Literature DB >> 22698751

[Application of next generation sequencing in microRNA detection].

Hai-Ming Tang1, Hong Chen, Jing Zhang, Jing-Yi Ren, Ning Xu.   

Abstract

MicroRNAs (miRNAs) are a class of ~22nt long non-coding RNAs. They are evolutionarily conserved and play essential roles in the regulation of post-transcriptional gene expression. The rapidly developing next generation sequencing (NGS) has important applications in miRNA detection. This review is focused on the mechanism of three NGS platforms and their applications in miRNA detection. In contrast to traditional methods, NGS has major advantages: high throughput, precise, accurate, and repeatable. Its application includes new miRNAs exploration, detection of miRNA*, miRNA editing, and isomiR and target mRNA detection. As NGS develops, the cost of sequencing is declining which makes it possible for NGS to be widely used in the coming years. Next generation sequencing will greatly promote researches of miRNAs.

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Year:  2012        PMID: 22698751     DOI: 10.3724/sp.j.1005.2012.00784

Source DB:  PubMed          Journal:  Yi Chuan        ISSN: 0253-9772


  3 in total

1.  Systematic identification of miRNA-regulatory networks unveils their potential roles in sugarcane response to Sorghum mosaic virus infection.

Authors:  Yachun Su; Qiong Peng; Hui Ling; Chuihuai You; Qibin Wu; Liping Xu; Youxiong Que
Journal:  BMC Plant Biol       Date:  2022-05-19       Impact factor: 5.260

2.  Combined Small RNA and Degradome Sequencing Reveals Novel MiRNAs and Their Targets in the High-Yield Mutant Wheat Strain Yunong 3114.

Authors:  Feng Chen; Xiangfen Zhang; Ning Zhang; Shasha Wang; Guihong Yin; Zhongdong Dong; Dangqun Cui
Journal:  PLoS One       Date:  2015-09-15       Impact factor: 3.240

3.  Small RNA sequencing reveals a role for sugarcane miRNAs and their targets in response to Sporisorium scitamineum infection.

Authors:  Yachun Su; Yuye Zhang; Ning Huang; Feng Liu; Weihua Su; Liping Xu; Waqar Ahmad; Qibin Wu; Jinlong Guo; Youxiong Que
Journal:  BMC Genomics       Date:  2017-04-24       Impact factor: 3.969

  3 in total

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