Literature DB >> 22719360

Tetra-aqua-bis-(N,N-dimethyl-formamide-κO)zinc(II) bis-[(2-{3-[2-(carboxyl-ato-meth-oxy-κ(2)O,O')phen-yl]pyrazol-1-yl-κN(2)}acetato-κO)chloridozincate(II)].

Jie Yang1, Lei Shen, Cheng Ji, Xiao-Feng Shen, Gao-Weng Yang.   

Abstract

The asymmetric unit of the title compound, [Zn(<span class="Chemical">C(3)H(7)NO)(2)(H(2)O)(4)][Zn(C(13)<class="Chemical">span class="Species">H(10)N(2)O(5))Cl](2), is composed of a single anion and half a cation. The Zn(II) atom in the monoanion has a distorted triganol-pyramidal geometry, being coordinated by three O atoms and one N atom from one 2-{3-[2-(carboxyl-ato-meth-oxy)phen-yl]pyrazol-1-yl}acetate ligand and one Cl atom. In the dication, the Zn(II) atom is located on an inversion center and is coordinated by six O atoms in a slightly distorted octa-hedral geometry. In the crystal, the ions are linked by O-H⋯O hydrogen bonds, forming a two-dimensional network lying parallel to the ab plane. There are also C-H⋯O and C-H⋯Cl inter-actions present, which lead to the formation of a three-dimensional structure.

Entities:  

Year:  2012        PMID: 22719360      PMCID: PMC3379139          DOI: 10.1107/S1600536812023045

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For potential applications of <span class="Chemical">pyrazole derivatives in advanced materials, see: Su et al. (2000 ▶); Tong et al. (2003 ▶). For the τ-descriptor of <class="Chemical">span class="Chemical">penta-coordinated metal atoms, see: Addison et al. (1984 ▶).

Experimental

Crystal data

[Zn(C3H7NO)2(H2O)4][Zn(C13<span class="Species">H10N2O5)Cl]2 M = 1033.79 Triclinic, a = 8.0040 (16) Å b = 8.7276 (17) Å c = 15.782 (3) Å α = 90.06 (3)° β = 101.22 (3)° γ = 107.95 (3)° V = 1026.6 (3) Å3 Z = 1 Mo Kα radiation μ = 1.95 mm−1 T = 291 K 0.25 × 0.22 × 0.21 mm

Data collection

Rigaku <span class="Chemical">Mercury diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.642, T max = 0.686 10740 measured reflections 4704 independent reflections 3632 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.168 S = 1.07 4704 reflections 265 parameters 23 restraints H-atom parameters constrained Δρmax = 1.99 e Å−3 Δρmin = −0.73 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and CrystalStructure (Rigaku/MSC, 2004 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812023045/su2397sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023045/su2397Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C3H7NO)2(H2O)4][Zn(C13H10N2O5)Cl]2Z = 1
Mr = 1033.79F(000) = 528
Triclinic, P1Dx = 1.672 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.0040 (16) ÅCell parameters from 10740 reflections
b = 8.7276 (17) Åθ = 3.1–27.5°
c = 15.782 (3) ŵ = 1.95 mm1
α = 90.06 (3)°T = 291 K
β = 101.22 (3)°Block, colourless
γ = 107.95 (3)°0.25 × 0.22 × 0.21 mm
V = 1026.6 (3) Å3
Rigaku Mercury diffractometer4704 independent reflections
Radiation source: fine-focus sealed tube3632 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
ω scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −10→10
Tmin = 0.642, Tmax = 0.686k = −11→11
10740 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.168H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
4704 reflections(Δ/σ)max < 0.001
265 parametersΔρmax = 1.99 e Å3
23 restraintsΔρmin = −0.73 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn20.28061 (6)0.71444 (5)0.29770 (3)0.0271 (2)
Cl10.04523 (14)0.78125 (14)0.32248 (8)0.0415 (4)
O10.2909 (4)0.5528 (3)0.41252 (18)0.0343 (9)
O20.3455 (4)0.8648 (4)0.20287 (18)0.0371 (9)
O30.5276 (4)1.0071 (5)0.1224 (2)0.0509 (13)
O40.2013 (4)0.4924 (3)0.24461 (19)0.0365 (9)
O50.0503 (4)0.2338 (4)0.2575 (2)0.0459 (11)
N10.5313 (4)0.8109 (4)0.3703 (2)0.0283 (10)
N20.6622 (4)0.9126 (4)0.3366 (2)0.0301 (10)
C10.7964 (5)1.0017 (5)0.3987 (3)0.0361 (12)
C20.7530 (6)0.9617 (5)0.4766 (3)0.0350 (12)
C30.5845 (5)0.8392 (4)0.4578 (2)0.0249 (11)
C40.4840 (5)0.7501 (5)0.5203 (3)0.0277 (11)
C50.5382 (6)0.8039 (5)0.6081 (3)0.0336 (12)
C60.4588 (7)0.7199 (6)0.6715 (3)0.0413 (16)
C70.3213 (7)0.5759 (6)0.6478 (3)0.0432 (16)
C80.2595 (6)0.5178 (5)0.5621 (3)0.0348 (12)
C90.3411 (5)0.6049 (5)0.4985 (2)0.0273 (11)
C100.6618 (6)0.9009 (6)0.2440 (3)0.0398 (14)
C110.4999 (5)0.9281 (5)0.1858 (3)0.0339 (12)
C120.1551 (5)0.4021 (4)0.3845 (3)0.0281 (11)
C130.1363 (6)0.3744 (5)0.2887 (3)0.0348 (12)
Zn11.000000.000000.000000.0325 (2)
O61.0708 (8)0.2476 (5)−0.0070 (4)0.094 (2)
O70.7437 (5)−0.0088 (7)0.0101 (2)0.0810 (19)
O81.0867 (5)0.0342 (4)0.13520 (19)0.0494 (11)
N31.2254 (6)0.4929 (5)−0.0348 (3)0.0660 (18)
C141.1206 (6)0.3353 (5)−0.0562 (3)0.101 (3)
C151.3142 (14)0.5932 (12)0.0394 (5)0.117 (4)
C161.2371 (14)0.5717 (13)−0.1167 (5)0.127 (5)
H1A0.901301.077700.390000.0430*
H2A0.820101.005700.530900.0420*
H5A0.631300.900100.624200.0400*
H6A0.497000.759200.729100.0500*
H7A0.269400.517000.690300.0520*
H8A0.165100.422300.546900.0420*
H10A0.666200.794700.228700.0480*
H10B0.769600.979800.233000.0480*
H12A0.042100.404200.397300.0340*
H12B0.188200.315500.414600.0340*
H7B0.66940−0.02460−0.046900.1210*
H7C0.747400.090900.037300.1210*
H8B1.211200.041400.150100.0740*
H8C1.071900.132500.154700.0740*
H14A1.089400.28160−0.112900.1510*
H15A1.302500.531700.089600.1750*
H15B1.262600.678300.042300.1750*
H15C1.438900.638800.037600.1750*
H16A1.172800.49420−0.164300.1900*
H16B1.360700.61470−0.121000.1900*
H16C1.185500.65770−0.118100.1900*
U11U22U33U12U13U23
Zn20.0249 (3)0.0290 (3)0.0234 (3)0.0051 (2)0.0009 (2)0.0017 (2)
Cl10.0314 (5)0.0477 (7)0.0473 (7)0.0147 (5)0.0092 (5)−0.0004 (5)
O10.0401 (16)0.0295 (15)0.0255 (14)0.0018 (12)0.0031 (12)0.0017 (12)
O20.0267 (14)0.0531 (19)0.0271 (15)0.0065 (13)0.0048 (12)0.0146 (14)
O30.0330 (17)0.083 (3)0.0349 (18)0.0130 (17)0.0115 (14)0.0271 (17)
O40.0455 (17)0.0321 (16)0.0290 (15)0.0076 (13)0.0084 (13)−0.0017 (12)
O50.0502 (19)0.0320 (17)0.0456 (19)−0.0007 (14)0.0089 (15)−0.0144 (14)
N10.0214 (15)0.0339 (18)0.0270 (17)0.0061 (14)0.0030 (13)0.0041 (14)
N20.0237 (16)0.0361 (19)0.0286 (18)0.0079 (14)0.0033 (14)0.0075 (14)
C10.025 (2)0.033 (2)0.040 (2)−0.0009 (17)−0.0014 (18)0.0049 (19)
C20.029 (2)0.034 (2)0.034 (2)0.0038 (17)−0.0023 (17)−0.0019 (18)
C30.0261 (18)0.0230 (18)0.0244 (19)0.0099 (15)−0.0013 (15)0.0002 (15)
C40.0262 (19)0.029 (2)0.028 (2)0.0126 (16)−0.0004 (16)0.0002 (16)
C50.039 (2)0.036 (2)0.024 (2)0.0140 (18)−0.0012 (17)−0.0048 (17)
C60.046 (3)0.053 (3)0.026 (2)0.019 (2)0.0041 (19)−0.004 (2)
C70.046 (3)0.058 (3)0.030 (2)0.017 (2)0.017 (2)0.013 (2)
C80.035 (2)0.037 (2)0.031 (2)0.0090 (19)0.0075 (18)0.0018 (18)
C90.029 (2)0.032 (2)0.0230 (19)0.0133 (17)0.0040 (16)0.0000 (16)
C100.029 (2)0.056 (3)0.035 (2)0.012 (2)0.0103 (18)0.013 (2)
C110.029 (2)0.045 (2)0.026 (2)0.0102 (19)0.0038 (17)0.0036 (18)
C120.0272 (19)0.0220 (19)0.032 (2)0.0034 (15)0.0057 (16)0.0013 (16)
C130.031 (2)0.034 (2)0.040 (2)0.0138 (18)0.0027 (18)−0.0043 (19)
Zn10.0342 (4)0.0339 (4)0.0301 (4)0.0116 (3)0.0071 (3)0.0034 (3)
O60.133 (4)0.050 (3)0.098 (4)0.022 (3)0.030 (3)0.031 (2)
O70.050 (2)0.177 (5)0.0319 (19)0.058 (3)0.0093 (17)0.007 (2)
O80.070 (2)0.061 (2)0.0268 (16)0.0414 (19)−0.0013 (15)−0.0040 (15)
N30.073 (3)0.039 (2)0.090 (4)0.014 (2)0.032 (3)0.002 (2)
C140.116 (5)0.069 (4)0.113 (5)0.017 (4)0.031 (4)0.004 (4)
C150.168 (8)0.130 (7)0.066 (5)0.082 (6)0.001 (5)−0.018 (5)
C160.157 (9)0.163 (9)0.052 (5)0.049 (7)0.005 (5)0.022 (5)
Zn2—Cl12.2373 (14)C1—C21.359 (7)
Zn2—O12.302 (3)C2—C31.416 (6)
Zn2—O22.029 (3)C3—C41.466 (6)
Zn2—O41.973 (3)C4—C51.403 (7)
Zn2—N12.027 (3)C4—C91.409 (6)
Zn1—O62.067 (4)C5—C61.380 (7)
Zn1—O72.066 (4)C6—C71.385 (7)
Zn1—O82.102 (3)C7—C81.384 (7)
Zn1—O6i2.067 (4)C8—C91.401 (6)
Zn1—O7i2.066 (4)C10—C111.519 (7)
Zn1—O8i2.102 (3)C12—C131.502 (7)
O1—C91.372 (4)C1—H1A0.9300
O1—C121.427 (5)C2—H2A0.9300
O2—C111.271 (5)C5—H5A0.9300
O3—C111.233 (6)C6—H6A0.9300
O4—C131.276 (5)C7—H7A0.9300
O5—C131.252 (5)C8—H8A0.9300
O6—C141.132 (7)C10—H10B0.9700
O7—H7B0.9600C10—H10A0.9700
O7—H7C0.9600C12—H12B0.9700
O8—H8C0.9600C12—H12A0.9700
O8—H8B0.9600C14—H14A0.9600
N1—N21.347 (5)C15—H15A0.9600
N1—C31.362 (4)C15—H15B0.9600
N2—C11.339 (6)C15—H15C0.9600
N2—C101.464 (6)C16—H16A0.9600
N3—C151.390 (10)C16—H16B0.9600
N3—C161.470 (10)C16—H16C0.9600
N3—C141.374 (6)
Cl1—Zn2—O194.96 (9)C3—C4—C5119.3 (4)
Cl1—Zn2—O299.10 (11)C4—C5—C6122.6 (4)
Cl1—Zn2—O4110.29 (11)C5—C6—C7118.8 (4)
Cl1—Zn2—N1122.65 (10)C6—C7—C8121.3 (4)
O1—Zn2—O2164.05 (13)C7—C8—C9119.1 (4)
O1—Zn2—O474.99 (11)O1—C9—C4116.2 (3)
O1—Zn2—N175.37 (12)O1—C9—C8122.5 (4)
O2—Zn2—O4106.75 (13)C4—C9—C8121.2 (3)
O2—Zn2—N190.64 (13)N2—C10—C11114.2 (4)
O4—Zn2—N1120.51 (14)O2—C11—C10119.1 (4)
O7—Zn1—O7i180.00O2—C11—O3124.1 (4)
O7—Zn1—O8i89.06 (15)O3—C11—C10116.8 (4)
O6i—Zn1—O890.8 (2)O1—C12—C13108.3 (3)
O7i—Zn1—O889.06 (15)O4—C13—O5124.6 (4)
O8—Zn1—O8i180.00O5—C13—C12115.8 (4)
O6i—Zn1—O7i90.4 (2)O4—C13—C12119.6 (4)
O6i—Zn1—O8i89.2 (2)C2—C1—H1A126.00
O7i—Zn1—O8i90.94 (15)N2—C1—H1A126.00
O7—Zn1—O890.94 (15)C1—C2—H2A127.00
O6i—Zn1—O789.6 (2)C3—C2—H2A127.00
O6—Zn1—O790.4 (2)C6—C5—H5A119.00
O6—Zn1—O889.2 (2)C4—C5—H5A119.00
O6—Zn1—O6i180.00C5—C6—H6A121.00
O6—Zn1—O7i89.6 (2)C7—C6—H6A121.00
O6—Zn1—O8i90.8 (2)C8—C7—H7A119.00
Zn2—O1—C12106.2 (2)C6—C7—H7A119.00
C9—O1—C12120.6 (3)C7—C8—H8A120.00
Zn2—O1—C9125.9 (2)C9—C8—H8A120.00
Zn2—O2—C11127.5 (3)N2—C10—H10A109.00
Zn2—O4—C13119.3 (3)C11—C10—H10B109.00
Zn1—O6—C14135.3 (5)H10A—C10—H10B108.00
H7B—O7—H7C109.00N2—C10—H10B109.00
Zn1—O7—H7C110.00C11—C10—H10A109.00
Zn1—O7—H7B109.00C13—C12—H12A110.00
H8B—O8—H8C109.00O1—C12—H12B110.00
Zn1—O8—H8B109.00O1—C12—H12A110.00
Zn1—O8—H8C109.00C13—C12—H12B110.00
N2—N1—C3106.0 (3)H12A—C12—H12B108.00
Zn2—N1—C3129.2 (3)O6—C14—N3123.6 (5)
Zn2—N1—N2120.7 (2)O6—C14—H14A111.00
N1—N2—C1111.5 (3)N3—C14—H14A125.00
N1—N2—C10121.0 (3)N3—C15—H15A109.00
C1—N2—C10126.8 (4)N3—C15—H15B110.00
C14—N3—C16106.6 (5)N3—C15—H15C109.00
C14—N3—C15138.4 (6)H15A—C15—H15B109.00
C15—N3—C16115.0 (6)H15A—C15—H15C109.00
N2—C1—C2108.2 (4)H15B—C15—H15C109.00
C1—C2—C3105.7 (4)N3—C16—H16A109.00
N1—C3—C2108.6 (3)N3—C16—H16B109.00
N1—C3—C4124.3 (3)N3—C16—H16C109.00
C2—C3—C4127.0 (3)H16A—C16—H16B110.00
C3—C4—C9123.7 (4)H16A—C16—H16C110.00
C5—C4—C9116.9 (4)H16B—C16—H16C109.00
Cl1—Zn2—O1—C9−69.9 (3)Zn2—N1—N2—C10−29.1 (5)
Cl1—Zn2—O1—C1279.9 (2)C3—N1—N2—C11.0 (4)
O4—Zn2—O1—C9−179.6 (4)Zn2—N1—N2—C1160.1 (3)
O4—Zn2—O1—C12−29.8 (2)N2—N1—C3—C4−177.7 (4)
N1—Zn2—O1—C952.6 (3)C3—N1—N2—C10171.8 (4)
N1—Zn2—O1—C12−157.7 (3)Zn2—N1—C3—C2−156.8 (3)
Cl1—Zn2—O2—C11150.2 (3)Zn2—N1—C3—C425.6 (6)
O4—Zn2—O2—C11−95.3 (4)N2—N1—C3—C2−0.1 (4)
N1—Zn2—O2—C1127.0 (4)N1—N2—C10—C1161.6 (5)
Cl1—Zn2—O4—C13−66.6 (4)C1—N2—C10—C11−129.1 (4)
O1—Zn2—O4—C1323.2 (3)C10—N2—C1—C2−171.6 (4)
O2—Zn2—O4—C13−173.3 (3)N1—N2—C1—C2−1.4 (5)
N1—Zn2—O4—C1385.7 (4)C15—N3—C14—O66.5 (13)
Cl1—Zn2—N1—N2−111.0 (3)C16—N3—C14—O6−171.4 (7)
Cl1—Zn2—N1—C342.7 (4)N2—C1—C2—C31.3 (5)
O1—Zn2—N1—N2162.5 (3)C1—C2—C3—N1−0.7 (5)
O1—Zn2—N1—C3−43.8 (3)C1—C2—C3—C4176.8 (4)
O2—Zn2—N1—N2−9.8 (3)N1—C3—C4—C5−171.2 (4)
O2—Zn2—N1—C3143.9 (3)N1—C3—C4—C913.3 (6)
O4—Zn2—N1—N2100.2 (3)C2—C3—C4—C511.7 (7)
O4—Zn2—N1—C3−106.1 (3)C2—C3—C4—C9−163.8 (4)
O7i—Zn1—O6—C1460.2 (8)C3—C4—C9—O1−3.7 (6)
O8i—Zn1—O6—C14−30.8 (8)C3—C4—C5—C6−175.1 (5)
O7—Zn1—O6—C14−119.8 (8)C9—C4—C5—C60.7 (7)
O8—Zn1—O6—C14149.3 (8)C5—C4—C9—C8−0.9 (6)
C12—O1—C9—C4176.1 (4)C3—C4—C9—C8174.6 (4)
C9—O1—C12—C13−177.2 (4)C5—C4—C9—O1−179.3 (4)
C12—O1—C9—C8−2.2 (6)C4—C5—C6—C70.7 (8)
Zn2—O1—C12—C1331.1 (4)C5—C6—C7—C8−1.8 (8)
Zn2—O1—C9—C4−38.1 (5)C6—C7—C8—C91.6 (8)
Zn2—O1—C9—C8143.6 (4)C7—C8—C9—O1178.1 (4)
Zn2—O2—C11—O3173.3 (3)C7—C8—C9—C4−0.2 (7)
Zn2—O2—C11—C10−4.1 (6)N2—C10—C11—O2−42.3 (6)
Zn2—O4—C13—O5165.2 (4)N2—C10—C11—O3140.2 (4)
Zn2—O4—C13—C12−12.3 (6)O1—C12—C13—O4−16.5 (6)
Zn1—O6—C14—N3−152.5 (5)O1—C12—C13—O5165.7 (4)
D—H···AD—HH···AD···AD—H···A
O7—H7B···O3ii0.961.832.710 (5)151
O8—H8B···O2iii0.962.212.941 (5)132
O8—H8C···O5iv0.961.912.715 (5)140
C2—H2A···Cl1v0.932.793.668 (5)159
C10—H10B···O5vi0.972.593.511 (6)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O7—H7B⋯O3i0.961.832.710 (5)151
O8—H8B⋯O2ii0.962.212.941 (5)132
O8—H8C⋯O5iii0.961.912.715 (5)140
C2—H2A⋯Cl1iv0.932.793.668 (5)159
C10—H10B⋯O5v0.972.593.511 (6)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  3 in total

1.  A Semiconducting Lamella Polymer

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-08-18       Impact factor: 15.336

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  A new self-penetrating uniform net, (8,4) (or 8(6)), containing planar four-coordinate nodes.

Authors:  Ming-Liang Tong; Xiao-Ming Chen; Stuart R Batten
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

  3 in total

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