Literature DB >> 22719361

Bis(2-amino-1,3-benzothia-zol-3-ium) bis-(7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato)cadmate hexa-hydrate.

Fan Zhang, Qiu-Yue Lin, Ling-Ling Chen, Jun-Gang Ke.   

Abstract

In the structure of the title complex, (C(7)H(7)N(2)S)(2)[Cd(C(8)H(8)O(5))(2)]·6H(2)O, the Cd(II) atom is located on an inversion center and is O,O',O''-chelated by two symmetry-related 7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ate ligands in a distorted octa-hedral geometry. The 2-amino-benzothia-zolium cation links with the Cd complex anion via N-H⋯O hydrogen bonding. Extensive O-H⋯O and N-H⋯O hydrogen bonds involving lattice water mol-ecules occur in the crystal structure.

Entities:  

Year:  2012        PMID: 22719361      PMCID: PMC3379140          DOI: 10.1107/S1600536812022593

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of 7-oxabicyclo­[2,2,1]heptane-2,3-dicarb­oxy­lic anhydride (norcantharidin), see: Yin et al. (2005 ▶). For a manganese(II) analogue, see: Wang et al. (2010a ▶), for a cobalt(II) analogue, see: Wang et al. (2010b ▶), for a nickel(II) analogue, see: Wang et al. (2012 ▶) and for a zinc(II) analogue, see: Zhang et al. (2012 ▶).

Experimental

Crystal data

(C7H7N2S)2[Cd(C8H8O5)2]·6H2O M = 891.23 Triclinic, a = 6.6990 (8) Å b = 10.3103 (10) Å c = 13.0979 (13) Å α = 89.039 (7)° β = 89.004 (7)° γ = 82.062 (7)° V = 895.76 (16) Å3 Z = 1 Mo Kα radiation μ = 0.81 mm−1 T = 296 K 0.12 × 0.08 × 0.06 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.927, T max = 0.957 12401 measured reflections 3138 independent reflections 2782 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.070 S = 1.07 3138 reflections 250 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812022593/vn2038sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812022593/vn2038Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C7H7N2S)2[Cd(C8H8O5)2]·6H2OZ = 1
Mr = 891.23F(000) = 458
Triclinic, P1Dx = 1.652 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.6990 (8) ÅCell parameters from 3684 reflections
b = 10.3103 (10) Åθ = 1.6–25.0°
c = 13.0979 (13) ŵ = 0.81 mm1
α = 89.039 (7)°T = 296 K
β = 89.004 (7)°Block, colourless
γ = 82.062 (7)°0.12 × 0.08 × 0.06 mm
V = 895.76 (16) Å3
Bruker APEXII area-detector diffractometer3138 independent reflections
Radiation source: fine-focus sealed tube2782 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.037
ω scansθmax = 25.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.927, Tmax = 0.957k = −12→12
12401 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.070H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0329P)2 + 0.3371P] where P = (Fo2 + 2Fc2)/3
3138 reflections(Δ/σ)max = 0.001
250 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.50000.00000.00000.02740 (11)
S10.67420 (11)0.26053 (7)0.52095 (5)0.03489 (19)
N10.7260 (3)0.0299 (2)0.59906 (16)0.0269 (5)
H1A0.7363−0.03340.64310.032*
N20.6614 (4)0.1938 (2)0.71990 (17)0.0357 (6)
H2A0.67000.13740.76930.043*
H2B0.63610.27610.73250.043*
O10.6235 (3)0.16660 (17)0.06762 (15)0.0342 (5)
O1W0.4780 (4)0.5348 (2)0.28331 (18)0.0480 (6)
H1WA0.51860.48900.23170.072*
H1WB0.38710.49860.31410.072*
O20.6139 (3)0.35871 (19)0.14105 (15)0.0394 (5)
O2W0.1911 (4)0.4499 (3)0.59727 (19)0.0624 (7)
H2WA0.30360.45880.62340.094*
H2WB0.20540.43350.53400.094*
O30.2779 (3)0.01702 (17)0.13613 (13)0.0333 (5)
O3W0.1839 (4)0.3984 (2)0.37312 (18)0.0552 (6)
H3WA0.07240.44900.37130.083*
H3WB0.18800.34050.32740.083*
O40.2247 (3)0.16445 (18)0.25914 (14)0.0342 (5)
O50.2679 (3)0.16742 (17)−0.07122 (13)0.0297 (4)
C60.1262 (4)0.3800 (3)−0.1106 (2)0.0329 (6)
H6A0.13380.3824−0.18460.039*
H6B0.10480.4688−0.08540.039*
C5−0.0403 (4)0.3011 (3)−0.0718 (2)0.0348 (7)
H5A−0.13790.3537−0.02860.042*
H5B−0.10950.2677−0.12800.042*
C10.3151 (4)0.3013 (2)−0.06518 (19)0.0268 (6)
H1B0.44000.3149−0.10130.032*
C40.0804 (4)0.1902 (3)−0.0110 (2)0.0290 (6)
H4A0.01230.1123−0.00290.035*
C20.3217 (4)0.3217 (2)0.05110 (19)0.0236 (6)
H2C0.28070.41450.06590.028*
C30.1510 (4)0.2401 (2)0.08993 (19)0.0240 (6)
H3A0.04060.29980.12060.029*
C70.5339 (4)0.2791 (3)0.0913 (2)0.0264 (6)
C80.2237 (4)0.1329 (3)0.1673 (2)0.0266 (6)
C90.7242 (4)0.1270 (3)0.4387 (2)0.0300 (6)
C100.7405 (4)0.1277 (3)0.3330 (2)0.0395 (7)
H10A0.72400.20580.29560.047*
C110.7818 (5)0.0087 (3)0.2852 (2)0.0451 (8)
H11A0.79380.00650.21440.054*
C120.8059 (4)−0.1076 (3)0.3408 (2)0.0408 (7)
H12A0.8337−0.18650.30650.049*
C130.7897 (4)−0.1093 (3)0.4460 (2)0.0327 (6)
H13A0.8053−0.18760.48310.039*
C140.7494 (4)0.0096 (3)0.49408 (19)0.0257 (6)
C150.6867 (4)0.1544 (3)0.6253 (2)0.0269 (6)
U11U22U33U12U13U23
Cd10.03353 (18)0.01935 (16)0.02779 (17)0.00173 (11)0.00364 (12)−0.00422 (11)
S10.0462 (5)0.0268 (4)0.0307 (4)−0.0022 (3)−0.0007 (3)0.0056 (3)
N10.0304 (13)0.0259 (12)0.0248 (12)−0.0054 (9)−0.0008 (9)0.0044 (9)
N20.0538 (16)0.0271 (13)0.0257 (12)−0.0046 (11)0.0014 (11)−0.0006 (10)
O10.0308 (11)0.0251 (10)0.0456 (12)0.0010 (8)−0.0048 (9)−0.0076 (9)
O1W0.0570 (16)0.0340 (12)0.0522 (14)−0.0043 (10)0.0143 (11)−0.0108 (10)
O20.0370 (12)0.0364 (12)0.0467 (12)−0.0089 (9)−0.0047 (9)−0.0161 (10)
O2W0.0599 (16)0.0736 (18)0.0512 (15)0.0011 (14)−0.0085 (12)−0.0075 (14)
O30.0461 (12)0.0223 (10)0.0289 (10)0.0031 (8)0.0099 (9)0.0026 (8)
O3W0.0620 (16)0.0484 (15)0.0533 (15)−0.0003 (12)0.0115 (12)−0.0161 (12)
O40.0501 (13)0.0284 (10)0.0235 (10)−0.0034 (9)0.0028 (9)0.0002 (8)
O50.0389 (11)0.0233 (10)0.0255 (10)0.0012 (8)−0.0019 (8)−0.0045 (8)
C60.0436 (18)0.0274 (15)0.0262 (14)0.0003 (12)−0.0045 (12)0.0035 (12)
C50.0343 (17)0.0332 (16)0.0357 (16)0.0002 (12)−0.0086 (13)−0.0007 (13)
C10.0333 (15)0.0227 (14)0.0240 (14)−0.0036 (11)0.0058 (11)0.0021 (11)
C40.0282 (15)0.0226 (14)0.0364 (16)−0.0041 (11)−0.0021 (12)−0.0001 (12)
C20.0302 (15)0.0151 (13)0.0250 (13)−0.0004 (10)0.0003 (11)−0.0035 (10)
C30.0250 (14)0.0203 (13)0.0254 (13)0.0009 (10)0.0052 (11)−0.0013 (11)
C70.0310 (15)0.0238 (15)0.0251 (14)−0.0066 (12)0.0041 (11)−0.0012 (11)
C80.0243 (14)0.0258 (15)0.0295 (15)−0.0040 (11)0.0086 (11)0.0030 (12)
C90.0268 (15)0.0329 (16)0.0302 (15)−0.0037 (12)−0.0033 (11)0.0037 (12)
C100.0404 (18)0.052 (2)0.0262 (15)−0.0056 (14)−0.0030 (13)0.0081 (14)
C110.0399 (19)0.072 (2)0.0240 (15)−0.0108 (16)0.0002 (13)−0.0062 (16)
C120.0357 (17)0.0481 (19)0.0387 (18)−0.0045 (14)0.0006 (13)−0.0152 (15)
C130.0289 (16)0.0330 (16)0.0367 (16)−0.0048 (12)−0.0021 (12)−0.0043 (13)
C140.0188 (14)0.0331 (15)0.0253 (14)−0.0034 (11)−0.0022 (10)−0.0004 (12)
C150.0273 (15)0.0267 (15)0.0270 (14)−0.0046 (11)−0.0025 (11)0.0020 (12)
Cd1—O1i2.2108 (18)C6—C11.530 (4)
Cd1—O12.2108 (18)C6—C51.543 (4)
Cd1—O32.2954 (18)C6—H6A0.9700
Cd1—O3i2.2954 (18)C6—H6B0.9700
Cd1—O5i2.3499 (17)C5—C41.527 (4)
Cd1—O52.3499 (17)C5—H5A0.9700
S1—C151.733 (3)C5—H5B0.9700
S1—C91.754 (3)C1—C21.543 (3)
N1—C151.324 (3)C1—H1B0.9800
N1—C141.397 (3)C4—C31.532 (4)
N1—H1A0.8600C4—H4A0.9800
N2—C151.311 (3)C2—C71.528 (4)
N2—H2A0.8600C2—C31.583 (3)
N2—H2B0.8600C2—H2C0.9800
O1—C71.271 (3)C3—C81.522 (3)
O1W—H1WA0.8501C3—H3A0.9800
O1W—H1WB0.8500C9—C101.388 (4)
O2—C71.240 (3)C9—C141.391 (4)
O2W—H2WA0.8499C10—C111.378 (4)
O2W—H2WB0.8500C10—H10A0.9300
O3—C81.271 (3)C11—C121.384 (4)
O3W—H3WA0.8500C11—H11A0.9300
O3W—H3WB0.8500C12—C131.381 (4)
O4—C81.252 (3)C12—H12A0.9300
O5—C11.461 (3)C13—C141.378 (4)
O5—C41.464 (3)C13—H13A0.9300
O1i—Cd1—O1180.00 (10)C2—C1—H1B113.6
O1i—Cd1—O394.23 (7)O5—C4—C5101.6 (2)
O1—Cd1—O385.77 (7)O5—C4—C3102.5 (2)
O1i—Cd1—O3i85.77 (7)C5—C4—C3110.9 (2)
O1—Cd1—O3i94.23 (7)O5—C4—H4A113.6
O3—Cd1—O3i180.00 (6)C5—C4—H4A113.6
O1i—Cd1—O5i82.90 (6)C3—C4—H4A113.6
O1—Cd1—O5i97.10 (6)C7—C2—C1110.9 (2)
O3—Cd1—O5i96.23 (6)C7—C2—C3116.9 (2)
O3i—Cd1—O5i83.77 (6)C1—C2—C3100.8 (2)
O1i—Cd1—O597.10 (6)C7—C2—H2C109.3
O1—Cd1—O582.90 (6)C1—C2—H2C109.3
O3—Cd1—O583.77 (6)C3—C2—H2C109.3
O3i—Cd1—O596.23 (6)C8—C3—C4114.5 (2)
O5i—Cd1—O5180.00 (8)C8—C3—C2113.7 (2)
C15—S1—C990.15 (13)C4—C3—C2101.3 (2)
C15—N1—C14114.6 (2)C8—C3—H3A109.0
C15—N1—H1A122.7C4—C3—H3A109.0
C14—N1—H1A122.7C2—C3—H3A109.0
C15—N2—H2A120.0O2—C7—O1123.2 (3)
C15—N2—H2B120.0O2—C7—C2118.2 (2)
H2A—N2—H2B120.0O1—C7—C2118.5 (2)
C7—O1—Cd1129.36 (17)O4—C8—O3123.6 (2)
H1WA—O1W—H1WB108.2O4—C8—C3117.4 (2)
H2WA—O2W—H2WB110.7O3—C8—C3119.0 (2)
C8—O3—Cd1115.11 (15)C10—C9—C14120.7 (3)
H3WA—O3W—H3WB110.4C10—C9—S1128.6 (2)
C1—O5—C495.87 (18)C14—C9—S1110.64 (19)
C1—O5—Cd1117.20 (15)C11—C10—C9117.7 (3)
C4—O5—Cd1112.02 (14)C11—C10—H10A121.1
C1—C6—C5101.8 (2)C9—C10—H10A121.1
C1—C6—H6A111.4C10—C11—C12121.2 (3)
C5—C6—H6A111.4C10—C11—H11A119.4
C1—C6—H6B111.4C12—C11—H11A119.4
C5—C6—H6B111.4C13—C12—C11121.5 (3)
H6A—C6—H6B109.3C13—C12—H12A119.3
C4—C5—C6102.0 (2)C11—C12—H12A119.3
C4—C5—H5A111.4C14—C13—C12117.5 (3)
C6—C5—H5A111.4C14—C13—H13A121.2
C4—C5—H5B111.4C12—C13—H13A121.2
C6—C5—H5B111.4C13—C14—C9121.4 (2)
H5A—C5—H5B109.2C13—C14—N1126.8 (2)
O5—C1—C6101.6 (2)C9—C14—N1111.9 (2)
O5—C1—C2102.46 (18)N2—C15—N1124.0 (2)
C6—C1—C2110.8 (2)N2—C15—S1123.3 (2)
O5—C1—H1B113.6N1—C15—S1112.69 (19)
C6—C1—H1B113.6
O3—Cd1—O1—C7−55.7 (2)C5—C4—C3—C2−72.4 (2)
O3i—Cd1—O1—C7124.3 (2)C7—C2—C3—C82.8 (3)
O5i—Cd1—O1—C7−151.4 (2)C1—C2—C3—C8123.0 (2)
O5—Cd1—O1—C728.6 (2)C7—C2—C3—C4−120.5 (2)
O1i—Cd1—O3—C8−146.03 (18)C1—C2—C3—C4−0.3 (2)
O1—Cd1—O3—C833.97 (18)Cd1—O1—C7—O2170.25 (19)
O5i—Cd1—O3—C8130.68 (18)Cd1—O1—C7—C2−13.6 (3)
O5—Cd1—O3—C8−49.32 (18)C1—C2—C7—O2126.0 (2)
O1i—Cd1—O5—C1−167.19 (16)C3—C2—C7—O2−119.3 (3)
O1—Cd1—O5—C112.81 (16)C1—C2—C7—O1−50.4 (3)
O3—Cd1—O5—C199.31 (16)C3—C2—C7—O164.3 (3)
O3i—Cd1—O5—C1−80.69 (16)Cd1—O3—C8—O4−131.4 (2)
O1i—Cd1—O5—C483.43 (16)Cd1—O3—C8—C349.3 (3)
O1—Cd1—O5—C4−96.57 (16)C4—C3—C8—O4−158.7 (2)
O3—Cd1—O5—C4−10.07 (15)C2—C3—C8—O485.5 (3)
O3i—Cd1—O5—C4169.93 (15)C4—C3—C8—O320.6 (3)
C1—C6—C5—C4−0.2 (3)C2—C3—C8—O3−95.1 (3)
C4—O5—C1—C6−57.3 (2)C15—S1—C9—C10179.8 (3)
Cd1—O5—C1—C6−175.78 (14)C15—S1—C9—C14−0.5 (2)
C4—O5—C1—C257.3 (2)C14—C9—C10—C110.1 (4)
Cd1—O5—C1—C2−61.1 (2)S1—C9—C10—C11179.8 (2)
C5—C6—C1—O535.4 (2)C9—C10—C11—C120.2 (5)
C5—C6—C1—C2−72.9 (3)C10—C11—C12—C130.0 (5)
C1—O5—C4—C557.2 (2)C11—C12—C13—C14−0.3 (4)
Cd1—O5—C4—C5179.65 (15)C12—C13—C14—C90.6 (4)
C1—O5—C4—C3−57.6 (2)C12—C13—C14—N1179.6 (2)
Cd1—O5—C4—C364.89 (19)C10—C9—C14—C13−0.5 (4)
C6—C5—C4—O5−34.9 (3)S1—C9—C14—C13179.8 (2)
C6—C5—C4—C373.4 (3)C10—C9—C14—N1−179.6 (2)
O5—C1—C2—C789.5 (2)S1—C9—C14—N10.7 (3)
C6—C1—C2—C7−162.8 (2)C15—N1—C14—C13−179.6 (3)
O5—C1—C2—C3−34.9 (2)C15—N1—C14—C9−0.5 (3)
C6—C1—C2—C372.8 (2)C14—N1—C15—N2−179.4 (2)
O5—C4—C3—C8−87.4 (2)C14—N1—C15—S10.1 (3)
C5—C4—C3—C8164.8 (2)C9—S1—C15—N2179.7 (2)
O5—C4—C3—C235.3 (2)C9—S1—C15—N10.2 (2)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O20.851.852.682 (3)167
O2W—H2WB···O3W0.852.152.995 (3)170
O1W—H1WB···O3W0.851.962.806 (3)173
O3W—H3WB···O40.852.022.837 (3)161
N1—H1A···O4ii0.861.842.700 (3)176
N2—H2A···O3ii0.862.002.845 (3)169
N2—H2B···O1Wiii0.862.002.824 (3)160
O2W—H2WA···O1Wiii0.851.932.758 (4)164
O3W—H3WA···O2Wiv0.851.962.794 (3)166
Table 1

Selected bond lengths (Å)

Cd1—O12.2108 (18)
Cd1—O32.2954 (18)
Cd1—O52.3499 (17)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O20.851.852.682 (3)167
O2W—H2WB⋯O3W0.852.152.995 (3)170
O1W—H1WB⋯O3W0.851.962.806 (3)173
O3W—H3WB⋯O40.852.022.837 (3)161
N1—H1A⋯O4i0.861.842.700 (3)176
N2—H2A⋯O3i0.862.002.845 (3)169
N2—H2B⋯O1Wii0.862.002.824 (3)160
O2W—H2WA⋯O1Wii0.851.932.758 (4)164
O3W—H3WA⋯O2Wiii0.851.962.794 (3)166

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis(2-amino-benzothia-zol-3-ium) bis-(7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato-κ(3)O(2),O(3),O(7))nickelate(II) hexa-hydrate.

Authors:  Gui-Xian Wang; Qi-Wei Zhang; Fan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-28

3.  Bis(2-amino-3H-benzothia-zolium) bis-(7-oxabicyclo-[2.2.1]heptane-2,3-di-carbox-yl-ato)manganate(II) hexa-hydrate.

Authors:  Na Wang; Yi-Hang Wen; Qiu-Yue Lin; Jie Feng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-09

4.  Bis(2-amino-3H-benzothia-zolium) bis-(7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato)cobaltate(II) hexa-hydrate.

Authors:  Na Wang; Qiu-Yue Lin; Jie Feng; Shi-Kun Li; Jun-Jun Zhao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-09

5.  Bis(2-amino-benzothia-zol-3-ium) bis-(7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato-κ(3)O(2),O(3),O(7))zincate hexa-hydrate.

Authors:  Fan Zhang; Tian-Xi Lv; Jie Feng; Qiu-Yue Lin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-28
  5 in total

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