Literature DB >> 22688536

Oct4GiP reporter assay to study genes that regulate mouse embryonic stem cell maintenance and self-renewal.

Xiaofeng Zheng1, Guang Hu.   

Abstract

Pluripotency and self-renewal are two defining characteristics of embryonic stem cells (ES cells). Understanding the underlying molecular mechanism will greatly facilitate the use of ES cells for developmental biology studies, disease modeling, drug discovery, and regenerative medicine (reviewed in (1,2)). To expedite the identification and characterization of novel regulators of ES cell maintenance and self-renewal, we developed a fluorescence reporter-based assay to quantitatively measure the self-renewal status in mouse ES cells using the Oct4GiP cells (3). The Oct4GiP cells express the green fluorescent protein (GFP) under the control of the Oct4 gene promoter region (4,5). Oct4 is required for ES cell self-renewal, and is highly expressed in ES cells and quickly down-regulated during differentiation (6,7). As a result, GFP expression and fluorescence in the reporter cells correlates faithfully with the ES cell identity (5), and fluorescence-activated cell sorting (FACS) analysis can be used to closely monitor the self-renewal status of the cells at the single cell level (3,8). Coupled with RNAi, the Oct4GiP reporter assay can be used to quickly identify and study regulators of ES cell maintenance and self-renewal (3,8). Compared to other methods for assaying self-renewal, it is more convenient, sensitive, quantitative, and of lower cost. It can be carried out in 96- or 384-well plates for large-scale studies such as high-throughput screens or genetic epistasis analysis. Finally, by using other lineage-specific reporter ES cell lines, the assay we describe here can also be modified to study fate specification during ES cell differentiation.

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Year:  2012        PMID: 22688536      PMCID: PMC3468191          DOI: 10.3791/3987

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  19 in total

1.  Changing potency by spontaneous fusion.

Authors:  Qi-Long Ying; Jennifer Nichols; Edward P Evans; Austin G Smith
Journal:  Nature       Date:  2002-03-13       Impact factor: 49.962

2.  Defined conditions for neural commitment and differentiation.

Authors:  Qi-Long Ying; Austin G Smith
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

3.  Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells.

Authors:  Ian Chambers; Douglas Colby; Morag Robertson; Jennifer Nichols; Sonia Lee; Susan Tweedie; Austin Smith
Journal:  Cell       Date:  2003-05-30       Impact factor: 41.582

4.  Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution.

Authors:  Nimet Maherali; Rupa Sridharan; Wei Xie; Jochen Utikal; Sarah Eminli; Katrin Arnold; Matthias Stadtfeld; Robin Yachechko; Jason Tchieu; Rudolf Jaenisch; Kathrin Plath; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2007-06-07       Impact factor: 24.633

5.  Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells.

Authors:  H Niwa; J Miyazaki; A G Smith
Journal:  Nat Genet       Date:  2000-04       Impact factor: 38.330

Review 6.  Control of the embryonic stem cell state.

Authors:  Richard A Young
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

7.  Isolation of embryonic stem (ES) cells in media supplemented with recombinant leukemia inhibitory factor (LIF).

Authors:  S Pease; P Braghetta; D Gearing; D Grail; R L Williams
Journal:  Dev Biol       Date:  1990-10       Impact factor: 3.582

8.  The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells.

Authors:  Kaoru Mitsui; Yoshimi Tokuzawa; Hiroaki Itoh; Kohichi Segawa; Mirei Murakami; Kazutoshi Takahashi; Masayoshi Maruyama; Mitsuyo Maeda; Shinya Yamanaka
Journal:  Cell       Date:  2003-05-30       Impact factor: 41.582

9.  An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity.

Authors:  Thomas G Fazzio; Jason T Huff; Barbara Panning
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

10.  A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal.

Authors:  Guang Hu; Jonghwan Kim; Qikai Xu; Yumei Leng; Stuart H Orkin; Stephen J Elledge
Journal:  Genes Dev       Date:  2009-04-01       Impact factor: 11.361

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  7 in total

1.  Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal.

Authors:  Brad Lackford; Chengguo Yao; Georgette M Charles; Lingjie Weng; Xiaofeng Zheng; Eun-A Choi; Xiaohui Xie; Ji Wan; Yi Xing; Johannes M Freudenberg; Pengyi Yang; Raja Jothi; Guang Hu; Yongsheng Shi
Journal:  EMBO J       Date:  2014-03-04       Impact factor: 11.598

2.  INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development.

Authors:  Li Wang; Ying Du; James M Ward; Takashi Shimbo; Brad Lackford; Xiaofeng Zheng; Yi-liang Miao; Bingying Zhou; Leng Han; David C Fargo; Raja Jothi; Carmen J Williams; Paul A Wade; Guang Hu
Journal:  Cell Stem Cell       Date:  2014-05-01       Impact factor: 24.633

3.  The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming.

Authors:  Li Wang; Yi-Liang Miao; Xiaofeng Zheng; Brad Lackford; Bingying Zhou; Leng Han; Chengguo Yao; James M Ward; Adam Burkholder; Inna Lipchina; David C Fargo; Konrad Hochedlinger; Yongsheng Shi; Carmen J Williams; Guang Hu
Journal:  Cell Stem Cell       Date:  2013-12-05       Impact factor: 24.633

4.  Telomere dysfunction cooperates with epigenetic alterations to impair murine embryonic stem cell fate commitment.

Authors:  Aditi Qamra; Tsz Wai Chu; Mélanie Criqui; Monika Sharma; Julissa Tsao; Danielle A Henry; Dalia Barsyte-Lovejoy; Cheryl H Arrowsmith; Neil Winegarden; Mathieu Lupien; Lea Harrington
Journal:  Elife       Date:  2020-04-16       Impact factor: 8.140

5.  Use of genome-wide RNAi screens to identify regulators of embryonic stem cell pluripotency and self-renewal.

Authors:  Xiaofeng Zheng; Guang Hu
Journal:  Methods Mol Biol       Date:  2014

6.  CNOT3-Dependent mRNA Deadenylation Safeguards the Pluripotent State.

Authors:  Xiaofeng Zheng; Pengyi Yang; Brad Lackford; Brian D Bennett; Li Wang; Hui Li; Yu Wang; Yiliang Miao; Julie F Foley; David C Fargo; Ying Jin; Carmen J Williams; Raja Jothi; Guang Hu
Journal:  Stem Cell Reports       Date:  2016-10-13       Impact factor: 7.765

7.  Embryonic Environmental Niche Reprograms Somatic Cells to Express Pluripotency Markers and Participate in Adult Chimaeras.

Authors:  Krystyna Żyżyńska-Galeńska; Agnieszka Bernat; Anna Piliszek; Jolanta Karasiewicz; Ewa Szablisty; Mariusz Sacharczuk; Marta Brewińska-Olchowik; Michał Bochenek; Joanna Grabarek; Jacek Andrzej Modliński
Journal:  Cells       Date:  2021-02-25       Impact factor: 6.600

  7 in total

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