Literature DB >> 22671972

Redox proteomics.

D Allan Butterfield, Isabella Dalle-Donne.   

Abstract

Proteins are major targets of reactive oxygen and nitrogen species (ROS/RNS) and numerous post-translational, reversible or irreversible modifications have been characterized, which may lead to a change in the structure and/or function of the oxidized protein. Redox proteomics is an increasingly emerging branch of proteomics aimed at identifying and quantifying redox-based changes within the proteome both in redox signaling and under oxidative stress conditions. Correlation between protein oxidation and human disease is widely accepted, although elucidating cause and effect remains a challenge. Increasing biomedical data have provided compelling evidences for the involvement of perturbations in redox homeostasis in a large number of pathophysiological conditions and aging. Research toward a better understanding of the molecular mechanisms of a disease together with identification of specific targets of oxidative damage is urgently required. This is the power and potential of redox proteomics. In the last few years, combined proteomics, mass spectrometry (MS), and affinity chemistry-based methodologies have contributed in a significant way to provide a better understanding of protein oxidative modifications occurring in various biological specimens under different physiological and pathological conditions. Hence, this Forum on Redox Proteomics is timely. Original and review articles are presented on various subjects ranging from redox proteomics studies of oxidatively modified brain proteins in Alzheimer disease and animal models of Alzheimer and Parkinson disease, to potential new biomarker discovery paradigm for human disease, to chronic kidney disease, to protein nitration in aging and age-related neurodegenerative disorders, electrophile-responsive proteomes of special relevance to diseases involving mitochondrial alterations, to cardiovascular physiology and pathology.

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Year:  2012        PMID: 22671972      PMCID: PMC3448936          DOI: 10.1089/ars.2012.4742

Source DB:  PubMed          Journal:  Antioxid Redox Signal        ISSN: 1523-0864            Impact factor:   8.401


  8 in total

Review 1.  Redox proteomics identification of oxidatively modified brain proteins in Alzheimer's disease and mild cognitive impairment: insights into the progression of this dementing disorder.

Authors:  D Allan Butterfield; Rukhsana Sultana
Journal:  J Alzheimers Dis       Date:  2007-08       Impact factor: 4.472

Review 2.  Oxidative stress and human diseases: Origin, link, measurement, mechanisms, and biomarkers.

Authors:  Daniela Giustarini; Isabella Dalle-Donne; Dimitrios Tsikas; Ranieri Rossi
Journal:  Crit Rev Clin Lab Sci       Date:  2009       Impact factor: 6.250

Review 3.  Redox proteomics in selected neurodegenerative disorders: from its infancy to future applications.

Authors:  D Allan Butterfield; Marzia Perluigi; Tanea Reed; Tasneem Muharib; Christopher P Hughes; Renã A S Robinson; Rukhsana Sultana
Journal:  Antioxid Redox Signal       Date:  2012-01-18       Impact factor: 8.401

4.  Identification of the oxidative stress proteome in the brain.

Authors:  Rukhsana Sultana; D Allan Butterfield
Journal:  Free Radic Biol Med       Date:  2010-11-25       Impact factor: 7.376

Review 5.  Proteins as biomarkers of oxidative/nitrosative stress in diseases: the contribution of redox proteomics.

Authors:  Isabella Dalle-Donne; Andrea Scaloni; Daniela Giustarini; Eleonora Cavarra; Gianluca Tell; Giuseppe Lungarella; Roberto Colombo; Ranieri Rossi; Aldo Milzani
Journal:  Mass Spectrom Rev       Date:  2005 Jan-Feb       Impact factor: 10.946

Review 6.  Protein S-glutathionylation: a regulatory device from bacteria to humans.

Authors:  Isabella Dalle-Donne; Ranieri Rossi; Graziano Colombo; Daniela Giustarini; Aldo Milzani
Journal:  Trends Biochem Sci       Date:  2009-01-08       Impact factor: 13.807

Review 7.  Roles of amyloid beta-peptide-associated oxidative stress and brain protein modifications in the pathogenesis of Alzheimer's disease and mild cognitive impairment.

Authors:  D Allan Butterfield; Tanea Reed; Shelley F Newman; Rukhsana Sultana
Journal:  Free Radic Biol Med       Date:  2007-06-13       Impact factor: 7.376

8.  Redox proteomics identification of oxidatively modified hippocampal proteins in mild cognitive impairment: insights into the development of Alzheimer's disease.

Authors:  D Allan Butterfield; H Fai Poon; Daret St Clair; Jeffery N Keller; William M Pierce; Jon B Klein; William R Markesbery
Journal:  Neurobiol Dis       Date:  2006-02-08       Impact factor: 5.996

  8 in total
  19 in total

Review 1.  Carbonyl stress in aging process: role of vitamins and phytochemicals as redox regulators.

Authors:  Volkan Ergin; Reza Ebrahimi Hariry; Cimen Karasu
Journal:  Aging Dis       Date:  2013-10-01       Impact factor: 6.745

Review 2.  Abeta, oxidative stress in Alzheimer disease: evidence based on proteomics studies.

Authors:  Aaron M Swomley; Sarah Förster; Jierel T Keeney; Judy Triplett; Zhaoshu Zhang; Rukhsana Sultana; D Allan Butterfield
Journal:  Biochim Biophys Acta       Date:  2013-10-09

Review 3.  New molecular insights in diabetic nephropathy.

Authors:  Ionel Alexandru Checheriţă; Gina Manda; Mihai Eugen Hinescu; Ileana Peride; Andrei Niculae; Ştefana Bîlha; Angelica Grămăticu; Luminiţa Voroneanu; Adrian Covic
Journal:  Int Urol Nephrol       Date:  2016-01-12       Impact factor: 2.370

Review 4.  Antimicrobial strategies centered around reactive oxygen species--bactericidal antibiotics, photodynamic therapy, and beyond.

Authors:  Fatma Vatansever; Wanessa C M A de Melo; Pinar Avci; Daniela Vecchio; Magesh Sadasivam; Asheesh Gupta; Rakkiyappan Chandran; Mahdi Karimi; Nivaldo A Parizotto; Rui Yin; George P Tegos; Michael R Hamblin
Journal:  FEMS Microbiol Rev       Date:  2013-07-25       Impact factor: 16.408

Review 5.  Calcium's role as nuanced modulator of cellular physiology in the brain.

Authors:  Hilaree N Frazier; Shaniya Maimaiti; Katie L Anderson; Lawrence D Brewer; John C Gant; Nada M Porter; Olivier Thibault
Journal:  Biochem Biophys Res Commun       Date:  2016-08-20       Impact factor: 3.575

Review 6.  A decade of proteomics studies of glaucomatous neurodegeneration.

Authors:  Gülgün Tezel
Journal:  Proteomics Clin Appl       Date:  2014-02-16       Impact factor: 3.494

Review 7.  Apolipoprotein A-I: insights from redox proteomics for its role in neurodegeneration.

Authors:  Jeriel T R Keeney; Aaron M Swomley; Sarah Förster; Jessica L Harris; Rukhsana Sultana; D Allan Butterfield
Journal:  Proteomics Clin Appl       Date:  2013-01       Impact factor: 3.494

8.  Data-independent-acquisition mass spectrometry for identification of targeted-peptide site-specific modifications.

Authors:  Caleb J Porter; Michael S Bereman
Journal:  Anal Bioanal Chem       Date:  2015-06-24       Impact factor: 4.142

9.  Comparative informatics analysis to evaluate site-specific protein oxidation in multidimensional LC-MS/MS data.

Authors:  Carlee S McClintock; Jerry M Parks; Marshall Bern; Pavan K Ghattyvenkatakrishna; Robert L Hettich
Journal:  J Proteome Res       Date:  2013-06-19       Impact factor: 4.466

Review 10.  New insight into neurodegeneration: the role of proteomics.

Authors:  Ramavati Pal; Guido Alves; Jan Petter Larsen; Simon Geir Møller
Journal:  Mol Neurobiol       Date:  2013-12-10       Impact factor: 5.590

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