Literature DB >> 22695723

Safer DNA extraction from plant tissues using sucrose buffer and glass fiber filter.

Koh-Ichi Takakura1, Takayuki Nishio.   

Abstract

For some plant species, DNA extraction and downstream experiments are inhibited by various chemicals such as polysaccharides and polyphenols. This short communication proposed an organic-solvent free (except for ethanol) extraction method. This method consists of an initial washing step with STE buffer (0.25 M sucrose, 0.03 M Tris, 0.05 M EDTA), followed by DNA extraction using a piece of glass fiber filter. The advantages of this method are its safety and low cost. The purity of the DNA solution obtained using this method is not necessarily as high as that obtained using the STE/CTAB method, but it is sufficient for PCR experiments. These points were demonstrated empirically with two species, Japanese speedwell and common dandelion, for which DNA has proven difficult to amplify via PCR in past studies.

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Year:  2012        PMID: 22695723     DOI: 10.1007/s10265-012-0502-x

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  2 in total

1.  Two micro-scale protocols for the isolation of DNA from polysaccharide-rich plant tissue.

Authors:  Lara D Shepherd; Todd G B McLay
Journal:  J Plant Res       Date:  2010-10-07       Impact factor: 2.629

2.  Isolation and characterization of microsatellite loci in Ainsliaea faurieana (Asteraceae), an endemic plant species on Yakushima Island, Japan, and cross-species amplification in closely related taxa.

Authors:  Y Mitsui; Y Isagi; H Setoguchi
Journal:  Mol Ecol Resour       Date:  2009-02-05       Impact factor: 7.090

  2 in total
  1 in total

1.  Filter paper-based spin column method for cost-efficient DNA or RNA purification.

Authors:  Rui Shi; Ramsey S Lewis; Dilip R Panthee
Journal:  PLoS One       Date:  2018-12-07       Impact factor: 3.240

  1 in total

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