| Literature DB >> 22719369 |
Lining Yang, Yanxiang Zhi, Jiahui Hei, Yanqing Miao.
Abstract
The asymmetric unit of the title compound, [Mn(C(6)H(6)N(4))(2)(H(2)O)(2)](C(8)H(4)O(4)), contains one-half each of the centrosymmetric cation and anion. The Mn(II) atom is coordinated by four N atoms [Mn-N = 2.2168 (14) and 2.2407 (14) Å] from two 2,2'-biimidazole ligands and two water mol-ecules [Mn-O = 2.2521 (14) Å] in a distorted octa-hedral geometry. Inter-molecular N-H⋯O and O-H⋯O hydrogen bonds consol-idate the crystal packing, which also exhibits π-π inter-actions between five-membered rings, with a centroid-centroid distance of 3.409 (2) Å.Entities:
Year: 2012 PMID: 22719369 PMCID: PMC3379148 DOI: 10.1107/S160053681202199X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(C6H6N4)2(H2O)2](C8H4O4) | |
| Monoclinic, | Mo |
| Cell parameters from 2178 reflections | |
| θ = 3.0–26.9° | |
| µ = 0.63 mm−1 | |
| β = 93.986 (2)° | |
| Block, yellow | |
| 0.46 × 0.19 × 0.07 mm |
| Bruker SMART CCD area-detector diffractometer | 2024 independent reflections |
| Radiation source: fine-focus sealed tube | 1712 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.1°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 5689 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2024 reflections | Δρmax = 0.20 e Å−3 |
| 167 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0048 (12) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.0000 | 0.5000 | 0.5000 | 0.02879 (15) | |
| N1 | 0.24692 (16) | 0.58566 (12) | 0.51483 (10) | 0.0273 (3) | |
| N2 | 0.48208 (17) | 0.58683 (13) | 0.60838 (11) | 0.0289 (3) | |
| H2A | 0.5580 | 0.5673 | 0.6552 | 0.035* | |
| N3 | 0.12437 (17) | 0.39115 (14) | 0.62924 (11) | 0.0316 (4) | |
| N4 | 0.34624 (18) | 0.37195 (14) | 0.73441 (11) | 0.0354 (4) | |
| H4 | 0.4422 | 0.3851 | 0.7628 | 0.042* | |
| O1 | 0.62726 (17) | 0.39434 (14) | 0.85633 (11) | 0.0517 (4) | |
| O2 | 0.72528 (16) | 0.54524 (15) | 0.76328 (11) | 0.0501 (4) | |
| O3 | 0.08176 (19) | 0.36279 (14) | 0.38200 (11) | 0.0431 (4) | |
| C1 | 0.3431 (2) | 0.67589 (16) | 0.47712 (14) | 0.0322 (4) | |
| H1 | 0.3136 | 0.7280 | 0.4210 | 0.039* | |
| C2 | 0.4879 (2) | 0.67729 (16) | 0.53438 (14) | 0.0335 (4) | |
| H2 | 0.5744 | 0.7298 | 0.5250 | 0.040* | |
| C3 | 0.3359 (2) | 0.53425 (15) | 0.59437 (13) | 0.0248 (4) | |
| C4 | 0.2721 (2) | 0.43418 (15) | 0.65354 (12) | 0.0272 (4) | |
| C5 | 0.2410 (2) | 0.28425 (19) | 0.76286 (16) | 0.0432 (5) | |
| H5 | 0.2592 | 0.2268 | 0.8166 | 0.052* | |
| C6 | 0.1051 (2) | 0.29636 (18) | 0.69827 (15) | 0.0403 (5) | |
| H6 | 0.0128 | 0.2479 | 0.7003 | 0.048* | |
| C7 | 0.7311 (2) | 0.47488 (17) | 0.84132 (14) | 0.0342 (4) | |
| C8 | 0.8711 (2) | 0.48881 (15) | 0.92349 (14) | 0.0297 (4) | |
| C9 | 0.8507 (2) | 0.45947 (17) | 1.02814 (14) | 0.0337 (4) | |
| H9 | 0.7504 | 0.4323 | 1.0476 | 0.040* | |
| C10 | 0.9791 (2) | 0.47042 (17) | 1.10393 (14) | 0.0345 (4) | |
| H10 | 0.9643 | 0.4502 | 1.1739 | 0.041* | |
| H3A | 0.135 (3) | 0.390 (3) | 0.330 (2) | 0.080* | |
| H3B | 0.104 (3) | 0.292 (3) | 0.391 (2) | 0.080* |
| Mn1 | 0.0234 (2) | 0.0332 (2) | 0.0286 (2) | −0.00110 (16) | −0.00624 (14) | 0.00314 (16) |
| N1 | 0.0261 (8) | 0.0281 (8) | 0.0272 (7) | 0.0002 (6) | −0.0017 (6) | 0.0020 (6) |
| N2 | 0.0229 (8) | 0.0310 (8) | 0.0321 (8) | −0.0009 (6) | −0.0041 (6) | −0.0006 (6) |
| N3 | 0.0259 (8) | 0.0362 (9) | 0.0316 (8) | −0.0039 (7) | −0.0047 (6) | 0.0066 (6) |
| N4 | 0.0290 (8) | 0.0414 (9) | 0.0342 (8) | −0.0042 (7) | −0.0085 (6) | 0.0097 (7) |
| O1 | 0.0465 (9) | 0.0514 (9) | 0.0536 (9) | −0.0173 (7) | −0.0224 (7) | 0.0128 (7) |
| O2 | 0.0357 (8) | 0.0730 (10) | 0.0397 (8) | −0.0108 (7) | −0.0124 (6) | 0.0198 (7) |
| O3 | 0.0497 (9) | 0.0394 (8) | 0.0410 (8) | −0.0008 (7) | 0.0093 (6) | −0.0038 (7) |
| C1 | 0.0342 (10) | 0.0297 (10) | 0.0327 (9) | 0.0005 (8) | 0.0015 (8) | 0.0055 (8) |
| C2 | 0.0306 (10) | 0.0300 (10) | 0.0404 (10) | −0.0061 (8) | 0.0045 (8) | 0.0008 (8) |
| C3 | 0.0229 (9) | 0.0249 (9) | 0.0261 (8) | 0.0011 (7) | −0.0007 (7) | −0.0022 (7) |
| C4 | 0.0260 (9) | 0.0291 (9) | 0.0261 (9) | 0.0005 (7) | −0.0026 (7) | 0.0014 (7) |
| C5 | 0.0409 (11) | 0.0451 (12) | 0.0426 (11) | −0.0073 (9) | −0.0056 (9) | 0.0216 (9) |
| C6 | 0.0327 (10) | 0.0434 (12) | 0.0439 (11) | −0.0111 (9) | −0.0035 (8) | 0.0144 (9) |
| C7 | 0.0289 (10) | 0.0397 (11) | 0.0331 (10) | −0.0006 (8) | −0.0055 (8) | −0.0006 (8) |
| C8 | 0.0299 (10) | 0.0273 (9) | 0.0308 (9) | 0.0027 (7) | −0.0066 (7) | −0.0007 (7) |
| C9 | 0.0268 (10) | 0.0384 (10) | 0.0354 (10) | −0.0015 (8) | −0.0021 (7) | 0.0008 (8) |
| C10 | 0.0354 (11) | 0.0398 (11) | 0.0274 (9) | −0.0008 (8) | −0.0026 (8) | 0.0010 (8) |
| Mn1—N3 | 2.2168 (14) | O2—C7 | 1.250 (2) |
| Mn1—N3i | 2.2168 (14) | O3—H3A | 0.87 (3) |
| Mn1—N1 | 2.2407 (14) | O3—H3B | 0.80 (3) |
| Mn1—N1i | 2.2407 (14) | C1—C2 | 1.356 (2) |
| Mn1—O3 | 2.2521 (14) | C1—H1 | 0.9300 |
| Mn1—O3i | 2.2521 (14) | C2—H2 | 0.9300 |
| N1—C3 | 1.330 (2) | C3—C4 | 1.444 (2) |
| N1—C1 | 1.372 (2) | C5—C6 | 1.350 (3) |
| N2—C3 | 1.338 (2) | C5—H5 | 0.9300 |
| N2—C2 | 1.364 (2) | C6—H6 | 0.9300 |
| N2—H2A | 0.8600 | C7—C8 | 1.510 (2) |
| N3—C4 | 1.324 (2) | C8—C10ii | 1.383 (3) |
| N3—C6 | 1.370 (2) | C8—C9 | 1.386 (3) |
| N4—C4 | 1.341 (2) | C9—C10 | 1.386 (2) |
| N4—C5 | 1.358 (2) | C9—H9 | 0.9300 |
| N4—H4 | 0.8600 | C10—C8ii | 1.383 (3) |
| O1—C7 | 1.252 (2) | C10—H10 | 0.9300 |
| N3—Mn1—N3i | 180.0 | C2—C1—N1 | 109.46 (15) |
| N3—Mn1—N1 | 77.77 (5) | C2—C1—H1 | 125.3 |
| N3i—Mn1—N1 | 102.23 (5) | N1—C1—H1 | 125.3 |
| N3—Mn1—N1i | 102.23 (5) | C1—C2—N2 | 106.73 (15) |
| N3i—Mn1—N1i | 77.77 (5) | C1—C2—H2 | 126.6 |
| N1—Mn1—N1i | 180.00 (6) | N2—C2—H2 | 126.6 |
| N3—Mn1—O3 | 89.42 (6) | N1—C3—N2 | 111.53 (15) |
| N3i—Mn1—O3 | 90.58 (6) | N1—C3—C4 | 120.62 (15) |
| N1—Mn1—O3 | 91.08 (5) | N2—C3—C4 | 127.86 (15) |
| N1i—Mn1—O3 | 88.92 (5) | N3—C4—N4 | 111.31 (15) |
| N3—Mn1—O3i | 90.58 (6) | N3—C4—C3 | 120.73 (15) |
| N3i—Mn1—O3i | 89.42 (6) | N4—C4—C3 | 127.95 (15) |
| N1—Mn1—O3i | 88.92 (5) | C6—C5—N4 | 106.95 (16) |
| N1i—Mn1—O3i | 91.08 (5) | C6—C5—H5 | 126.5 |
| O3—Mn1—O3i | 180.00 (5) | N4—C5—H5 | 126.5 |
| C3—N1—C1 | 105.24 (14) | C5—C6—N3 | 109.40 (16) |
| C3—N1—Mn1 | 109.91 (11) | C5—C6—H6 | 125.3 |
| C1—N1—Mn1 | 144.74 (11) | N3—C6—H6 | 125.3 |
| C3—N2—C2 | 107.05 (14) | O2—C7—O1 | 124.18 (17) |
| C3—N2—H2A | 126.5 | O2—C7—C8 | 118.01 (17) |
| C2—N2—H2A | 126.5 | O1—C7—C8 | 117.81 (16) |
| C4—N3—C6 | 105.36 (14) | C10ii—C8—C9 | 119.03 (16) |
| C4—N3—Mn1 | 110.79 (11) | C10ii—C8—C7 | 121.06 (16) |
| C6—N3—Mn1 | 143.79 (12) | C9—C8—C7 | 119.91 (16) |
| C4—N4—C5 | 106.97 (15) | C8—C9—C10 | 120.33 (17) |
| C4—N4—H4 | 126.5 | C8—C9—H9 | 119.8 |
| C5—N4—H4 | 126.5 | C10—C9—H9 | 119.8 |
| Mn1—O3—H3A | 117.7 (18) | C8ii—C10—C9 | 120.64 (17) |
| Mn1—O3—H3B | 129 (2) | C8ii—C10—H10 | 119.7 |
| H3A—O3—H3B | 108 (3) | C9—C10—H10 | 119.7 |
| N3—Mn1—N1—C3 | −3.35 (11) | C1—N1—C3—C4 | 179.99 (15) |
| N3i—Mn1—N1—C3 | 176.65 (11) | Mn1—N1—C3—C4 | 2.77 (19) |
| N1i—Mn1—N1—C3 | 118.74 (12) | C2—N2—C3—N1 | 0.25 (19) |
| O3—Mn1—N1—C3 | −92.52 (11) | C2—N2—C3—C4 | −179.90 (17) |
| O3i—Mn1—N1—C3 | 87.48 (11) | C6—N3—C4—N4 | −0.3 (2) |
| N3—Mn1—N1—C1 | −178.7 (2) | Mn1—N3—C4—N4 | 177.63 (11) |
| N3i—Mn1—N1—C1 | 1.3 (2) | C6—N3—C4—C3 | 178.54 (16) |
| N1i—Mn1—N1—C1 | −56.59 (18) | Mn1—N3—C4—C3 | −3.5 (2) |
| O3—Mn1—N1—C1 | 92.1 (2) | C5—N4—C4—N3 | 0.4 (2) |
| O3i—Mn1—N1—C1 | −87.9 (2) | C5—N4—C4—C3 | −178.38 (18) |
| N3i—Mn1—N3—C4 | −180 (81) | N1—C3—C4—N3 | 0.5 (3) |
| N1—Mn1—N3—C4 | 3.61 (11) | N2—C3—C4—N3 | −179.33 (16) |
| N1i—Mn1—N3—C4 | −176.39 (11) | N1—C3—C4—N4 | 179.15 (16) |
| O3—Mn1—N3—C4 | 94.84 (12) | N2—C3—C4—N4 | −0.7 (3) |
| O3i—Mn1—N3—C4 | −85.16 (12) | C4—N4—C5—C6 | −0.3 (2) |
| N3i—Mn1—N3—C6 | −3 (81) | N4—C5—C6—N3 | 0.1 (2) |
| N1—Mn1—N3—C6 | −179.8 (2) | C4—N3—C6—C5 | 0.1 (2) |
| N1i—Mn1—N3—C6 | 0.2 (2) | Mn1—N3—C6—C5 | −176.60 (16) |
| O3—Mn1—N3—C6 | −88.5 (2) | O2—C7—C8—C10ii | −30.4 (3) |
| O3i—Mn1—N3—C6 | 91.5 (2) | O1—C7—C8—C10ii | 150.38 (18) |
| C3—N1—C1—C2 | 0.00 (19) | O2—C7—C8—C9 | 150.21 (18) |
| Mn1—N1—C1—C2 | 175.45 (14) | O1—C7—C8—C9 | −29.0 (3) |
| N1—C1—C2—N2 | 0.1 (2) | C10ii—C8—C9—C10 | −0.3 (3) |
| C3—N2—C2—C1 | −0.24 (19) | C7—C8—C9—C10 | 179.15 (17) |
| C1—N1—C3—N2 | −0.15 (18) | C8—C9—C10—C8ii | 0.3 (3) |
| Mn1—N1—C3—N2 | −177.37 (11) |
| H··· | ||||
| O3—H3 | 0.80 (3) | 2.09 (3) | 2.850 (2) | 159 (3) |
| O3—H3 | 0.87 (3) | 1.85 (3) | 2.711 (2) | 170 (3) |
| N4—H4···O1 | 0.86 | 1.87 | 2.7101 (19) | 165 |
| N2—H2 | 0.86 | 1.89 | 2.7482 (19) | 173 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3 | 0.80 (3) | 2.09 (3) | 2.850 (2) | 159 (3) |
| O3—H3 | 0.87 (3) | 1.85 (3) | 2.711 (2) | 170 (3) |
| N4—H4⋯O1 | 0.86 | 1.87 | 2.7101 (19) | 165 |
| N2—H2 | 0.86 | 1.89 | 2.7482 (19) | 173 |
Symmetry codes: (i) ; (ii) .