Literature DB >> 22707486

The Schizosaccharomyces pombe inv1+ regulatory region is unusually large and contains redundant cis-acting elements that function in a SAGA- and Swi/Snf-dependent fashion.

Sejin Ahn1, Dan Spatt, Fred Winston.   

Abstract

The Schizosaccharomyces pombe inv1(+) gene encodes invertase, the enzyme required for hydrolysis of sucrose and raffinose. Transcription of inv1(+) is regulated by glucose levels, with transcription tightly repressed in high glucose and strongly induced in low glucose. To understand this regulation, we have analyzed the inv1(+) cis-regulatory region and the requirement for the trans-acting coactivators SAGA and Swi/Snf. Surprisingly, deletion of the entire 1-kilobase intergenic region between the inv1(+) TATA element and the upstream open reading frame SPCC191.10 does not significantly alter regulation of inv1(+) transcription. However, a longer deletion that extends through SPCC191.10 abolishes inv1(+) induction in low glucose. Additional analysis demonstrates that there are multiple, redundant regulatory regions spread over 1.5 kb 5' of inv1(+), including within SPCC191.10, that can confer glucose-mediated transcriptional regulation to inv1(+). Furthermore, SPCC191.10 can regulate inv1(+) transcription in an orientation-independent fashion and from a distance as great as 3 kb. With respect to trans-acting factors, both SAGA and Swi/Snf are recruited to SPCC191.10 and to other locations in the large inv1(+) regulatory region in a glucose-dependent fashion, and both are required for inv1(+) derepression. Taken together, these results demonstrate that inv1(+) regulation in S. pombe occurs via the use of multiple regulatory elements and that activation can occur over a great distance, even from elements within other open reading frames.

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Year:  2012        PMID: 22707486      PMCID: PMC3416058          DOI: 10.1128/EC.00141-12

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  39 in total

1.  The nucleosome remodeling complex, Snf/Swi, is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase, Gcn5.

Authors:  P Sudarsanam; Y Cao; L Wu; B C Laurent; F Winston
Journal:  EMBO J       Date:  1999-06-01       Impact factor: 11.598

2.  Snf1-like protein kinase Ssp2 regulates glucose derepression in Schizosaccharomyces pombe.

Authors:  Tomohiko Matsuzawa; Yasuko Fujita; Hideki Tohda; Kaoru Takegawa
Journal:  Eukaryot Cell       Date:  2011-12-02

3.  Isolation and characterization of glucose derepressed invertase mutants from Schizosaccharomyces pombe.

Authors:  Cenk Kig; Sezai Turkel; Güler Temizkan
Journal:  Biosci Biotechnol Biochem       Date:  2005-12       Impact factor: 2.043

Review 4.  Glucose sensing via the protein kinase A pathway in Schizosaccharomyces pombe.

Authors:  C S Hoffman
Journal:  Biochem Soc Trans       Date:  2005-02       Impact factor: 5.407

5.  A new inducible protein expression system in fission yeast based on the glucose-repressed inv1 promoter.

Authors:  J S Iacovoni; P Russell; F Gaits
Journal:  Gene       Date:  1999-05-17       Impact factor: 3.688

6.  Individual subunits of the Ssn6-Tup11/12 corepressor are selectively required for repression of different target genes.

Authors:  Fredrik Fagerström-Billai; Mikaël Durand-Dubief; Karl Ekwall; Anthony P H Wright
Journal:  Mol Cell Biol       Date:  2006-11-13       Impact factor: 4.272

7.  A genomic study of the inter-ORF distances in Saccharomyces cerevisiae.

Authors:  Vicent Pelechano; José García-Martínez; José E Pérez-Ortín
Journal:  Yeast       Date:  2006-07-15       Impact factor: 3.239

8.  Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast.

Authors:  Marianna Wirén; Rebecca A Silverstein; Indranil Sinha; Julian Walfridsson; Hang-Mao Lee; Patricia Laurenson; Lorraine Pillus; Daniel Robyr; Michael Grunstein; Karl Ekwall
Journal:  EMBO J       Date:  2005-08-04       Impact factor: 11.598

Review 9.  Basic methods for fission yeast.

Authors:  Susan L Forsburg; Nicholas Rhind
Journal:  Yeast       Date:  2006-02       Impact factor: 3.239

10.  The mating-type proteins of fission yeast induce meiosis by directly activating mei3 transcription.

Authors:  W J Van Heeckeren; D R Dorris; K Struhl
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

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  2 in total

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Authors:  Philippe Materne; Jayamani Anandhakumar; Valerie Migeot; Ignacio Soriano; Carlo Yague-Sanz; Elena Hidalgo; Carole Mignion; Luis Quintales; Francisco Antequera; Damien Hermand
Journal:  Elife       Date:  2015-06-22       Impact factor: 8.140

2.  Transcription of lncRNA prt, clustered prt RNA sites for Mmi1 binding, and RNA polymerase II CTD phospho-sites govern the repression of pho1 gene expression under phosphate-replete conditions in fission yeast.

Authors:  Debashree Chatterjee; Ana M Sanchez; Yehuda Goldgur; Stewart Shuman; Beate Schwer
Journal:  RNA       Date:  2016-05-10       Impact factor: 4.942

  2 in total

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