Literature DB >> 22719344

Chlorido{μ-2,6-bis-[(2-amino-eth-yl)imino-meth-yl]-4-chloro-phenolato}-μ-oxido-dicopper(II) trihydrate.

Jing-Jing Zhou, Wei Xiao, Jia-Wei Mao, Hong Zhou.   

Abstract

In the title dinuclear complex, [Cu(2)(C(14)H(20)ClN(4)O)ClO3H(2)O, one Cu(II) cation assumes a distorted square-planar coordination geometry and the other a distorted square-pyramidal coordination geometry. Both Cu(II) cations are N,N',O-chelated by one arm of the 2,6-bis-[(2-amino-eth-yl)imino-meth-yl]-4-chloro-phenolate anion, and one oxide anion bridges the two Cu(II) cations, forming a dinuclear complex. One of the Cu(II) cations is further coordinated by an Cl(-) anion in the apical direction. In the crystal, lattice water mol-ecules are linked with the complex mol-ecule via O-H⋯Cl hydrogen bonds while O-H⋯O hydrogen bonding occurs between lattice water mol-ecules , forming three-dimensional network structure.

Entities:  

Year:  2012        PMID: 22719344      PMCID: PMC3379123          DOI: 10.1107/S160053681202301X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Gagne et al. (1981 ▶). For a related oxygen anion-bridging complex, see: Olmstead et al. (2011 ▶). For the biological activity of Schiff bases, see: Raman et al. (2007 ▶); Hao et al. (2006 ▶). For the biological properties of binuclear complexes, see: Tian et al. (2007 ▶); Anbu et al. (2009 ▶). Several proteins in vivo contain transition metal atoms, especially, CuII, see: Dede et al. (2009 ▶); Veysel et al. (2003 ▶); Asokan et al. (1995 ▶).

Experimental

Crystal data

[Cu2(C14H20ClN4O)ClO]·3H2O M = 528.37 Monoclinic, a = 11.201 (5) Å b = 12.387 (7) Å c = 16.718 (7) Å β = 93.18 (4)° V = 2316.0 (19) Å3 Z = 4 Mo Kα radiation μ = 2.10 mm−1 T = 291 K 0.30 × 0.26 × 0.24 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.572, T max = 0.633 12029 measured reflections 4087 independent reflections 3286 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.175 S = 1.02 4087 reflections 244 parameters H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.94 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008) ▶; program(s) used to refine structure: SHELXTL ▶; molecular graphics: SHELXTL ▶; software used to prepare material for publication: SHELXTL ▶. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681202301X/xu5529sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681202301X/xu5529Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C14H20ClN4O)ClO]·3H2OF(000) = 1080
Mr = 528.37Dx = 1.515 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4001 reflections
a = 11.201 (5) Åθ = 2.4–26.6°
b = 12.387 (7) ŵ = 2.10 mm1
c = 16.718 (7) ÅT = 291 K
β = 93.18 (4)°Block, green
V = 2316.0 (19) Å30.30 × 0.26 × 0.24 mm
Z = 4
Bruker SMART APEX CCD diffractometer4087 independent reflections
Radiation source: sealed tube3286 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
phi and ω scansθmax = 25.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −13→13
Tmin = 0.572, Tmax = 0.633k = −14→11
12029 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.175H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.080P)2 + 12.660P] where P = (Fo2 + 2Fc2)/3
4087 reflections(Δ/σ)max = 0.076
244 parametersΔρmax = 0.65 e Å3
0 restraintsΔρmin = −0.94 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.29197 (15)0.09726 (13)0.30847 (10)0.0409 (4)
Cl20.31005 (15)0.62287 (14)0.44102 (10)0.0435 (4)
Cu10.43928 (7)0.66390 (6)0.32886 (5)0.0360 (2)
Cu20.22384 (7)0.67193 (6)0.21370 (5)0.0360 (2)
C10.6375 (6)0.7673 (6)0.4411 (4)0.0388 (15)
H1A0.62330.81170.48740.047*
H1B0.70890.79530.41800.047*
C20.6665 (7)0.6538 (6)0.4715 (4)0.0451 (17)
H2A0.60550.63020.50660.054*
H2B0.74270.65410.50200.054*
C30.6721 (6)0.5750 (5)0.4003 (4)0.0376 (15)
H3A0.72190.60640.36070.045*
H3B0.71010.50860.41910.045*
C40.5264 (6)0.4435 (6)0.3522 (4)0.0395 (15)
H40.58240.39500.37440.047*
C50.3361 (6)0.4596 (5)0.2694 (4)0.0360 (15)
C60.4249 (6)0.3996 (6)0.3141 (4)0.0412 (16)
C70.4106 (6)0.2905 (6)0.3267 (4)0.0358 (14)
H70.46770.25240.35770.043*
C80.3091 (7)0.2369 (6)0.2923 (4)0.0460 (17)
C90.2214 (6)0.2954 (5)0.2455 (4)0.0369 (14)
H90.15540.26020.22150.044*
C100.2354 (6)0.4051 (5)0.2363 (4)0.0396 (15)
C110.1424 (6)0.4496 (5)0.1867 (4)0.0409 (16)
H110.09130.39890.16210.049*
C120.0115 (6)0.5819 (6)0.1123 (5)0.0472 (18)
H12A−0.05330.60590.14400.057*
H12B−0.01570.51760.08370.057*
C130.0339 (7)0.6702 (6)0.0498 (4)0.0428 (16)
H13A−0.03030.67100.00840.051*
H13B0.10870.65700.02490.051*
C140.0392 (6)0.7802 (5)0.0960 (4)0.0376 (15)
H14A0.05690.83610.05780.045*
H14B−0.04030.79470.11360.045*
N10.5352 (5)0.7852 (5)0.3811 (3)0.0398 (13)
H1C0.56400.82430.34110.048*
H1D0.48270.82790.40500.048*
N20.5521 (5)0.5481 (5)0.3605 (3)0.0417 (13)
N30.1152 (5)0.5507 (5)0.1690 (3)0.0405 (13)
N40.1253 (5)0.7929 (5)0.1670 (3)0.0437 (14)
H4A0.08300.81910.20690.052*
H4B0.17680.84520.15450.052*
O10.3458 (4)0.5674 (4)0.2586 (2)0.0373 (10)
O20.3320 (4)0.7525 (3)0.2702 (3)0.0360 (10)
O1W0.2820 (9)−0.0067 (9)0.4419 (7)0.144 (4)
H1WD0.26530.04940.41420.173*
H1WC0.26920.00550.49070.216*
O2W0.1297 (9)0.4729 (8)0.3981 (7)0.150 (4)
H2WD0.18020.49460.36560.180*
H2WB0.10940.52530.42720.224*
O3W0.0267 (9)0.7040 (8)0.3693 (5)0.120 (3)
H3WD0.09880.68290.36810.144*
H3WA−0.01360.65750.39370.181*
U11U22U33U12U13U23
Cl10.0444 (9)0.0364 (9)0.0429 (9)−0.0072 (7)0.0111 (7)0.0118 (7)
Cl20.0412 (9)0.0478 (10)0.0426 (9)−0.0115 (7)0.0131 (7)0.0021 (7)
Cu10.0350 (4)0.0388 (5)0.0352 (4)−0.0085 (3)0.0097 (3)0.0019 (3)
Cu20.0359 (4)0.0376 (5)0.0352 (4)0.0013 (3)0.0082 (3)0.0003 (3)
C10.038 (3)0.045 (4)0.034 (3)0.009 (3)0.007 (3)0.010 (3)
C20.047 (4)0.039 (4)0.050 (4)−0.003 (3)0.014 (3)0.014 (3)
C30.046 (4)0.036 (3)0.033 (3)−0.005 (3)0.015 (3)0.016 (3)
C40.034 (3)0.040 (4)0.044 (4)0.003 (3)0.003 (3)0.005 (3)
C50.040 (3)0.039 (4)0.030 (3)0.017 (3)0.009 (3)−0.010 (3)
C60.038 (4)0.042 (4)0.044 (4)0.012 (3)0.012 (3)−0.006 (3)
C70.038 (3)0.043 (4)0.026 (3)0.002 (3)0.006 (3)0.003 (3)
C80.054 (4)0.032 (4)0.051 (4)0.007 (3)0.000 (3)−0.008 (3)
C90.039 (4)0.038 (3)0.035 (3)−0.007 (3)0.006 (3)−0.001 (3)
C100.047 (4)0.028 (3)0.044 (4)0.016 (3)0.000 (3)0.007 (3)
C110.047 (4)0.035 (4)0.041 (4)0.011 (3)−0.002 (3)−0.016 (3)
C120.038 (4)0.031 (4)0.073 (5)0.002 (3)−0.003 (3)−0.008 (3)
C130.043 (4)0.047 (4)0.038 (4)0.005 (3)0.001 (3)−0.005 (3)
C140.038 (3)0.032 (3)0.040 (4)−0.011 (3)−0.020 (3)0.017 (3)
N10.036 (3)0.040 (3)0.044 (3)0.009 (2)0.008 (2)−0.015 (3)
N20.047 (3)0.042 (3)0.037 (3)0.007 (3)0.016 (3)−0.002 (2)
N30.046 (3)0.039 (3)0.038 (3)0.002 (3)0.014 (2)−0.007 (2)
N40.044 (3)0.045 (3)0.040 (3)−0.020 (3)−0.014 (3)0.010 (3)
O10.036 (2)0.043 (3)0.034 (2)0.001 (2)0.0127 (19)−0.0118 (19)
O20.036 (2)0.032 (2)0.041 (2)−0.0120 (19)0.0114 (19)0.0163 (19)
O1W0.139 (9)0.154 (9)0.141 (9)−0.022 (7)0.014 (7)−0.009 (7)
O2W0.133 (8)0.115 (8)0.208 (12)0.016 (6)0.076 (8)0.047 (8)
O3W0.123 (7)0.119 (7)0.118 (7)−0.016 (6)0.000 (6)0.015 (6)
Cl1—C81.763 (7)C7—C81.411 (10)
Cl2—Cu12.484 (2)C7—H70.9300
Cu1—O21.865 (4)C8—C91.420 (10)
Cu1—O11.941 (4)C9—C101.377 (9)
Cu1—N21.965 (6)C9—H90.9300
Cu1—N12.017 (6)C10—C111.408 (9)
Cu1—Cu23.0040 (18)C11—N31.319 (9)
Cu2—O21.797 (4)C11—H110.9300
Cu2—N41.994 (6)C12—N31.508 (9)
Cu2—O11.997 (5)C12—C131.542 (10)
Cu2—N32.048 (6)C12—H12A0.9700
C1—N11.498 (8)C12—H12B0.9700
C1—C21.524 (9)C13—C141.565 (9)
C1—H1A0.9700C13—H13A0.9700
C1—H1B0.9700C13—H13B0.9700
C2—C31.543 (10)C14—N41.496 (7)
C2—H2A0.9700C14—H14A0.9700
C2—H2B0.9700C14—H14B0.9700
C3—N21.503 (9)N1—H1C0.9000
C3—H3A0.9700N1—H1D0.9000
C3—H3B0.9700N4—H4A0.9000
C4—N21.333 (9)N4—H4B0.9000
C4—C61.384 (10)O1W—H1WD0.8501
C4—H40.9300O1W—H1WC0.8499
C5—O11.353 (8)O2W—H2WD0.8496
C5—C101.401 (10)O2W—H2WB0.8500
C5—C61.420 (9)O3W—H3WD0.8500
C6—C71.378 (10)O3W—H3WA0.8501
O2—Cu1—O174.6 (2)C7—C8—C9120.1 (6)
O2—Cu1—N2163.2 (2)C7—C8—Cl1119.4 (5)
O1—Cu1—N291.8 (2)C9—C8—Cl1120.5 (5)
O2—Cu1—N195.8 (2)C10—C9—C8119.0 (6)
O1—Cu1—N1167.6 (2)C10—C9—H9120.5
N2—Cu1—N196.2 (2)C8—C9—H9120.5
O2—Cu1—Cl297.57 (13)C9—C10—C5121.7 (6)
O1—Cu1—Cl290.79 (13)C9—C10—C11111.5 (6)
N2—Cu1—Cl292.30 (16)C5—C10—C11126.7 (6)
N1—Cu1—Cl298.30 (17)N3—C11—C10131.2 (7)
O2—Cu1—Cu234.16 (13)N3—C11—H11114.4
O1—Cu1—Cu241.00 (14)C10—C11—H11114.4
N2—Cu1—Cu2132.74 (18)N3—C12—C13117.3 (6)
N1—Cu1—Cu2129.95 (17)N3—C12—H12A108.0
Cl2—Cu1—Cu290.55 (6)C13—C12—H12A108.0
O2—Cu2—N497.5 (2)N3—C12—H12B108.0
O2—Cu2—O174.66 (19)C13—C12—H12B108.0
N4—Cu2—O1170.4 (2)H12A—C12—H12B107.2
O2—Cu2—N3165.6 (2)C12—C13—C14106.7 (5)
N4—Cu2—N395.9 (2)C12—C13—H13A110.4
O1—Cu2—N392.4 (2)C14—C13—H13A110.4
O2—Cu2—Cu135.64 (14)C12—C13—H13B110.4
N4—Cu2—Cu1133.09 (16)C14—C13—H13B110.4
O1—Cu2—Cu139.61 (13)H13A—C13—H13B108.6
N3—Cu2—Cu1130.51 (17)N4—C14—C13119.2 (5)
N1—C1—C2120.0 (6)N4—C14—H14A107.5
N1—C1—H1A107.3C13—C14—H14A107.5
C2—C1—H1A107.3N4—C14—H14B107.5
N1—C1—H1B107.3C13—C14—H14B107.5
C2—C1—H1B107.3H14A—C14—H14B107.0
H1A—C1—H1B106.9C1—N1—Cu1123.3 (4)
C1—C2—C3110.1 (6)C1—N1—H1C106.5
C1—C2—H2A109.6Cu1—N1—H1C106.5
C3—C2—H2A109.6C1—N1—H1D106.5
C1—C2—H2B109.6Cu1—N1—H1D106.5
C3—C2—H2B109.6H1C—N1—H1D106.5
H2A—C2—H2B108.2C4—N2—C3116.4 (6)
N2—C3—C2114.1 (5)C4—N2—Cu1123.3 (5)
N2—C3—H3A108.7C3—N2—Cu1120.2 (4)
C2—C3—H3A108.7C11—N3—C12123.0 (6)
N2—C3—H3B108.7C11—N3—Cu2119.3 (5)
C2—C3—H3B108.7C12—N3—Cu2117.5 (4)
H3A—C3—H3B107.6C14—N4—Cu2123.4 (4)
N2—C4—C6126.7 (6)C14—N4—H4A106.5
N2—C4—H4116.7Cu2—N4—H4A106.5
C6—C4—H4116.7C14—N4—H4B106.5
O1—C5—C10119.5 (6)Cu2—N4—H4B106.5
O1—C5—C6121.8 (6)H4A—N4—H4B106.5
C10—C5—C6118.7 (6)C5—O1—Cu1124.8 (4)
C7—C6—C4114.4 (6)C5—O1—Cu2129.2 (4)
C7—C6—C5120.6 (7)Cu1—O1—Cu299.4 (2)
C4—C6—C5124.8 (7)Cu2—O2—Cu1110.2 (2)
C6—C7—C8119.8 (6)H1WD—O1W—H1WC109.5
C6—C7—H7120.1H2WD—O2W—H2WB109.5
C8—C7—H7120.1H3WD—O3W—H3WA109.5
D—H···AD—HH···AD···AD—H···A
O1W—H1WD···Cl10.851.902.583 (12)136
O2W—H2WB···O3W0.852.573.114 (13)123
O3W—H3WD···Cl20.852.703.478 (10)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WD⋯Cl10.851.902.583 (12)136
O2W—H2WB⋯O3W0.852.573.114 (13)123
O3W—H3WD⋯Cl20.852.703.478 (10)152
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