| Literature DB >> 22719428 |
Abstract
In the title compound, 2C(6)H(4)N(2)·C(2)H(2)O(4), the oxalic acid mol-ecule lies about an inversion center. The pyridine ring of the pyridine-4-carbonitrile mol-ecule is almost planar, the largest deviation from the least-squares plane being 0.006 (1) Å; the nitrile N atom deviates from this plane by 0.114 (1) Å. In the crystal, the oxalic acid mol-ecules and the pyridine-4-carbonitrile mol-ecules form stacks. Neighboring mol-ecules within the stacks are related by translation in the a direction, with inter-planar distances of 3.183 (1) and 3.331 (2) Å, respectively. Each oxalic acid mol-ecule forms strong O-H⋯N hydrogen bonds with two mol-ecules of pyridine-4-carbonitrile. Besides this, there are also weak C-H⋯O inter-actions.Entities:
Year: 2012 PMID: 22719428 PMCID: PMC3379230 DOI: 10.1107/S1600536812019137
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H4N2·0.5C2H2O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1528 reflections | |
| θ = 2.9–27.5° | |
| µ = 0.11 mm−1 | |
| α = 78.258 (1)° | |
| β = 85.301 (1)° | Block, colourless |
| γ = 82.547 (1)° | 0.10 × 0.03 × 0.03 mm |
| Rigaku SCXmini Mercury2 diffractometer | 1528 independent reflections |
| Radiation source: fine-focus sealed tube | 1268 reflections with |
| Graphite monochromator | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 2.9° |
| ω scans CCD profile fitting | |
| Absorption correction: multi-scan ( | |
| 3634 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1528 reflections | (Δ/σ)max < 0.001 |
| 103 parameters | Δρmax = 0.46 e Å−3 |
| 1 restraint | Δρmin = −0.27 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.8019 (2) | 0.10266 (10) | 0.37597 (6) | 0.0195 (2) | |
| H1 | 0.753 (4) | 0.2095 (6) | 0.3465 (11) | 0.029* | |
| O2 | 1.0250 (2) | 0.22804 (10) | 0.50208 (6) | 0.0196 (2) | |
| N1 | 0.6137 (3) | 0.43796 (12) | 0.27800 (8) | 0.0157 (2) | |
| N2 | 0.1419 (3) | 1.12502 (13) | 0.09513 (8) | 0.0207 (2) | |
| C4 | 0.5310 (3) | 0.75440 (15) | 0.28546 (9) | 0.0147 (3) | |
| H4A | 0.5545 | 0.8461 | 0.3231 | 0.018* | |
| C1 | 0.4759 (3) | 0.47781 (15) | 0.17793 (9) | 0.0158 (3) | |
| H1A | 0.4592 | 0.3835 | 0.1417 | 0.019* | |
| C3 | 0.3848 (3) | 0.79346 (14) | 0.18234 (9) | 0.0141 (3) | |
| C5 | 0.6404 (3) | 0.57355 (15) | 0.33014 (9) | 0.0152 (3) | |
| H5A | 0.7362 | 0.5455 | 0.3992 | 0.018* | |
| C2 | 0.3578 (3) | 0.65365 (14) | 0.12654 (9) | 0.0150 (3) | |
| H2A | 0.2638 | 0.6777 | 0.0573 | 0.018* | |
| C6 | 0.2532 (3) | 0.97886 (14) | 0.13355 (9) | 0.0161 (3) | |
| C7 | 0.9557 (3) | 0.09891 (14) | 0.46785 (8) | 0.0140 (3) |
| O1 | 0.0299 (5) | 0.0114 (4) | 0.0174 (4) | −0.0004 (3) | −0.0102 (4) | −0.0010 (3) |
| O2 | 0.0269 (5) | 0.0140 (4) | 0.0189 (4) | −0.0026 (3) | −0.0066 (3) | −0.0033 (3) |
| N1 | 0.0164 (5) | 0.0147 (5) | 0.0158 (5) | −0.0021 (4) | −0.0022 (4) | −0.0020 (4) |
| N2 | 0.0244 (6) | 0.0171 (5) | 0.0210 (5) | −0.0016 (4) | −0.0067 (4) | −0.0029 (4) |
| C4 | 0.0142 (5) | 0.0151 (5) | 0.0159 (5) | −0.0027 (4) | −0.0002 (4) | −0.0049 (4) |
| C1 | 0.0169 (6) | 0.0153 (5) | 0.0164 (5) | −0.0030 (4) | −0.0017 (4) | −0.0048 (4) |
| C3 | 0.0118 (5) | 0.0130 (5) | 0.0167 (5) | −0.0018 (4) | −0.0004 (4) | −0.0011 (4) |
| C5 | 0.0157 (5) | 0.0169 (6) | 0.0131 (5) | −0.0027 (4) | −0.0025 (4) | −0.0019 (4) |
| C2 | 0.0156 (6) | 0.0169 (6) | 0.0126 (5) | −0.0025 (4) | −0.0023 (4) | −0.0024 (4) |
| C6 | 0.0162 (6) | 0.0177 (6) | 0.0155 (5) | −0.0043 (4) | −0.0014 (4) | −0.0042 (4) |
| C7 | 0.0144 (5) | 0.0143 (5) | 0.0131 (5) | −0.0010 (4) | −0.0012 (4) | −0.0024 (4) |
| O1—C7 | 1.3113 (12) | C4—H4A | 0.9300 |
| O1—H1 | 0.822 (2) | C1—C2 | 1.3871 (15) |
| O2—C7 | 1.2075 (13) | C1—H1A | 0.9300 |
| N1—C5 | 1.3403 (14) | C3—C2 | 1.3981 (15) |
| N1—C1 | 1.3462 (13) | C3—C6 | 1.4505 (14) |
| N2—C6 | 1.1503 (14) | C5—H5A | 0.9300 |
| C4—C5 | 1.3910 (15) | C2—H2A | 0.9300 |
| C4—C3 | 1.3940 (14) | C7—C7i | 1.557 (2) |
| C7—O1—H1 | 107.8 (11) | N1—C5—C4 | 122.85 (10) |
| C5—N1—C1 | 118.83 (9) | N1—C5—H5A | 118.6 |
| C5—C4—C3 | 117.70 (10) | C4—C5—H5A | 118.6 |
| C5—C4—H4A | 121.1 | C1—C2—C3 | 117.75 (10) |
| C3—C4—H4A | 121.1 | C1—C2—H2A | 121.1 |
| N1—C1—C2 | 122.74 (10) | C3—C2—H2A | 121.1 |
| N1—C1—H1A | 118.6 | N2—C6—C3 | 178.67 (12) |
| C2—C1—H1A | 118.6 | O2—C7—O1 | 126.63 (10) |
| C4—C3—C2 | 120.13 (10) | O2—C7—C7i | 121.93 (12) |
| C4—C3—C6 | 120.12 (9) | O1—C7—C7i | 111.44 (11) |
| C2—C3—C6 | 119.74 (10) |
| H··· | ||||
| O1—H1···N1 | 0.82 (1) | 1.80 (1) | 2.6173 (12) | 176 (2) |
| C4—H4 | 0.93 | 2.48 | 3.3640 (13) | 160 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 (1) | 1.80 (1) | 2.6173 (12) | 176 (2) |
| C4—H4 | 0.93 | 2.48 | 3.3640 (13) | 160 |
Symmetry code: (i) .