Literature DB >> 22719328

Bis(acetato-κ(2)O,O')(4,4'-dimethyl-2,2'-bipyridine-κ(2)N,N')copper(II) monohydrate.

Aphiwat Kaewthong, Mongkol Sukwattanasinitt, Nongnuj Muangsin.   

Abstract

In the title compound, [Cu(C(2)H(3)O(2))(2)(C(12)H(12)N(2))(2)]·H(2)O, the Cu(II) atom exhibits a distorted octa-hedral coordination geometry, defined by two N atoms from one 4,4'-dimethyl-2,2'-bipyridine ligand and four O atoms from two acetate ligands. In the crystal, O-H⋯O hydrogen bonds are observed between the coordinated carboxyl-ate O atoms and the solvent water mol-ecule.

Entities:  

Year:  2012        PMID: 22719328      PMCID: PMC3379107          DOI: 10.1107/S1600536812020193

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Willett et al. (2001 ▶); Amani et al. (2009 ▶); Hojjat Kashani et al. (2008 ▶); Alizadeh et al. (2009 ▶, 2010 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Cu(C2H3O2)2(C12H12N2)2]·H2O M = 383.88 Orthorhombic, a = 22.0667 (8) Å b = 9.0192 (3) Å c = 17.4088 (6) Å V = 3464.8 (2) Å3 Z = 8 Mo Kα radiation μ = 1.29 mm−1 T = 296 K 0.48 × 0.43 × 0.26 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.544, T max = 0.715 18193 measured reflections 4559 independent reflections 2835 reflections with I > 2σ(I) R int = 0.091

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.172 S = 1.00 4559 reflections 229 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.87 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812020193/jj2130sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812020193/jj2130Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C2H3O2)2(C12H12N2)2]·H2OF(000) = 1592
Mr = 383.88Dx = 1.472 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 4435 reflections
a = 22.0667 (8) Åθ = 2.3–27.3°
b = 9.0192 (3) ŵ = 1.29 mm1
c = 17.4088 (6) ÅT = 296 K
V = 3464.8 (2) Å3Prism, blue
Z = 80.48 × 0.43 × 0.26 mm
Bruker SMART APEXII CCD area-detector diffractometer4559 independent reflections
Radiation source: sealed X-ray tube2835 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.091
Detector resolution: 8.33 pixels mm-1θmax = 29.0°, θmin = 2.3°
φ and ω scansh = −29→27
Absorption correction: multi-scan (SADABS; Bruker, 2008)k = −12→12
Tmin = 0.544, Tmax = 0.715l = −21→23
18193 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.172H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0896P)2] where P = (Fo2 + 2Fc2)/3
4559 reflections(Δ/σ)max = 0.014
229 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.87 e Å3
Experimental. IR [KBr, cm-1]: 3426, 3100, 1608, 1444, 1118, 770, 621. HRMS (ESI): m/z 389 [M+Na]+.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.23138 (13)0.3008 (3)0.11076 (14)0.0337 (6)
C20.25879 (12)0.3929 (3)0.04944 (14)0.0339 (6)
C30.34865 (14)0.4750 (3)−0.00435 (16)0.0448 (7)
H30.39080.4767−0.00510.054*
C40.31721 (15)0.5568 (3)−0.05769 (16)0.0456 (7)
H40.33840.6127−0.09360.055*
C50.25498 (15)0.5573 (3)−0.05882 (14)0.0412 (6)
C60.22514 (13)0.4722 (3)−0.00311 (15)0.0379 (6)
H60.1830.4693−0.00160.046*
C70.21977 (17)0.6439 (4)−0.11742 (17)0.0546 (9)
H7A0.24030.7355−0.12790.082*
H7B0.180.6644−0.09790.082*
H7C0.21660.5871−0.16390.082*
C80.17017 (14)0.2973 (4)0.12849 (15)0.0404 (6)
H80.14340.35740.10150.049*
C90.14843 (14)0.2055 (4)0.18599 (17)0.0428 (7)
C100.08269 (16)0.2018 (5)0.2063 (2)0.0665 (10)
H10A0.06420.29410.19210.1*
H10B0.07830.18670.26060.1*
H10C0.06330.12210.17920.1*
C110.19084 (14)0.1170 (3)0.22375 (16)0.0421 (7)
H110.17820.05090.26150.051*
C120.25113 (14)0.1271 (3)0.20532 (16)0.0422 (6)
H120.27870.06890.23230.051*
C130.44518 (14)0.1966 (4)0.02471 (18)0.0472 (7)
C140.50052 (17)0.2074 (5)−0.0242 (2)0.0669 (10)
H14A0.51240.1101−0.04070.1*
H14B0.53280.25130.0050.1*
H14C0.4920.2679−0.06830.1*
C150.40175 (14)0.1801 (4)0.25884 (17)0.0465 (7)
C160.4320 (2)0.0955 (4)0.3226 (2)0.0695 (11)
H16A0.47460.11670.32260.104*
H16B0.4258−0.00880.31510.104*
H16C0.41480.12480.3710.104*
N10.27219 (11)0.2172 (3)0.15003 (14)0.0353 (5)
N20.32009 (11)0.3924 (2)0.04910 (12)0.0369 (5)
O10.44010 (10)0.2880 (3)0.08035 (12)0.0499 (5)
O1S0.03896 (17)1.0232 (4)−0.12525 (17)0.0744 (8)
H1S0.062 (3)1.080 (6)−0.145 (3)0.11 (2)*
H2S0.003 (3)1.064 (8)−0.140 (4)0.17 (3)*
O20.40469 (11)0.1061 (3)0.00996 (14)0.0628 (6)
O30.38982 (10)0.1081 (2)0.19769 (12)0.0512 (5)
O40.38908 (14)0.3131 (3)0.26600 (15)0.0721 (8)
Cu10.359174 (16)0.24915 (3)0.122075 (19)0.03621 (15)
U11U22U33U12U13U23
C10.0374 (15)0.0331 (13)0.0306 (12)0.0006 (11)−0.0018 (10)−0.0027 (11)
C20.0383 (15)0.0319 (13)0.0315 (13)0.0038 (10)0.0012 (11)−0.0039 (10)
C30.0423 (16)0.0437 (16)0.0482 (17)−0.0031 (13)0.0049 (13)0.0047 (13)
C40.0516 (19)0.0430 (17)0.0422 (15)−0.0043 (12)0.0065 (13)0.0064 (12)
C50.0577 (19)0.0337 (14)0.0321 (13)0.0085 (11)0.0003 (13)−0.0005 (11)
C60.0361 (15)0.0401 (15)0.0376 (14)0.0067 (11)0.0016 (11)−0.0004 (12)
C70.072 (2)0.0497 (19)0.0425 (17)0.0115 (16)−0.0060 (14)0.0082 (14)
C80.0360 (16)0.0460 (15)0.0393 (15)0.0019 (13)−0.0026 (12)−0.0010 (12)
C90.0431 (17)0.0462 (15)0.0392 (16)−0.0104 (12)0.0023 (12)−0.0018 (13)
C100.042 (2)0.088 (3)0.070 (2)−0.0099 (18)0.0070 (17)0.019 (2)
C110.0495 (18)0.0436 (16)0.0332 (13)−0.0080 (13)0.0008 (12)0.0018 (12)
C120.0500 (18)0.0403 (15)0.0362 (14)0.0007 (12)−0.0036 (13)0.0051 (11)
C130.0342 (16)0.0573 (18)0.0501 (17)0.0060 (14)−0.0013 (13)0.0084 (15)
C140.050 (2)0.079 (2)0.072 (2)0.0076 (18)0.0164 (18)0.008 (2)
C150.0403 (17)0.056 (2)0.0436 (16)0.0002 (14)−0.0090 (13)0.0072 (14)
C160.077 (3)0.072 (2)0.060 (2)0.0003 (19)−0.0247 (19)0.0156 (19)
N10.0384 (13)0.0371 (12)0.0305 (11)0.0022 (9)−0.0003 (10)0.0011 (9)
N20.0348 (12)0.0389 (12)0.0371 (12)0.0010 (9)0.0012 (9)0.0013 (10)
O10.0354 (12)0.0657 (13)0.0487 (13)0.0004 (10)−0.0037 (9)0.0006 (11)
O1S0.065 (2)0.0660 (18)0.092 (2)0.0099 (15)0.0102 (16)0.0145 (16)
O20.0445 (13)0.0694 (16)0.0743 (16)−0.0041 (11)0.0014 (12)−0.0130 (12)
O30.0515 (13)0.0535 (13)0.0486 (12)0.0073 (10)−0.0124 (10)0.0020 (10)
O40.087 (2)0.0588 (15)0.0709 (16)0.0163 (15)−0.0301 (14)−0.0092 (14)
Cu10.0334 (2)0.0398 (3)0.0354 (2)0.00240 (13)−0.00412 (13)−0.00033 (13)
C1—N11.359 (4)C11—C121.372 (4)
C1—C81.386 (4)C11—H110.93
C1—C21.482 (4)C12—N11.343 (4)
C2—N21.353 (3)C12—H120.93
C2—C61.378 (4)C13—O21.237 (4)
C3—N21.349 (3)C13—O11.277 (4)
C3—C41.374 (4)C13—C141.492 (5)
C3—H30.93C14—H14A0.96
C4—C51.373 (5)C14—H14B0.96
C4—H40.93C14—H14C0.96
C5—C61.401 (4)C15—O41.238 (4)
C5—C71.501 (4)C15—O31.275 (4)
C6—H60.93C15—C161.504 (4)
C7—H7A0.96C16—H16A0.96
C7—H7B0.96C16—H16B0.96
C7—H7C0.96C16—H16C0.96
C8—C91.385 (4)N1—Cu12.001 (2)
C8—H80.93N2—Cu12.007 (2)
C9—C111.395 (4)O1—Cu11.959 (2)
C9—C101.493 (5)O1S—H1S0.80 (6)
C10—H10A0.96O1S—H2S0.91 (7)
C10—H10B0.96O3—Cu11.952 (2)
C10—H10C0.96
N1—C1—C8121.4 (3)C9—C11—H11119.9
N1—C1—C2113.8 (2)N1—C12—C11122.9 (3)
C8—C1—C2124.8 (3)N1—C12—H12118.5
N2—C2—C6122.5 (2)C11—C12—H12118.5
N2—C2—C1114.2 (2)O2—C13—O1121.3 (3)
C6—C2—C1123.3 (3)O2—C13—C14121.1 (3)
N2—C3—C4121.8 (3)O1—C13—C14117.5 (3)
N2—C3—H3119.1C13—C14—H14A109.5
C4—C3—H3119.1C13—C14—H14B109.5
C5—C4—C3121.1 (3)H14A—C14—H14B109.5
C5—C4—H4119.4C13—C14—H14C109.5
C3—C4—H4119.4H14A—C14—H14C109.5
C4—C5—C6117.3 (2)H14B—C14—H14C109.5
C4—C5—C7121.9 (3)O4—C15—O3122.1 (3)
C6—C5—C7120.8 (3)O4—C15—C16121.2 (3)
C2—C6—C5119.4 (3)O3—C15—C16116.8 (3)
C2—C6—H6120.3C15—C16—H16A109.5
C5—C6—H6120.3C15—C16—H16B109.5
C5—C7—H7A109.5H16A—C16—H16B109.5
C5—C7—H7B109.5C15—C16—H16C109.5
H7A—C7—H7B109.5H16A—C16—H16C109.5
C5—C7—H7C109.5H16B—C16—H16C109.5
H7A—C7—H7C109.5C12—N1—C1117.9 (3)
H7B—C7—H7C109.5C12—N1—Cu1126.4 (2)
C9—C8—C1120.8 (3)C1—N1—Cu1115.70 (19)
C9—C8—H8119.6C3—N2—C2117.9 (2)
C1—C8—H8119.6C3—N2—Cu1126.3 (2)
C8—C9—C11116.8 (3)C2—N2—Cu1115.43 (16)
C8—C9—C10121.4 (3)C13—O1—Cu1104.23 (19)
C11—C9—C10121.8 (3)H1S—O1S—H2S100 (5)
C9—C10—H10A109.5C15—O3—Cu1107.6 (2)
C9—C10—H10B109.5O3—Cu1—O192.91 (10)
H10A—C10—H10B109.5O3—Cu1—N194.27 (9)
C9—C10—H10C109.5O1—Cu1—N1171.94 (9)
H10A—C10—H10C109.5O3—Cu1—N2174.64 (9)
H10B—C10—H10C109.5O1—Cu1—N292.41 (9)
C12—C11—C9120.2 (3)N1—Cu1—N280.46 (10)
C12—C11—H11119.9
N1—C1—C2—N2−7.7 (3)C2—C1—N1—Cu14.5 (3)
C8—C1—C2—N2172.0 (3)C4—C3—N2—C2−0.6 (4)
N1—C1—C2—C6172.1 (2)C4—C3—N2—Cu1172.2 (2)
C8—C1—C2—C6−8.2 (4)C6—C2—N2—C31.0 (4)
N2—C3—C4—C5−0.2 (4)C1—C2—N2—C3−179.2 (2)
C3—C4—C5—C60.5 (4)C6—C2—N2—Cu1−172.5 (2)
C3—C4—C5—C7−179.0 (3)C1—C2—N2—Cu17.3 (3)
N2—C2—C6—C5−0.7 (4)O2—C13—O1—Cu1−2.6 (4)
C1—C2—C6—C5179.5 (2)C14—C13—O1—Cu1174.6 (3)
C4—C5—C6—C2−0.1 (4)O4—C15—O3—Cu16.1 (4)
C7—C5—C6—C2179.4 (3)C16—C15—O3—Cu1−174.1 (3)
N1—C1—C8—C9−1.5 (4)C15—O3—Cu1—O190.9 (2)
C2—C1—C8—C9178.8 (3)C15—O3—Cu1—N1−92.8 (2)
C1—C8—C9—C11−0.7 (4)C13—O1—Cu1—O392.8 (2)
C1—C8—C9—C10179.4 (3)C13—O1—Cu1—N2−87.8 (2)
C8—C9—C11—C122.3 (4)C12—N1—Cu1—O31.4 (2)
C10—C9—C11—C12−177.8 (3)C1—N1—Cu1—O3178.4 (2)
C9—C11—C12—N1−1.8 (4)C12—N1—Cu1—N2−177.6 (2)
C11—C12—N1—C1−0.4 (4)C1—N1—Cu1—N2−0.6 (2)
C11—C12—N1—Cu1176.5 (2)C3—N2—Cu1—O1−0.5 (2)
C8—C1—N1—C122.1 (4)C2—N2—Cu1—O1172.35 (18)
C2—C1—N1—C12−178.2 (2)C3—N2—Cu1—N1−176.8 (2)
C8—C1—N1—Cu1−175.2 (2)C2—N2—Cu1—N1−3.87 (18)
D—H···AD—HH···AD···AD—H···A
O1S—H1S···O4i0.80 (6)2.12 (6)2.878 (4)158 (5)
O1S—H2S···O1ii0.91 (7)2.19 (7)2.876 (4)132 (6)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1S—H1S⋯O4i0.80 (6)2.12 (6)2.878 (4)158 (5)
O1S—H2S⋯O1ii0.91 (7)2.19 (7)2.876 (4)132 (6)

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Crystal chemistry of the 4,4'-dimethyl-2,2'bipyridine/copper bromide system.

Authors:  R D Willett; G Pon; C Nagy
Journal:  Inorg Chem       Date:  2001-08-13       Impact factor: 5.165

3.  Tetra-chlorido(4,4'-dimethyl-2,2'-bipyridine-κN,N')platinum(IV).

Authors:  Leila Hojjat Kashani; Vahid Amani; Mohammad Yousefi; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-13

4.  (6,6'-Dimethyl-2,2'-bipyridine-κN,N')diiodidozinc(II).

Authors:  Robabeh Alizadeh; Khadijeh Kalateh; Zeinab Khoshtarkib; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

5.  Dibromido(4,4'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Robabeh Alizadeh; Parisa Mohammadi Eshlaghi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24
  5 in total

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