Literature DB >> 22719428

Oxalic acid-pyridine-4-carbonitrile (1/2).

Wen-Ni Zheng1.   

Abstract

In the title compound, 2C(6)H(4)N(2)·C(2)H(2)O(4), the oxalic acid mol-ecule lies about an inversion center. The pyridine ring of the pyridine-4-carbonitrile mol-ecule is almost planar, the largest deviation from the least-squares plane being 0.006 (1) Å; the nitrile N atom deviates from this plane by 0.114 (1) Å. In the crystal, the oxalic acid mol-ecules and the pyridine-4-carbonitrile mol-ecules form stacks. Neighboring mol-ecules within the stacks are related by translation in the a direction, with inter-planar distances of 3.183 (1) and 3.331 (2) Å, respectively. Each oxalic acid mol-ecule forms strong O-H⋯N hydrogen bonds with two mol-ecules of pyridine-4-carbonitrile. Besides this, there are also weak C-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 22719428      PMCID: PMC3379230          DOI: 10.1107/S1600536812019137

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures and ferroelectric properties of related compounds, see: Fu et al. (2011a ▶,b ▶,c ▶); Dai & Chen (2011 ▶); Xu et al. (2011 ▶); Zheng (2011 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C6H4N2·0.5C2H2O4 M = 149.13 Triclinic, a = 3.6842 (6) Å b = 7.5816 (5) Å c = 12.4511 (1) Å α = 78.258 (1)° β = 85.301 (1)° γ = 82.547 (1)° V = 337.08 (6) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.10 × 0.03 × 0.03 mm

Data collection

Rigaku SCXmini Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.910, T max = 1.000 3634 measured reflections 1528 independent reflections 1268 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.101 S = 1.04 1528 reflections 103 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812019137/yk2054sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812019137/yk2054Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812019137/yk2054Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H4N2·0.5C2H2O4Z = 2
Mr = 149.13F(000) = 154
Triclinic, P1Dx = 1.469 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 3.6842 (6) ÅCell parameters from 1528 reflections
b = 7.5816 (5) Åθ = 2.9–27.5°
c = 12.4511 (1) ŵ = 0.11 mm1
α = 78.258 (1)°T = 298 K
β = 85.301 (1)°Block, colourless
γ = 82.547 (1)°0.10 × 0.03 × 0.03 mm
V = 337.08 (6) Å3
Rigaku SCXmini Mercury2 diffractometer1528 independent reflections
Radiation source: fine-focus sealed tube1268 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 2.9°
ω scans CCD profile fittingh = −4→4
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −9→9
Tmin = 0.910, Tmax = 1.000l = −16→16
3634 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.065P)2] where P = (Fo2 + 2Fc2)/3
1528 reflections(Δ/σ)max < 0.001
103 parametersΔρmax = 0.46 e Å3
1 restraintΔρmin = −0.27 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.8019 (2)0.10266 (10)0.37597 (6)0.0195 (2)
H10.753 (4)0.2095 (6)0.3465 (11)0.029*
O21.0250 (2)0.22804 (10)0.50208 (6)0.0196 (2)
N10.6137 (3)0.43796 (12)0.27800 (8)0.0157 (2)
N20.1419 (3)1.12502 (13)0.09513 (8)0.0207 (2)
C40.5310 (3)0.75440 (15)0.28546 (9)0.0147 (3)
H4A0.55450.84610.32310.018*
C10.4759 (3)0.47781 (15)0.17793 (9)0.0158 (3)
H1A0.45920.38350.14170.019*
C30.3848 (3)0.79346 (14)0.18234 (9)0.0141 (3)
C50.6404 (3)0.57355 (15)0.33014 (9)0.0152 (3)
H5A0.73620.54550.39920.018*
C20.3578 (3)0.65365 (14)0.12654 (9)0.0150 (3)
H2A0.26380.67770.05730.018*
C60.2532 (3)0.97886 (14)0.13355 (9)0.0161 (3)
C70.9557 (3)0.09891 (14)0.46785 (8)0.0140 (3)
U11U22U33U12U13U23
O10.0299 (5)0.0114 (4)0.0174 (4)−0.0004 (3)−0.0102 (4)−0.0010 (3)
O20.0269 (5)0.0140 (4)0.0189 (4)−0.0026 (3)−0.0066 (3)−0.0033 (3)
N10.0164 (5)0.0147 (5)0.0158 (5)−0.0021 (4)−0.0022 (4)−0.0020 (4)
N20.0244 (6)0.0171 (5)0.0210 (5)−0.0016 (4)−0.0067 (4)−0.0029 (4)
C40.0142 (5)0.0151 (5)0.0159 (5)−0.0027 (4)−0.0002 (4)−0.0049 (4)
C10.0169 (6)0.0153 (5)0.0164 (5)−0.0030 (4)−0.0017 (4)−0.0048 (4)
C30.0118 (5)0.0130 (5)0.0167 (5)−0.0018 (4)−0.0004 (4)−0.0011 (4)
C50.0157 (5)0.0169 (6)0.0131 (5)−0.0027 (4)−0.0025 (4)−0.0019 (4)
C20.0156 (6)0.0169 (6)0.0126 (5)−0.0025 (4)−0.0023 (4)−0.0024 (4)
C60.0162 (6)0.0177 (6)0.0155 (5)−0.0043 (4)−0.0014 (4)−0.0042 (4)
C70.0144 (5)0.0143 (5)0.0131 (5)−0.0010 (4)−0.0012 (4)−0.0024 (4)
O1—C71.3113 (12)C4—H4A0.9300
O1—H10.822 (2)C1—C21.3871 (15)
O2—C71.2075 (13)C1—H1A0.9300
N1—C51.3403 (14)C3—C21.3981 (15)
N1—C11.3462 (13)C3—C61.4505 (14)
N2—C61.1503 (14)C5—H5A0.9300
C4—C51.3910 (15)C2—H2A0.9300
C4—C31.3940 (14)C7—C7i1.557 (2)
C7—O1—H1107.8 (11)N1—C5—C4122.85 (10)
C5—N1—C1118.83 (9)N1—C5—H5A118.6
C5—C4—C3117.70 (10)C4—C5—H5A118.6
C5—C4—H4A121.1C1—C2—C3117.75 (10)
C3—C4—H4A121.1C1—C2—H2A121.1
N1—C1—C2122.74 (10)C3—C2—H2A121.1
N1—C1—H1A118.6N2—C6—C3178.67 (12)
C2—C1—H1A118.6O2—C7—O1126.63 (10)
C4—C3—C2120.13 (10)O2—C7—C7i121.93 (12)
C4—C3—C6120.12 (9)O1—C7—C7i111.44 (11)
C2—C3—C6119.74 (10)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.82 (1)1.80 (1)2.6173 (12)176 (2)
C4—H4A···O1ii0.932.483.3640 (13)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.82 (1)1.80 (1)2.6173 (12)176 (2)
C4—H4A⋯O1i0.932.483.3640 (13)160

Symmetry code: (i) .

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