Literature DB >> 22686208

Metabolomics as a key integrator for "omic" advancement of personalized medicine and future therapies.

Andrea D Eckhart1, Kirk Beebe, Mike Milburn.   

Abstract

Investigation into biological complexity, whether for a better understanding of disease or drug process, is a monumental task plaguing investigators. The lure of "omic" technologies for circumventing much of these challenges has led to widespread efforts and adoption. It is becoming clearer that a single "omic" approach (e.g., genomics) is often insufficient for completely defining the complexity in these biological systems. Hence, there is an increasing awareness that a "systems" approach will serve to increase resolution and confidence and provide a strong foundation for further hypothesis-driven investigation. Although certain metabolites are already considered clinically important, the profiling of metabolites via metabolomics (the profiling of metabolites to fully characterize metabolic pathways) is the most recent to mature of these "omic" technologies and has been only recently adopted as compared to genomic or proteomic approaches in systems inquiries. Recent reports suggest that this "omic" may well be a key data stream in systems investigations for endeavors in personalized medicine and biomarker identification, as it seems most closely relevant to the phenotype.
© 2012 Wiley Periodicals, Inc.

Mesh:

Year:  2012        PMID: 22686208      PMCID: PMC5439875          DOI: 10.1111/j.1752-8062.2011.00388.x

Source DB:  PubMed          Journal:  Clin Transl Sci        ISSN: 1752-8054            Impact factor:   4.689


  31 in total

1.  Detrimental effects of adenosine signaling in sickle cell disease.

Authors:  Yujin Zhang; Yingbo Dai; Jiaming Wen; Weiru Zhang; Almut Grenz; Hong Sun; Lijian Tao; Guangxiu Lu; Danny C Alexander; Michael V Milburn; Louvenia Carter-Dawson; Dorothy E Lewis; Wenzheng Zhang; Holger K Eltzschig; Rodney E Kellems; Michael R Blackburn; Harinder S Juneja; Yang Xia
Journal:  Nat Med       Date:  2010-12-19       Impact factor: 53.440

Review 2.  Clinical practice. Management of an inherited predisposition to breast cancer.

Authors:  Mark Robson; Kenneth Offit
Journal:  N Engl J Med       Date:  2007-07-12       Impact factor: 91.245

3.  Diagnostics: The prostate-cancer metabolome.

Authors:  Cory Abate-Shen; Michael M Shen
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

Review 4.  Pathophysiology and therapy for haemoglobinopathies. Part II: thalassaemias.

Authors:  Fabrizia Urbinati; Catherine Madigan; Punam Malik
Journal:  Expert Rev Mol Med       Date:  2006-05-09       Impact factor: 5.600

5.  Metabolomics analysis reveals elevation of 3-indoxyl sulfate in plasma and brain during chemically-induced acute kidney injury in mice: investigation of nicotinic acid receptor agonists.

Authors:  Joanna R Zgoda-Pols; Swapan Chowdhury; Mark Wirth; Michael V Milburn; Danny C Alexander; Kevin B Alton
Journal:  Toxicol Appl Pharmacol       Date:  2011-05-27       Impact factor: 4.219

Review 6.  KRAS, BRAF, PIK3CA, and PTEN mutations: implications for targeted therapies in metastatic colorectal cancer.

Authors:  Wendy De Roock; Veerle De Vriendt; Nicola Normanno; Fortunato Ciardiello; Sabine Tejpar
Journal:  Lancet Oncol       Date:  2010-12-14       Impact factor: 41.316

7.  Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression.

Authors:  Arun Sreekumar; Laila M Poisson; Thekkelnaycke M Rajendiran; Amjad P Khan; Qi Cao; Jindan Yu; Bharathi Laxman; Rohit Mehra; Robert J Lonigro; Yong Li; Mukesh K Nyati; Aarif Ahsan; Shanker Kalyana-Sundaram; Bo Han; Xuhong Cao; Jaeman Byun; Gilbert S Omenn; Debashis Ghosh; Subramaniam Pennathur; Danny C Alexander; Alvin Berger; Jeffrey R Shuster; John T Wei; Sooryanarayana Varambally; Christopher Beecher; Arul M Chinnaiyan
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

8.  Cancer-associated IDH1 mutations produce 2-hydroxyglutarate.

Authors:  Lenny Dang; David W White; Stefan Gross; Bryson D Bennett; Mark A Bittinger; Edward M Driggers; Valeria R Fantin; Hyun Gyung Jang; Shengfang Jin; Marie C Keenan; Kevin M Marks; Robert M Prins; Patrick S Ward; Katharine E Yen; Linda M Liau; Joshua D Rabinowitz; Lewis C Cantley; Craig B Thompson; Matthew G Vander Heiden; Shinsan M Su
Journal:  Nature       Date:  2009-12-10       Impact factor: 49.962

9.  Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.

Authors:  Christian Gieger; Ludwig Geistlinger; Elisabeth Altmaier; Martin Hrabé de Angelis; Florian Kronenberg; Thomas Meitinger; Hans-Werner Mewes; H-Erich Wichmann; Klaus M Weinberger; Jerzy Adamski; Thomas Illig; Karsten Suhre
Journal:  PLoS Genet       Date:  2008-11-28       Impact factor: 5.917

10.  Metabolomics: moving towards personalized medicine.

Authors:  Eugenio Baraldi; Silvia Carraro; Giuseppe Giordano; Fabiano Reniero; Giorgio Perilongo; Franco Zacchello
Journal:  Ital J Pediatr       Date:  2009-10-23       Impact factor: 2.638

View more
  19 in total

1.  A novel fasting blood test for insulin resistance and prediabetes.

Authors:  Jeff Cobb; Walter Gall; Klaus-Peter Adam; Pamela Nakhle; Eric Button; James Hathorn; Kay Lawton; Michael Milburn; Regis Perichon; Matthew Mitchell; Andrea Natali; Ele Ferrannini
Journal:  J Diabetes Sci Technol       Date:  2013-01-01

Review 2.  Understanding the apothecaries within: the necessity of a systematic approach for defining the chemical output of the human microbiome.

Authors:  Kirk Beebe; Brante Sampey; Steven M Watkins; Michael Milburn; Andrea D Eckhart
Journal:  Clin Transl Sci       Date:  2014-01-14       Impact factor: 4.689

3.  Choline kinase inhibition in rheumatoid arthritis.

Authors:  M Guma; E Sanchez-Lopez; A Lodi; R Garcia-Carbonell; S Tiziani; M Karin; J C Lacal; G S Firestein
Journal:  Ann Rheum Dis       Date:  2014-10-01       Impact factor: 19.103

4.  Serum metabolic signatures of primary biliary cirrhosis and primary sclerosing cholangitis.

Authors:  Lauren N Bell; Jacob Wulff; Megan Comerford; Raj Vuppalanchi; Naga Chalasani
Journal:  Liver Int       Date:  2014-09-22       Impact factor: 5.828

5.  Critical Role of Glucose Metabolism in Rheumatoid Arthritis Fibroblast-like Synoviocytes.

Authors:  Ricard Garcia-Carbonell; Ajit S Divakaruni; Alessia Lodi; Ildefonso Vicente-Suarez; Arindam Saha; Hilde Cheroutre; Gerry R Boss; Stefano Tiziani; Anne N Murphy; Monica Guma
Journal:  Arthritis Rheumatol       Date:  2016-07       Impact factor: 10.995

6.  A review of applications of metabolomics in cancer.

Authors:  Richard D Beger
Journal:  Metabolites       Date:  2013-07-05

7.  Metabolomics in psoriatic disease: pilot study reveals metabolite differences in psoriasis and psoriatic arthritis.

Authors:  April W Armstrong; Julie Wu; Mary Ann Johnson; Dmitry Grapov; Baktazh Azizi; Jaskaran Dhillon; Oliver Fiehn
Journal:  F1000Res       Date:  2014-10-21

8.  Metabolomics profiling of pre-and post-anesthesia plasma samples of colorectal patients obtained via Ficoll separation.

Authors:  Veronica Ghini; Florian T Unger; Leonardo Tenori; Paola Turano; Hartmut Juhl; Kerstin A David
Journal:  Metabolomics       Date:  2015-07-25       Impact factor: 4.290

9.  COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access.

Authors:  Reza M Salek; Steffen Neumann; Daniel Schober; Jan Hummel; Kenny Billiau; Joachim Kopka; Elon Correa; Theo Reijmers; Antonio Rosato; Leonardo Tenori; Paola Turano; Silvia Marin; Catherine Deborde; Daniel Jacob; Dominique Rolin; Benjamin Dartigues; Pablo Conesa; Kenneth Haug; Philippe Rocca-Serra; Steve O'Hagan; Jie Hao; Michael van Vliet; Marko Sysi-Aho; Christian Ludwig; Jildau Bouwman; Marta Cascante; Timothy Ebbels; Julian L Griffin; Annick Moing; Macha Nikolski; Matej Oresic; Susanna-Assunta Sansone; Mark R Viant; Royston Goodacre; Ulrich L Günther; Thomas Hankemeier; Claudio Luchinat; Dirk Walther; Christoph Steinbeck
Journal:  Metabolomics       Date:  2015-05-26       Impact factor: 4.290

10.  Metabolomics and its Application to the Development of Clinical Laboratory Tests for Prostate Cancer.

Authors:  Jonathan E McDunn; Steven M Stirdivant; Lisa A Ford; Robert L Wolfert
Journal:  EJIFCC       Date:  2015-03-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.