Literature DB >> 22685288

Synthesis of long-chain chitooligosaccharides by a hypertransglycosylating processive endochitinase of Serratia proteamaculans 568.

Pallinti Purushotham1, Appa Rao Podile.   

Abstract

We describe the heterologous expression and characterization of a 407-residue single-domain glycosyl hydrolase family 18 chitinase (SpChiD) from Gram-negative Serratia proteamaculans 568 that has unprecedented catalytic properties. SpChiD was optimally active at pH 6.0 and 40 °C, where it showed a K(m) of 83 mg ml(-1), a k(cat) of 3.9 × 10(2) h(-1), and a k(cat)/K(m) of 4.7 h mg(-1) ml(-1) on colloidal chitin. On chitobiose, the K(m), k(cat), and k(cat)/K(m) were 203 μM, 1.3 × 10(2) h(-1), and 0.62 h(-1) μM(-1), respectively. Hydrolytic activity on chitooligosaccharides (CHOS) and colloidal chitin indicated that SpChiD was an endo-acting processive enzyme, with the unique ability to convert released chitobiose to N-acetylglucosamine, the major end product. SpChiD showed hyper transglycosylation (TG) with trimer-hexamer CHOS substrates, generating considerable amounts of long-chain CHOS. The TG activity of SpChiD was dependent on both the length and concentration of the oligomeric substrate and also on the enzyme concentration. The length and amount of accumulated TG products increased with increases in the length of the substrate and its concentration and decreased with increases in the enzyme concentration. The SpChiD bound to insoluble and soluble chitin substrates despite the absence of accessory domains. Sequence alignments and structural modeling indicated that SpChiD would have a deep substrate-binding groove lined with aromatic residues, which is characteristic of processive enzymes. SpChiD shows a combination of properties that seems rare among family 18 chitinases and that may resemble the properties of human chitotriosidase.

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Year:  2012        PMID: 22685288      PMCID: PMC3416260          DOI: 10.1128/JB.06473-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  46 in total

1.  Structure of a two-domain chitotriosidase from Serratia marcescens at 1.9-A resolution.

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Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

2.  Structural insights into the catalytic mechanism of a family 18 exo-chitinase.

Authors:  D M van Aalten; D Komander; B Synstad; S Gåseidnes; M G Peter; V G Eijsink
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

3.  The chitinase system of a strain of Streptomyces griseus.

Authors:  L R BERGER; D M REYNOLDS
Journal:  Biochim Biophys Acta       Date:  1958-09

4.  Endo/exo mechanism and processivity of family 18 chitinases produced by Serratia marcescens.

Authors:  Svein J Horn; Audun Sørbotten; Bjørnar Synstad; Pawel Sikorski; Morten Sørlie; Kjell M Vårum; Vincent G H Eijsink
Journal:  FEBS J       Date:  2006-02       Impact factor: 5.542

5.  The non-catalytic chitin-binding protein CBP21 from Serratia marcescens is essential for chitin degradation.

Authors:  Gustav Vaaje-Kolstad; Svein J Horn; Daan M F van Aalten; Bjørnar Synstad; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2005-06-01       Impact factor: 5.157

6.  Roles of the exposed aromatic residues in crystalline chitin hydrolysis by chitinase A from Serratia marcescens 2170.

Authors:  T Uchiyama; F Katouno; N Nikaidou; T Nonaka; J Sugiyama; T Watanabe
Journal:  J Biol Chem       Date:  2001-08-24       Impact factor: 5.157

7.  Enzymatic properties of wild-type and active site mutants of chitinase A from Vibrio carchariae, as revealed by HPLC-MS.

Authors:  Wipa Suginta; Archara Vongsuwan; Chomphunuch Songsiriritthigul; Jisnuson Svasti; Heino Prinz
Journal:  FEBS J       Date:  2005-07       Impact factor: 5.542

8.  Purification and characterization of two antifungal chitinases extracellularly produced by Bacillus amyloliquefaciens V656 in a shrimp and crab shell powder medium.

Authors:  San-Lang Wang; Ing-Lung Shih; Tze-Wun Liang; Chi-Hau Wang
Journal:  J Agric Food Chem       Date:  2002-04-10       Impact factor: 5.279

9.  High-level expression and characterization of two chitinases, ChiCH and ChiCW, of Bacillus cereus 28-9 in Escherichia coli.

Authors:  Chien-Jui Huang; Chao-Ying Chen
Journal:  Biochem Biophys Res Commun       Date:  2005-02-04       Impact factor: 3.575

10.  Roles of four chitinases (chia, chib, chic, and chid) in the chitin degradation system of marine bacterium Alteromonas sp. strain O-7.

Authors:  Hideyuki Orikoshi; Shigenari Nakayama; Katsushiro Miyamoto; Chiaki Hanato; Masahide Yasuda; Yoshihiko Inamori; Hiroshi Tsujibo
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

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  15 in total

Review 1.  Endoglycosidases for the Synthesis of Polysaccharides and Glycoconjugates.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Adv Carbohydr Chem Biochem       Date:  2016-08-23       Impact factor: 12.200

2.  Transglycosylation by chitinase D from Serratia proteamaculans improved through altered substrate interactions.

Authors:  Jogi Madhuprakash; Karunakar Tanneeru; Pallinti Purushotham; Lalitha Guruprasad; Appa Rao Podile
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

3.  Amino Groups of Chitosan Are Crucial for Binding to a Family 32 Carbohydrate Binding Module of a Chitosanase from Paenibacillus elgii.

Authors:  Subha Narayan Das; Martin Wagenknecht; Pavan Kumar Nareddy; Bhoopal Bhuvanachandra; Ramana Niddana; Rengarajan Balamurugan; Musti J Swamy; Bruno M Moerschbacher; Appa Rao Podile
Journal:  J Biol Chem       Date:  2016-07-12       Impact factor: 5.157

4.  Structure of chitinase D from Serratia proteamaculans reveals the structural basis of its dual action of hydrolysis and transglycosylation.

Authors:  Jogi Madhuprakash; Avinash Singh; Sanjit Kumar; Mau Sinha; Punit Kaur; Sujata Sharma; Appa R Podile; Tej P Singh
Journal:  Int J Biochem Mol Biol       Date:  2013-12-15

5.  Antifungal performance of extracellular chitinases and culture supernatants of Streptomyces galilaeus CFFSUR-B12 against Mycosphaerella fijiensis Morelet.

Authors:  Benjamín Moreno Castillo; Michael F Dunn; Karina Guillén Navarro; Francisco Holguín Meléndez; Magdalena Hernández Ortiz; Sergio Encarnación Guevara; Graciela Huerta Palacios
Journal:  World J Microbiol Biotechnol       Date:  2016-02-12       Impact factor: 3.312

6.  Characterization of the Pseudomonas aeruginosa Glycoside Hydrolase PslG Reveals That Its Levels Are Critical for Psl Polysaccharide Biosynthesis and Biofilm Formation.

Authors:  Perrin Baker; Gregory B Whitfield; Preston J Hill; Dustin J Little; Matthew J Pestrak; Howard Robinson; Daniel J Wozniak; P Lynne Howell
Journal:  J Biol Chem       Date:  2015-09-30       Impact factor: 5.157

7.  Catalytic efficiency of chitinase-D on insoluble chitinous substrates was improved by fusing auxiliary domains.

Authors:  Jogi Madhuprakash; Nour Eddine El Gueddari; Bruno M Moerschbacher; Appa Rao Podile
Journal:  PLoS One       Date:  2015-01-23       Impact factor: 3.240

8.  Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides.

Authors:  Mohan Krishna Mallakuntla; Papa Rao Vaikuntapu; Bhoopal Bhuvanachandra; Subha Narayan Das; Appa Rao Podile
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

9.  Molecular characterization of a novel chitinase CmChi1 from Chitinolyticbacter meiyuanensis SYBC-H1 and its use in N-acetyl-d-glucosamine production.

Authors:  Alei Zhang; Yumei He; Guoguang Wei; Jie Zhou; Weiliang Dong; Kequan Chen; Pingkai Ouyang
Journal:  Biotechnol Biofuels       Date:  2018-06-26       Impact factor: 6.040

10.  Inverse relationship between chitobiase and transglycosylation activities of chitinase-D from Serratia proteamaculans revealed by mutational and biophysical analyses.

Authors:  Jogi Madhuprakash; Kishore Babu Bobbili; Bruno M Moerschbacher; Tej Pal Singh; Musti J Swamy; Appa Rao Podile
Journal:  Sci Rep       Date:  2015-10-23       Impact factor: 4.379

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