| Literature DB >> 22719475 |
Hoong-Kun Fun, Ching Kheng Quah, Hatem A Abdel-Aziz, Mohamed I Attia.
Abstract
In the title compound, C(11)H(9)BrN(4)S, the 1,2,4-triazole ring is essentially planar (r.m.s. deviation = 0.020 Å) and makes a dihedral angle of 29.1 (5)° with the bromo-benzene ring. The 3,6-dihydro-1,3,4-thia-diazine ring adopts a twist-boat conformation. In the crystal, mol-ecules are linked by C-H⋯N inter-actions into sheets lying parallel to the (010) plane. The same N atom accepts two such hydrogen bonds.Entities:
Year: 2012 PMID: 22719475 PMCID: PMC3379277 DOI: 10.1107/S1600536812019885
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H9BrN4S | |
| Monoclinic, | Mo |
| Hall symbol: P -2yc | Cell parameters from 2139 reflections |
| θ = 2.4–27.8° | |
| µ = 3.71 mm−1 | |
| β = 99.650 (5)° | Plate, colourless |
| 0.46 × 0.10 × 0.03 mm | |
| Bruker SMART APEXII CCD diffractometer | 2087 independent reflections |
| Radiation source: fine-focus sealed tube | 1904 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 5127 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2087 reflections | Δρmax = 3.33 e Å−3 |
| 149 parameters | Δρmin = −0.86 e Å−3 |
| 2 restraints | Absolute structure: Flack (1983), 950 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.01 (2) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.0080 (5) | −0.00421 (15) | 0.6539 (3) | 0.0264 (5) | |
| Br1 | 0.93512 (13) | 0.44899 (5) | 1.15745 (9) | 0.0234 (3) | |
| N1 | −0.0050 (18) | 0.2320 (5) | 0.6525 (9) | 0.0191 (15) | |
| N2 | −0.2131 (19) | 0.1740 (6) | 0.5631 (6) | 0.0203 (16) | |
| N3 | −0.420 (2) | 0.0529 (5) | 0.4417 (8) | 0.0308 (18) | |
| N4 | −0.5398 (18) | 0.1444 (6) | 0.3863 (7) | 0.0288 (16) | |
| C1 | 0.406 (2) | 0.2109 (6) | 0.9745 (7) | 0.0188 (15) | |
| H1A | 0.3374 | 0.1478 | 0.9953 | 0.023* | |
| C2 | 0.592 (2) | 0.2704 (6) | 1.0655 (7) | 0.0212 (16) | |
| H2A | 0.6494 | 0.2466 | 1.1462 | 0.025* | |
| C3 | 0.6906 (19) | 0.3639 (6) | 1.0365 (7) | 0.0193 (16) | |
| C4 | 0.622 (2) | 0.3988 (6) | 0.9129 (7) | 0.0215 (16) | |
| H4A | 0.7033 | 0.4603 | 0.8919 | 0.026* | |
| C5 | 0.4312 (19) | 0.3397 (6) | 0.8237 (7) | 0.0175 (15) | |
| H5A | 0.3756 | 0.3639 | 0.7432 | 0.021* | |
| C6 | 0.319 (2) | 0.2450 (7) | 0.8506 (8) | 0.0194 (18) | |
| C7 | 0.106 (2) | 0.1867 (6) | 0.7562 (8) | 0.0178 (18) | |
| C8 | 0.006 (2) | 0.0807 (7) | 0.7828 (9) | 0.0220 (18) | |
| H8A | −0.2194 | 0.0815 | 0.8044 | 0.026* | |
| H8B | 0.1608 | 0.0559 | 0.8540 | 0.026* | |
| C9 | −0.225 (3) | 0.0749 (8) | 0.5464 (9) | 0.026 (2) | |
| C10 | −0.406 (2) | 0.2173 (7) | 0.4581 (9) | 0.0256 (14) | |
| C11 | −0.458 (2) | 0.3240 (7) | 0.4400 (9) | 0.0256 (14) | |
| H11A | −0.5670 | 0.3365 | 0.3564 | 0.038* | |
| H11B | −0.2431 | 0.3574 | 0.4552 | 0.038* | |
| H11C | −0.5981 | 0.3484 | 0.4966 | 0.038* |
| S1 | 0.0275 (13) | 0.0247 (10) | 0.0279 (10) | 0.0019 (7) | 0.0075 (10) | −0.0060 (9) |
| Br1 | 0.0201 (4) | 0.0356 (4) | 0.0131 (4) | −0.0002 (4) | −0.0007 (2) | −0.0050 (4) |
| N1 | 0.013 (4) | 0.025 (3) | 0.018 (3) | 0.002 (2) | −0.001 (3) | −0.005 (3) |
| N2 | 0.025 (4) | 0.028 (4) | 0.008 (3) | 0.002 (3) | 0.002 (3) | 0.002 (3) |
| N3 | 0.033 (5) | 0.038 (4) | 0.022 (4) | −0.006 (3) | 0.006 (3) | −0.010 (3) |
| N4 | 0.025 (4) | 0.047 (5) | 0.017 (3) | −0.005 (3) | 0.009 (3) | −0.007 (3) |
| C1 | 0.024 (4) | 0.023 (4) | 0.009 (4) | −0.001 (3) | 0.003 (3) | 0.002 (3) |
| C2 | 0.020 (4) | 0.032 (4) | 0.011 (4) | 0.007 (3) | 0.001 (3) | −0.003 (3) |
| C3 | 0.015 (4) | 0.029 (4) | 0.014 (4) | 0.006 (3) | 0.004 (3) | 0.001 (3) |
| C4 | 0.022 (4) | 0.026 (4) | 0.016 (4) | 0.002 (3) | 0.003 (3) | 0.004 (3) |
| C5 | 0.017 (4) | 0.027 (4) | 0.008 (3) | 0.001 (3) | 0.002 (3) | 0.001 (3) |
| C6 | 0.023 (4) | 0.029 (4) | 0.007 (4) | 0.006 (3) | 0.003 (3) | 0.000 (3) |
| C7 | 0.026 (5) | 0.013 (4) | 0.017 (5) | 0.006 (3) | 0.009 (4) | 0.001 (3) |
| C8 | 0.027 (5) | 0.018 (4) | 0.022 (5) | −0.003 (3) | 0.009 (4) | 0.001 (3) |
| C9 | 0.025 (5) | 0.032 (5) | 0.020 (5) | −0.003 (3) | 0.005 (4) | −0.006 (3) |
| C10 | 0.015 (3) | 0.048 (4) | 0.016 (3) | −0.004 (3) | 0.007 (2) | 0.000 (3) |
| C11 | 0.015 (3) | 0.048 (4) | 0.016 (3) | −0.004 (3) | 0.007 (2) | 0.000 (3) |
| S1—C9 | 1.737 (11) | C2—H2A | 0.9300 |
| S1—C8 | 1.813 (10) | C3—C4 | 1.413 (11) |
| Br1—C3 | 1.892 (8) | C4—C5 | 1.384 (11) |
| N1—C7 | 1.298 (13) | C4—H4A | 0.9300 |
| N1—N2 | 1.408 (11) | C5—C6 | 1.395 (13) |
| N2—C9 | 1.342 (14) | C5—H5A | 0.9300 |
| N2—C10 | 1.399 (12) | C6—C7 | 1.454 (12) |
| N3—C9 | 1.307 (13) | C7—C8 | 1.519 (13) |
| N3—N4 | 1.417 (11) | C8—H8A | 0.9700 |
| N4—C10 | 1.311 (12) | C8—H8B | 0.9700 |
| C1—C2 | 1.391 (11) | C10—C11 | 1.455 (14) |
| C1—C6 | 1.417 (11) | C11—H11A | 0.9600 |
| C1—H1A | 0.9300 | C11—H11B | 0.9600 |
| C2—C3 | 1.370 (12) | C11—H11C | 0.9600 |
| C9—S1—C8 | 94.0 (4) | C5—C6—C7 | 120.8 (7) |
| C7—N1—N2 | 115.1 (6) | C1—C6—C7 | 121.7 (8) |
| C9—N2—C10 | 107.4 (8) | N1—C7—C6 | 116.3 (8) |
| C9—N2—N1 | 130.2 (8) | N1—C7—C8 | 122.9 (8) |
| C10—N2—N1 | 121.4 (8) | C6—C7—C8 | 120.7 (8) |
| C9—N3—N4 | 106.7 (7) | C7—C8—S1 | 113.8 (7) |
| C10—N4—N3 | 108.5 (7) | C7—C8—H8A | 108.8 |
| C2—C1—C6 | 121.0 (8) | S1—C8—H8A | 108.8 |
| C2—C1—H1A | 119.5 | C7—C8—H8B | 108.8 |
| C6—C1—H1A | 119.5 | S1—C8—H8B | 108.8 |
| C3—C2—C1 | 120.1 (8) | H8A—C8—H8B | 107.7 |
| C3—C2—H2A | 120.0 | N3—C9—N2 | 110.2 (9) |
| C1—C2—H2A | 120.0 | N3—C9—S1 | 129.0 (8) |
| C2—C3—C4 | 120.5 (7) | N2—C9—S1 | 120.7 (7) |
| C2—C3—Br1 | 121.8 (6) | N4—C10—N2 | 107.1 (9) |
| C4—C3—Br1 | 117.7 (6) | N4—C10—C11 | 128.2 (9) |
| C5—C4—C3 | 118.7 (7) | N2—C10—C11 | 124.6 (8) |
| C5—C4—H4A | 120.6 | C10—C11—H11A | 109.5 |
| C3—C4—H4A | 120.6 | C10—C11—H11B | 109.5 |
| C4—C5—C6 | 122.2 (7) | H11A—C11—H11B | 109.5 |
| C4—C5—H5A | 118.9 | C10—C11—H11C | 109.5 |
| C6—C5—H5A | 118.9 | H11A—C11—H11C | 109.5 |
| C5—C6—C1 | 117.4 (8) | H11B—C11—H11C | 109.5 |
| C7—N1—N2—C9 | −26.3 (14) | C1—C6—C7—C8 | −8.3 (13) |
| C7—N1—N2—C10 | 166.6 (8) | N1—C7—C8—S1 | 43.3 (11) |
| C9—N3—N4—C10 | 1.6 (11) | C6—C7—C8—S1 | −140.3 (7) |
| C6—C1—C2—C3 | 0.9 (12) | C9—S1—C8—C7 | −48.8 (7) |
| C1—C2—C3—C4 | −3.7 (12) | N4—N3—C9—N2 | 0.5 (11) |
| C1—C2—C3—Br1 | 178.6 (6) | N4—N3—C9—S1 | −177.5 (7) |
| C2—C3—C4—C5 | 4.8 (12) | C10—N2—C9—N3 | −2.2 (12) |
| Br1—C3—C4—C5 | −177.3 (6) | N1—N2—C9—N3 | −170.6 (9) |
| C3—C4—C5—C6 | −3.3 (12) | C10—N2—C9—S1 | 176.0 (7) |
| C4—C5—C6—C1 | 0.6 (13) | N1—N2—C9—S1 | 7.5 (14) |
| C4—C5—C6—C7 | 177.0 (7) | C8—S1—C9—N3 | −154.5 (10) |
| C2—C1—C6—C5 | 0.7 (13) | C8—S1—C9—N2 | 27.7 (9) |
| C2—C1—C6—C7 | −175.7 (8) | N3—N4—C10—N2 | −2.8 (10) |
| N2—N1—C7—C6 | −179.6 (7) | N3—N4—C10—C11 | −179.4 (9) |
| N2—N1—C7—C8 | −3.0 (13) | C9—N2—C10—N4 | 3.1 (10) |
| C5—C6—C7—N1 | −7.9 (13) | N1—N2—C10—N4 | 172.8 (8) |
| C1—C6—C7—N1 | 168.4 (9) | C9—N2—C10—C11 | 179.8 (9) |
| C5—C6—C7—C8 | 175.5 (9) | N1—N2—C10—C11 | −10.5 (13) |
| H··· | ||||
| C8—H8 | 0.97 | 2.56 | 3.185 (12) | 122 |
| C8—H8 | 0.97 | 2.31 | 3.191 (12) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8 | 0.97 | 2.56 | 3.185 (12) | 122 |
| C8—H8 | 0.97 | 2.31 | 3.191 (12) | 151 |
Symmetry codes: (i) ; (ii) .