—C2—C3—C4 | −3.0 (6) | C12—C13—N1—C1 | −137.1 (4) |
| C1—C2—C3—C4 | 177.8 (4) | C8—C13—N1—C1 | 50.3 (6) |
| C2—C3—C4—C5 | 0.2 (6) | N1—C1—N2—C17 | −1.1 (5) |
| C3—C4—C5—C6 | 3.3 (7) | C2—C1—N2—C17 | 172.2 (3) |
| C4—C5—C6—C7 | −3.9 (7) | N1—C1—N2—C14 | 158.9 (4) |
| C5—C6—C7—C2 | 1.0 (7) | C2—C1—N2—C14 | −27.8 (5) |
| C5—C6—C7—S1 | 178.8 (4) | C16—C17—N2—C1 | −139.4 (4) |
| C3—C2—C7—C6 | 2.4 (6) | C16—C17—N2—C14 | 58.1 (4) |
| C1—C2—C7—C6 | −178.4 (4) | C15—C14—N2—C1 | 137.9 (4) |
| C3—C2—C7—S1 | −175.4 (3) | C15—C14—N2—C17 | −60.6 (4) |
| C1—C2—C7—S1 | 3.7 (5) | C17—C16—N3—O1 | −64.5 (4) |
| C13—C8—C9—C10 | −0.2 (7) | C17—C16—N3—C15 | 54.0 (4) |
| S1—C8—C9—C10 | 177.5 (4) | C17—C16—N3—C18 | 173.9 (3) |
| C8—C9—C10—C11 | 0.5 (7) | C14—C15—N3—O1 | 64.2 (4) |
| C9—C10—C11—C12 | −1.3 (8) | C14—C15—N3—C16 | −55.8 (4) |
| C10—C11—C12—C13 | 1.8 (7) | C14—C15—N3—C18 | −177.5 (3) |
| C11—C12—C13—C8 | −1.5 (6) | C19—C18—N3—O1 | −61.1 (5) |
| C11—C12—C13—N1 | −174.6 (4) | C19—C18—N3—C16 | 61.1 (5) |
| C9—C8—C13—C12 | 0.7 (6) | C19—C18—N3—C15 | −178.6 (4) |
| S1—C8—C13—C12 | −177.0 (3) | C18—C19—O2—C20 | −177.8 (4) |
| C9—C8—C13—N1 | 173.3 (4) | C21—C20—O2—C19 | −178.9 (4) |
| S1—C8—C13—N1 | −4.5 (5) | C6—C7—S1—C8 | −116.3 (4) |
| N2—C14—C15—N3 | 59.1 (4) | C2—C7—S1—C8 | 61.6 (4) |
| N3—C16—C17—N2 | −55.0 (4) | C9—C8—S1—C7 | 119.6 (4) |
| N3—C18—C19—O2 | −84.5 (5) | C13—C8—S1—C7 | −62.6 (4) |
| O5—C22—C23—C23i | −177.4 (11) |
| H··· | ||||
| O4—H401···O1 | 0.81 | 1.62 | 2.394 (6) | 157 |
| O3—H301···O1ii | 0.82 | 1.90 | 2.691 (4) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H401⋯O1 | 0.81 | 1.62 | 2.394 (6) | 157 |
| O3—H301⋯O1i | 0.82 | 1.90 | 2.691 (4) | 161 |
Symmetry code: (i) .