Literature DB >> 22688353

In situ hybridization in human and rodent tissue by the use of a new and simplified method.

Øystein Sørdal1, Gunnar Qvigstad, Ivar Skjåk Nordrum, Bjørn Gustafsson, Helge L Waldum.   

Abstract

In situ hybridization (ISH) is a method that detects and localizes DNA or RNA in morphologically preserved tissue and cell preparations. The method is based on the principle that DNA or RNA will undergo hydrogen binding to complimentary sequences. Selective probes are labeled and used in order to detect specific sequences in tissues or cell preparations. Even though the method has improved over the past decades, there are still issues with sensitivity and specificity. The protocols are nonstandardized, and often time consuming due to multiple steps. In this paper, we have used a new and commercially available ISH kit for the detection of mRNA in formalin-fixed paraffin-embedded tissue. We have used both human and Mongolian gerbil tissue, and we evaluated mRNA expression of the neuroendocrine markers chromogranin A and histidine decarboxylase in both normal tissue and poorly differentiated tumor. In our experience, this method offers excellent sensitivity and specificity. The protocol is more standardized, and our results have been consistent. It is also less time consuming than conventional ISH protocols.

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Year:  2013        PMID: 22688353     DOI: 10.1097/PAI.0b013e31825a0048

Source DB:  PubMed          Journal:  Appl Immunohistochem Mol Morphol        ISSN: 1533-4058


  6 in total

Review 1.  Gastrin May Mediate the Carcinogenic Effect of Helicobacter pylori Infection of the Stomach.

Authors:  Helge L Waldum; Øyvind Hauso; Øystein F Sørdal; Reidar Fossmark
Journal:  Dig Dis Sci       Date:  2014-12-06       Impact factor: 3.199

2.  Simultaneous visualization and cell-specific confirmation of RNA and protein in the mouse retina.

Authors:  Andrew J Stempel; Catherine W Morgans; J Timothy Stout; Binoy Appukuttan
Journal:  Mol Vis       Date:  2014-09-21       Impact factor: 2.367

3.  Cellular localization of guanylin and uroguanylin mRNAs in human and rat duodenal and colonic mucosa.

Authors:  Øystein Brenna; Marianne W Furnes; Bjørn Munkvold; Mark Kidd; Arne K Sandvik; Björn I Gustafsson
Journal:  Cell Tissue Res       Date:  2016-04-05       Impact factor: 5.249

4.  Glial- and Neuronal-Specific Expression of CCL5 mRNA in the Rat Brain.

Authors:  Maria Fe Lanfranco; Italo Mocchetti; Mark P Burns; Sonia Villapol
Journal:  Front Neuroanat       Date:  2018-01-12       Impact factor: 3.856

5.  RNA In Situ Hybridization for Detecting Gene Expression Patterns in the Abdomens and Wings of Drosophila Species.

Authors:  Mujeeb Shittu; Tessa Steenwinkel; William Dion; Nathan Ostlund; Komal Raja; Thomas Werner
Journal:  Methods Protoc       Date:  2021-03-10

Review 6.  Time to Classify Tumours of the Stomach and the Kidneys According to Cell of Origin.

Authors:  Helge Waldum; Patricia Mjønes
Journal:  Int J Mol Sci       Date:  2021-12-13       Impact factor: 5.923

  6 in total

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