Literature DB >> 22671279

Ultrafast conformational dynamics of pyranine during excited state proton transfer in aqueous solution revealed by femtosecond stimulated Raman spectroscopy.

Weimin Liu1, Fangyuan Han, Connor Smith, Chong Fang.   

Abstract

Proton transfer reaction plays an essential role in a myriad of chemical and biological processes, and to reveal the choreography of the proton motion intra- and intermolecularly, a spectroscopic technique capable of capturing molecular structural snapshots on the intrinsic time scale of proton transfer motions is needed. The photoacid pyranine (8-hydroxypyrene-1,3,6-trisulfonic acid, HPTS) serves as a paradigm case to dissect excited state proton transfer (ESPT) events in aqueous solution, triggered precisely by photoexcitation. We have used femtosecond stimulated Raman spectroscopy (FSRS) to yield novel insights into the ultrafast conformational dynamics of photoexcited HPTS in complex with water and acetate molecules. Marker bands attributed to the deprotonated form of HPTS (1139 cm(-1), ∼220 fs rise) appear earlier and faster than the monomer acetic acid peak (864 cm(-1), ∼530 fs rise), indicating that water molecules actively participate in the ESPT chain. Several key low-frequency modes at 106, 150, 195, and 321 cm(-1) have been identified to facilitate ESPT at different stages from 300 fs, 1 ps, to 6 ps and beyond, having distinctive dynamics contributing through hydrogen bonds with 0, 1, and more intervening water molecules. The time-resolved FSRS spectroscopy renders a direct approach to observe the reactive coupling between the vibrational degrees of freedom of photoexcited HPTS in action, therefore revealing the anharmonicity matrix both within HPTS and between HPTS and the neighboring acceptor molecules. The observed excited state conformational dynamics are along the ESPT multidimensional reaction coordinate and are responsible for the photoacidity of HPTS in aqueous solution.

Entities:  

Year:  2012        PMID: 22671279     DOI: 10.1021/jp3020707

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  12 in total

1.  Excited-state structural dynamics of a dual-emission calmodulin-green fluorescent protein sensor for calcium ion imaging.

Authors:  Breland G Oscar; Weimin Liu; Yongxin Zhao; Longteng Tang; Yanli Wang; Robert E Campbell; Chong Fang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-01       Impact factor: 11.205

2.  Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase.

Authors:  Elizabeth M Santos; Wei Sheng; Rahele Esmatpour Salmani; Setare Tahmasebi Nick; Alireza Ghanbarpour; Hadi Gholami; Chrysoula Vasileiou; James H Geiger; Babak Borhan
Journal:  J Am Chem Soc       Date:  2021-09-13       Impact factor: 16.383

3.  Ultrafast transient absorption and solvation of a super-photoacid in acetoneous environments.

Authors:  Johannes Knorr; Niklas Sülzner; Bastian Geissler; Christian Spies; Alexander Grandjean; Roger Jan Kutta; Gregor Jung; Patrick Nuernberger
Journal:  Photochem Photobiol Sci       Date:  2022-09-30       Impact factor: 4.328

4.  Electrolytic synthesis of aqueous aluminum nanoclusters and in situ characterization by femtosecond Raman spectroscopy and computations.

Authors:  Wei Wang; Weimin Liu; I-Ya Chang; Lindsay A Wills; Lev N Zakharov; Shannon W Boettcher; Paul Ha-Yeon Cheong; Chong Fang; Douglas A Keszler
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

5.  Discovering a rotational barrier within a charge-transfer state of a photoexcited chromophore in solution.

Authors:  Taylor D Krueger; Sean A Boulanger; Liangdong Zhu; Longteng Tang; Chong Fang
Journal:  Struct Dyn       Date:  2020-03-04       Impact factor: 2.920

6.  An Engineered Biliverdin-Compatible Cyanobacteriochrome Enables a Unique Ultrafast Reversible Photoswitching Pathway.

Authors:  Sean R Tachibana; Longteng Tang; Liangdong Zhu; Yuka Takeda; Keiji Fushimi; Yoshibumi Ueda; Takahiro Nakajima; Yuto Kuwasaki; Moritoshi Sato; Rei Narikawa; Chong Fang
Journal:  Int J Mol Sci       Date:  2021-05-16       Impact factor: 5.923

7.  Panoramic portrait of primary molecular events preceding excited state proton transfer in water.

Authors:  Weimin Liu; Yanli Wang; Longteng Tang; Breland G Oscar; Liangdong Zhu; Chong Fang
Journal:  Chem Sci       Date:  2016-05-12       Impact factor: 9.825

8.  Excited State Structural Evolution of a GFP Single-Site Mutant Tracked by Tunable Femtosecond-Stimulated Raman Spectroscopy.

Authors:  Longteng Tang; Liangdong Zhu; Miles A Taylor; Yanli Wang; S James Remington; Chong Fang
Journal:  Molecules       Date:  2018-09-01       Impact factor: 4.411

9.  Modeling Excited-State Proton Transfer to Solvent: A Dynamics Study of a Super Photoacid with a Hybrid Implicit/Explicit Solvent Model.

Authors:  Umberto Raucci; Maria Gabriella Chiariello; Nadia Rega
Journal:  J Chem Theory Comput       Date:  2020-10-28       Impact factor: 6.006

10.  Time-Resolved Vibrational Analysis of Excited State Ab Initio Molecular Dynamics to Understand Photorelaxation: The Case of the Pyranine Photoacid in Aqueous Solution.

Authors:  Maria Gabriella Chiariello; Greta Donati; Nadia Rega
Journal:  J Chem Theory Comput       Date:  2020-10-02       Impact factor: 6.006

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