Literature DB >> 22719292

cyclo-Tetra-kis{μ-N'-[(8-oxidoquinolin-7-yl)methyl-idene]isonicotino-hydrazidato}tetra-zinc tetra-hydrate.

Xiang-Wen Wu1, Qing-Long Li, Jian-Ping Ma, Yu-Bin Dong.   

Abstract

In the title compound, [Zn(4)(C(16)H(10)N(4)O(2))(4)]·4H(2)O, the N'-[(8-oxidoquinolin-7-yl)methyl-idene]isonicotinohydrazidate (L(2-)) ligand binds to the metal ions, forming stable five- and six-membered chelate rings, leaving the pyridyl groups free. The compound is a tetra-nuclear Zn(II) complex centered about a fourfold roto-inversion axis, with the ligand coordinating in the doubly deprotonated form. The Zn(II) atom has a distorted square-pyramidal geometry being coordinated by one N and two O-atom donors from the doubly deprotonated L(2-) ligand, and by one N atom and one O-atom donor from a symmetry-related L(2-) ligand. In the crystal, four symmetry-related lattice water mol-ecules, centred about a fourfold roto-inversion axis, form a cyclic tetra-mer through O-H⋯O hydrogen bonds. These tetra-mers connect to the complex mol-ecules through O-H⋯N hydrogen bonds, forming a chain propagating along [100]. Neighbouring mol-ecules are linked by π-π inter-actions [centroid-centroid distance = 3.660 (2) Å] involving the quinolidine rings.

Entities:  

Year:  2012        PMID: 22719292      PMCID: PMC3379071          DOI: 10.1107/S1600536812018995

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For heterometallic coordination polymers and coordination compounds involving bridging N-donor ligands, see: Palacios et al. (2008 ▶); Tao et al. (2002 ▶); Dong et al. (2005 ▶). For details of bond lengths in similar zinc(II) complexes, see: Kumar et al. (2006 ▶); Woodward et al. (2006 ▶).

Experimental

Crystal data

[Zn4(C16H10N4O2)4]·4H2O M = 1494.66 Tetragonal, a = 21.407 (2) Å c = 13.626 (3) Å V = 6244.1 (15) Å3 Z = 4 Mo Kα radiation μ = 1.60 mm−1 T = 298 K 0.13 × 0.11 × 0.07 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.819, T max = 0.897 16035 measured reflections 2900 independent reflections 2324 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.087 S = 1.03 2900 reflections 217 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812018995/su2415sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018995/su2415Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn4(C16H10N4O2)4]·4H2ODx = 1.590 Mg m3
Mr = 1494.66Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 2897 reflections
Hall symbol: I 41/aθ = 2.6–22.7°
a = 21.407 (2) ŵ = 1.60 mm1
c = 13.626 (3) ÅT = 298 K
V = 6244.1 (15) Å3Block, yellow
Z = 40.13 × 0.11 × 0.07 mm
F(000) = 3040
Bruker SMART CCD area-detector diffractometer2900 independent reflections
Radiation source: fine-focus sealed tube2324 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
phi and ω scansθmax = 25.5°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −22→25
Tmin = 0.819, Tmax = 0.897k = −25→25
16035 measured reflectionsl = −13→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0372P)2 + 5.0654P] where P = (Fo2 + 2Fc2)/3
2900 reflections(Δ/σ)max = 0.001
217 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.10071 (14)0.45462 (15)1.1624 (3)0.0485 (8)
H11.11190.45301.22830.058*
C21.12416 (16)0.50312 (16)1.1052 (3)0.0611 (10)
H21.15060.53291.13240.073*
C31.10790 (16)0.50630 (15)1.0094 (3)0.0590 (10)
H31.12300.53880.97070.071*
C41.06842 (14)0.46097 (14)0.9677 (3)0.0442 (8)
C51.04647 (12)0.41352 (13)1.0312 (2)0.0336 (6)
C61.00568 (12)0.36577 (12)0.9960 (2)0.0303 (6)
C70.98754 (13)0.36698 (13)0.8981 (2)0.0361 (7)
C81.01152 (15)0.41496 (15)0.8363 (2)0.0497 (8)
H81.00030.41490.77040.060*
C91.04951 (15)0.46024 (16)0.8689 (3)0.0538 (9)
H91.06330.49110.82620.065*
C100.94522 (13)0.32259 (14)0.8548 (2)0.0394 (7)
H100.93970.32410.78710.047*
C110.84867 (13)0.20093 (13)0.9058 (2)0.0374 (7)
C120.80184 (14)0.15938 (14)0.8575 (3)0.0453 (8)
C130.77607 (18)0.17239 (18)0.7669 (3)0.0684 (11)
H130.78960.20650.73030.082*
C140.7291 (2)0.1330 (2)0.7317 (4)0.0865 (15)
H140.71060.14340.67210.104*
C150.7364 (2)0.0697 (2)0.8615 (4)0.0953 (16)
H150.72440.03320.89350.114*
C160.78125 (17)0.10645 (17)0.9055 (3)0.0641 (10)
H160.79740.09580.96660.077*
N11.06328 (10)0.41084 (10)1.12773 (18)0.0352 (6)
N20.91453 (11)0.28117 (11)0.90248 (18)0.0356 (6)
N30.87505 (12)0.24302 (11)0.84775 (18)0.0418 (6)
N40.70908 (18)0.0828 (2)0.7760 (3)0.0948 (13)
O10.85836 (9)0.19375 (9)0.99696 (16)0.0407 (5)
O20.98781 (8)0.32250 (8)1.06007 (13)0.0321 (4)
O30.90970 (15)0.23053 (16)0.6420 (2)0.1038 (11)
H3A0.94340.20980.63710.125*
H3B0.89480.23090.69980.125*
Zn10.910323 (15)0.265779 (15)1.04977 (2)0.03319 (13)
U11U22U33U12U13U23
C10.0442 (18)0.0485 (19)0.053 (2)0.0001 (15)−0.0103 (16)−0.0125 (16)
C20.055 (2)0.048 (2)0.080 (3)−0.0168 (16)−0.010 (2)−0.009 (2)
C30.056 (2)0.0398 (19)0.081 (3)−0.0139 (16)0.004 (2)0.0075 (19)
C40.0402 (17)0.0385 (17)0.054 (2)−0.0054 (14)0.0016 (15)0.0072 (15)
C50.0317 (15)0.0319 (15)0.0371 (17)0.0010 (11)0.0006 (13)0.0033 (13)
C60.0312 (14)0.0295 (14)0.0301 (16)0.0012 (11)0.0024 (12)0.0056 (12)
C70.0407 (16)0.0377 (16)0.0299 (16)−0.0028 (13)0.0030 (13)0.0026 (13)
C80.056 (2)0.059 (2)0.0336 (18)−0.0082 (17)−0.0018 (16)0.0167 (16)
C90.058 (2)0.052 (2)0.051 (2)−0.0124 (17)0.0043 (17)0.0212 (17)
C100.0448 (17)0.0518 (18)0.0214 (15)−0.0025 (14)−0.0032 (13)0.0025 (14)
C110.0369 (16)0.0375 (16)0.0378 (18)0.0022 (13)−0.0078 (14)−0.0077 (14)
C120.0392 (17)0.0460 (18)0.051 (2)0.0003 (14)−0.0057 (15)−0.0151 (16)
C130.077 (3)0.062 (2)0.066 (3)−0.008 (2)−0.033 (2)−0.008 (2)
C140.089 (3)0.090 (3)0.080 (3)−0.004 (3)−0.043 (3)−0.022 (3)
C150.103 (4)0.092 (3)0.091 (4)−0.053 (3)−0.001 (3)−0.016 (3)
C160.069 (2)0.066 (2)0.057 (3)−0.0237 (19)−0.004 (2)−0.004 (2)
N10.0334 (13)0.0337 (13)0.0386 (15)0.0000 (10)−0.0030 (11)−0.0050 (11)
N20.0406 (14)0.0419 (14)0.0244 (13)−0.0053 (11)−0.0040 (11)−0.0006 (11)
N30.0492 (15)0.0483 (15)0.0279 (14)−0.0088 (12)−0.0102 (12)−0.0038 (12)
N40.082 (3)0.105 (3)0.097 (3)−0.035 (2)−0.019 (2)−0.029 (3)
O10.0476 (12)0.0410 (11)0.0335 (12)−0.0098 (9)−0.0072 (10)−0.0006 (10)
O20.0395 (11)0.0339 (10)0.0228 (10)−0.0075 (8)−0.0038 (8)0.0046 (8)
O30.128 (3)0.144 (3)0.0396 (17)−0.007 (2)0.0108 (17)−0.0185 (19)
Zn10.0380 (2)0.0382 (2)0.02344 (19)−0.00629 (14)−0.00228 (14)0.00205 (14)
C1—N11.321 (4)C11—C121.493 (4)
C1—C21.392 (5)C12—C131.380 (5)
C1—H10.9300C12—C161.381 (5)
C2—C31.353 (5)C13—C141.397 (5)
C2—H20.9300C13—H130.9300
C3—C41.406 (5)C14—N41.305 (6)
C3—H30.9300C14—H140.9300
C4—C91.406 (5)C15—N41.333 (6)
C4—C51.414 (4)C15—C161.379 (5)
C5—N11.365 (4)C15—H150.9300
C5—C61.427 (4)C16—H160.9300
C6—O21.329 (3)N1—Zn1i2.081 (2)
C6—C71.390 (4)N2—N31.392 (3)
C7—C81.423 (4)N2—Zn12.036 (2)
C7—C101.439 (4)O1—Zn12.0329 (19)
C8—C91.341 (4)O2—Zn1i2.0350 (18)
C8—H80.9300O2—Zn12.0605 (18)
C9—H90.9300O3—H3A0.8499
C10—N21.281 (3)O3—H3B0.8502
C10—H100.9300Zn1—O2ii2.0350 (18)
C11—O11.269 (4)Zn1—N1ii2.081 (2)
C11—N31.325 (4)
N1—C1—C2123.2 (3)C12—C13—C14118.2 (4)
N1—C1—H1118.4C12—C13—H13120.9
C2—C1—H1118.4C14—C13—H13120.9
C3—C2—C1119.0 (3)N4—C14—C13125.1 (4)
C3—C2—H2120.5N4—C14—H14117.5
C1—C2—H2120.5C13—C14—H14117.5
C2—C3—C4120.6 (3)N4—C15—C16124.4 (4)
C2—C3—H3119.7N4—C15—H15117.8
C4—C3—H3119.7C16—C15—H15117.8
C9—C4—C3124.5 (3)C15—C16—C12119.0 (4)
C9—C4—C5118.8 (3)C15—C16—H16120.5
C3—C4—C5116.7 (3)C12—C16—H16120.5
N1—C5—C4122.1 (3)C1—N1—C5118.4 (3)
N1—C5—C6117.0 (2)C1—N1—Zn1i130.2 (2)
C4—C5—C6120.8 (3)C5—N1—Zn1i111.07 (17)
O2—C6—C7124.3 (2)C10—N2—N3116.5 (2)
O2—C6—C5117.0 (2)C10—N2—Zn1129.4 (2)
C7—C6—C5118.7 (2)N3—N2—Zn1113.97 (17)
C6—C7—C8118.7 (3)C11—N3—N2109.7 (2)
C6—C7—C10123.9 (3)C14—N4—C15115.7 (4)
C8—C7—C10117.5 (3)C11—O1—Zn1110.12 (18)
C9—C8—C7123.0 (3)C6—O2—Zn1i113.95 (16)
C9—C8—H8118.5C6—O2—Zn1126.71 (17)
C7—C8—H8118.5Zn1i—O2—Zn1114.03 (8)
C8—C9—C4120.0 (3)H3A—O3—H3B113.4
C8—C9—H9120.0O1—Zn1—O2ii102.00 (8)
C4—C9—H9120.0O1—Zn1—N278.35 (9)
N2—C10—C7124.9 (3)O2ii—Zn1—N2164.76 (8)
N2—C10—H10117.6O1—Zn1—O2155.73 (8)
C7—C10—H10117.6O2ii—Zn1—O287.94 (8)
O1—C11—N3126.7 (3)N2—Zn1—O286.34 (8)
O1—C11—C12118.0 (3)O1—Zn1—N1ii97.94 (8)
N3—C11—C12115.3 (3)O2ii—Zn1—N1ii80.24 (8)
C13—C12—C16117.5 (3)N2—Zn1—N1ii114.92 (9)
C13—C12—C11122.9 (3)O2—Zn1—N1ii105.61 (8)
C16—C12—C11119.6 (3)
N1—C1—C2—C30.4 (5)C4—C5—N1—Zn1i174.9 (2)
C1—C2—C3—C4−0.7 (5)C6—C5—N1—Zn1i−5.5 (3)
C2—C3—C4—C9−179.5 (3)C7—C10—N2—N3179.0 (3)
C2—C3—C4—C51.0 (5)C7—C10—N2—Zn13.4 (4)
C9—C4—C5—N1179.4 (3)O1—C11—N3—N2−2.2 (4)
C3—C4—C5—N1−1.0 (4)C12—C11—N3—N2176.2 (2)
C9—C4—C5—C6−0.2 (4)C10—N2—N3—C11177.3 (3)
C3—C4—C5—C6179.4 (3)Zn1—N2—N3—C11−6.4 (3)
N1—C5—C6—O2−0.4 (4)C13—C14—N4—C150.4 (8)
C4—C5—C6—O2179.2 (2)C16—C15—N4—C142.6 (8)
N1—C5—C6—C7180.0 (2)N3—C11—O1—Zn19.4 (4)
C4—C5—C6—C7−0.4 (4)C12—C11—O1—Zn1−169.0 (2)
O2—C6—C7—C8−178.2 (3)C7—C6—O2—Zn1i−174.1 (2)
C5—C6—C7—C81.4 (4)C5—C6—O2—Zn1i6.3 (3)
O2—C6—C7—C102.3 (4)C7—C6—O2—Zn1−21.6 (4)
C5—C6—C7—C10−178.1 (3)C5—C6—O2—Zn1158.79 (18)
C6—C7—C8—C9−2.0 (5)C11—O1—Zn1—O2ii−173.51 (18)
C10—C7—C8—C9177.6 (3)C11—O1—Zn1—N2−9.08 (19)
C7—C8—C9—C41.3 (5)C11—O1—Zn1—O2−61.1 (3)
C3—C4—C9—C8−179.8 (3)C11—O1—Zn1—N1ii104.85 (19)
C5—C4—C9—C8−0.2 (5)C10—N2—Zn1—O1−175.7 (3)
C6—C7—C10—N27.5 (5)N3—N2—Zn1—O18.59 (18)
C8—C7—C10—N2−172.0 (3)C10—N2—Zn1—O2ii−82.8 (4)
O1—C11—C12—C13163.3 (3)N3—N2—Zn1—O2ii101.5 (3)
N3—C11—C12—C13−15.3 (5)C10—N2—Zn1—O2−14.7 (3)
O1—C11—C12—C16−14.5 (4)N3—N2—Zn1—O2169.66 (19)
N3—C11—C12—C16166.9 (3)C10—N2—Zn1—N1ii90.9 (3)
C16—C12—C13—C142.8 (6)N3—N2—Zn1—N1ii−84.83 (19)
C11—C12—C13—C14−175.1 (3)C6—O2—Zn1—O173.9 (3)
C12—C13—C14—N4−3.1 (7)Zn1i—O2—Zn1—O1−133.61 (16)
N4—C15—C16—C12−2.7 (7)C6—O2—Zn1—O2ii−170.8 (2)
C13—C12—C16—C15−0.2 (6)Zn1i—O2—Zn1—O2ii−18.38 (9)
C11—C12—C16—C15177.8 (4)C6—O2—Zn1—N223.3 (2)
C2—C1—N1—C5−0.4 (4)Zn1i—O2—Zn1—N2175.75 (10)
C2—C1—N1—Zn1i−173.3 (2)C6—O2—Zn1—N1ii−91.6 (2)
C4—C5—N1—C10.8 (4)Zn1i—O2—Zn1—N1ii60.89 (11)
C6—C5—N1—C1−179.6 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3B···N30.852.082.912 (4)168
O3—H3A···O3iii0.851.992.835 (5)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3B⋯N30.852.082.912 (4)168
O3—H3A⋯O3i0.851.992.835 (5)173

Symmetry code: (i) .

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