Literature DB >> 22689241

Genome sequence of Fibrella aestuarina BUZ 2(T), a filamentous marine bacterium.

Manuela Filippini1, Weihong Qi, Jochen Blom, Alexander Goesmann, Theo H M Smits, Homayoun C Bagheri.   

Abstract

Fibrella aestuarina BUZ 2(T) is the type strain of the recently characterized genus Fibrella. Here we report the draft genome sequence of this strain, which consists of a single scaffold representing the chromosome (with 11 gaps) and a 161-kb circular plasmid.

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Year:  2012        PMID： 22689241      PMCID： PMC3434725          DOI： 10.1128/JB.00550-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  5 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies.

Authors:  Michael C Schatz; Adam M Phillippy; Daniel D Sommer; Arthur L Delcher; Daniela Puiu; Giuseppe Narzisi; Steven L Salzberg; Mihai Pop
Journal:  Brief Bioinform       Date:  2011-12-23       Impact factor: 11.622

3.  OSLay: optimal syntenic layout of unfinished assemblies.

Authors:  Daniel C Richter; Stephan C Schuster; Daniel H Huson
Journal:  Bioinformatics       Date:  2007-04-26       Impact factor: 6.937

4.  Fibrella aestuarina gen. nov., sp. nov., a filamentous bacterium of the family Cytophagaceae isolated from a tidal flat, and emended description of the genus Rudanella Weon et al. 2008.

Authors:  Manuela Filippini; Miroslav Svercel; Endre Laczko; Andres Kaech; Urs Ziegler; Homayoun C Bagheri
Journal:  Int J Syst Evol Microbiol       Date:  2010-02-26       Impact factor: 2.747

5.  Complete genome sequence of Spirosoma linguale type strain (1).

Authors:  Kathleen Lail; Johannes Sikorski; Elizabeth Saunders; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Patrick Chain; Thomas Brettin; John C Detter; Andrea Schütze; Manfred Rohde; Brian J Tindall; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Feng Chen
Journal:  Stand Genomic Sci       Date:  2010-03-30
  5 in total
  1 in total

1.  Draft Genome Sequence of Cellulose-Digesting Bacterium Sporocytophaga myxococcoides PG-01.

Authors:  Lin Liu; Peiji Gao; Guanjun Chen; Lushan Wang
Journal:  Genome Announc       Date:  2014-11-20
  1 in total

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