Literature DB >> 22677224

Improved diagnosis of spring viremia of carp by nested reverse-transcription PCR: development of a chimeric positive control for prevention of false-positive diagnosis.

Hyoung Jun Kim1.   

Abstract

Polymerase chain reaction (PCR) assays allow for the rapid and accurate detection of infectious agents through identification of nucleic acid sequences. However, contamination of samples with positive DNA can lead to false-positive results. In this study, positive control plasmids were developed to minimize false-positive reactions due to PCR contamination during detection of SVCV by semi-nested reverse-transcription PCR. An ampicillin resistance gene was truncated by PCR amplification, and the fragments were inserted into pGEM-T Easy vectors; the resulting plasmids were named SVCV chimeric plasmid-1 and chimeric plasmid-2, respectively. Through a series of semi-nested PCRs, the use of SVCV chimeric plasmids-1 and -2 was shown to ensure correct diagnoses, free from PCR contamination. The results of this study show that PCR positive controls can be created without use of viral nucleic acids or pathogen-infected tissues. The technique can be applied to quarantined material and can be used to detect other pathogens.
Copyright © 2012 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22677224     DOI: 10.1016/j.jviromet.2012.05.027

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  2 in total

1.  Development of a rapid method for identifying carryover contamination of positive control DNA, using a chimeric positive control and restriction enzyme for the diagnosis of white spot syndrome virus by nested PCR.

Authors:  Hyoung Jun Kim; Se Ryun Kwon
Journal:  Indian J Microbiol       Date:  2014-06-18       Impact factor: 2.461

2.  Primary clear cell sarcoma of the femur: a unique case with RT-PCR and direct sequencing confirmation of EWSR1/ATF1 fusion gene.

Authors:  Yuta Kubota; Kazuhiro Tanaka; Masanori Hisaoka; Tsutomu Daa; Tatsuya Iwasaki; Masanori Kawano; Ichiro Itonaga; Hiroshi Tsumura
Journal:  BMC Musculoskelet Disord       Date:  2021-01-21       Impact factor: 2.362

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.