Literature DB >> 22665226

HLA typing by SSO and SSP methods.

Heather Dunckley1.   

Abstract

Human leukocyte antigen (HLA) typing, utilising the sequence-specific oligonucleotide (SSO) and sequence-specific primer (SSP) technologies, has been in routine use in many tissue typing laboratories worldwide for more than 20 years since the development of the polymerase chain reaction. Both methods are very useful for clinical and research purposes and can provide generic (low resolution) to allelic (high resolution) typing results. This chapter provides an overview of the SSO and SSP methods in relation to HLA typing.

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Year:  2012        PMID: 22665226     DOI: 10.1007/978-1-61779-842-9_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  Full screening and accurate subtyping of HLA-A*02 alleles through group-specific amplification and mono-allelic sequencing.

Authors:  Shengli Song; Miaomiao Han; Han Zhang; Yuanxia Wang; Hong Jiang
Journal:  Cell Mol Immunol       Date:  2013-08-19       Impact factor: 11.530

2.  HLA-DQ Mismatching: Mounting Evidence for a Role in Kidney Transplant Rejection.

Authors:  Nagaraju Sarabu; Donald E Hricik
Journal:  Clin J Am Soc Nephrol       Date:  2016-03-31       Impact factor: 8.237

3.  Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab.

Authors:  Nadeem Riaz; Jonathan J Havel; Vladimir Makarov; Alexis Desrichard; Walter J Urba; Jennifer S Sims; F Stephen Hodi; Salvador Martín-Algarra; Rajarsi Mandal; William H Sharfman; Shailender Bhatia; Wen-Jen Hwu; Thomas F Gajewski; Craig L Slingluff; Diego Chowell; Sviatoslav M Kendall; Han Chang; Rachna Shah; Fengshen Kuo; Luc G T Morris; John-William Sidhom; Jonathan P Schneck; Christine E Horak; Nils Weinhold; Timothy A Chan
Journal:  Cell       Date:  2017-10-12       Impact factor: 41.582

4.  Testing for drug hypersensitivity syndromes.

Authors:  Craig M Rive; Jack Bourke; Elizabeth J Phillips
Journal:  Clin Biochem Rev       Date:  2013-02

5.  HLA Haplotype Validator for quality assessments of HLA typing.

Authors:  Kazutoyo Osoegawa; Steven J Mack; Julia Udell; David A Noonan; Steven Ozanne; Elizabeth Trachtenberg; Matthew Prestegaard
Journal:  Hum Immunol       Date:  2015-11-10       Impact factor: 2.850

Review 6.  Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop.

Authors:  Kazutoyo Osoegawa; Tamara A Vayntrub; Sabine Wenda; Dianne De Santis; Konstantinos Barsakis; Milena Ivanova; Susan Hsu; Jonathan Barone; Rhonda Holdsworth; Mary Diviney; Medhat Askar; Amanda Willis; Dawn Railton; Sophie Laflin; Ketevan Gendzekhadze; Arisa Oki; Nicoletta Sacchi; Michela Mazzocco; Marco Andreani; Reem Ameen; Catherine Stavropoulos-Giokas; Amalia Dinou; Margareth Torres; Rodrigo Dos Santos Francisco; Carles Serra-Pages; Damian Goodridge; Sandra Balladares; Maria P Bettinotti; Brian Iglehart; Zahra Kashi; Russell Martin; Chee Loong Saw; Jiannis Ragoussis; Jonathan Downing; Cristina Navarrete; Winnie Chong; Katsuyuki Saito; Martin Petrek; Stana Tokic; Karin Padros; Ma Beatriz Rodriguez; Viktoria Zakharova; Olga Shragina; Susana R Marino; Nicholas K Brown; Takashi Shiina; Shingo Suzuki; Eric Spierings; Qiuheng Zhang; Yuxin Yin; Gerald P Morris; Ana Hernandez; Phillip Ruiz; Seik-Soon Khor; Katsushi Tokunaga; Aviva Geretz; Rasmi Thomas; Fumiko Yamamoto; Kalyan C Mallempati; Sridevi Gangavarapu; Uma Kanga; Shweta Tyagi; Steven G E Marsh; Will P Bultitude; Xiangjun Liu; Dajiang Cao; Maarten Penning; Carolyn K Hurley; Anne Cesbron; Claudia Mueller; Joannis Mytilineos; Eric T Weimer; Mats Bengtsson; Gottfried Fischer; John A Hansen; Chia-Jung Chang; Steven J Mack; Lisa E Creary; Marcelo A Fernandez-Viña
Journal:  Hum Immunol       Date:  2019-02-06       Impact factor: 2.850

7.  A glow of HLA typing in organ transplantation.

Authors:  Batool Mutar Mahdi
Journal:  Clin Transl Med       Date:  2013-02-23

8.  HLA class I (-A, -B, -C) and class II (-DR, -DQ) polymorphism in the Mauritanian population.

Authors:  Cheikh Tijani Hamed; Ghlana Meiloud; Fatimetou Veten; Mouna Hadrami; Sidi M Ghaber; Ely C Boussaty; Norddine Habti; Ahmed Houmeida
Journal:  BMC Med Genet       Date:  2018-01-03       Impact factor: 2.103

9.  An integrated tool to study MHC region: accurate SNV detection and HLA genes typing in human MHC region using targeted high-throughput sequencing.

Authors:  Hongzhi Cao; Jinghua Wu; Yu Wang; Hui Jiang; Tao Zhang; Xiao Liu; Yinyin Xu; Dequan Liang; Peng Gao; Yepeng Sun; Benjamin Gifford; Mark D'Ascenzo; Xiaomin Liu; Laurent C A M Tellier; Fang Yang; Xin Tong; Dan Chen; Jing Zheng; Weiyang Li; Todd Richmond; Xun Xu; Jun Wang; Yingrui Li
Journal:  PLoS One       Date:  2013-07-24       Impact factor: 3.240

10.  Exome Sequencing and Prediction of Long-Term Kidney Allograft Function.

Authors:  Laurent Mesnard; Thangamani Muthukumar; Maren Burbach; Carol Li; Huimin Shang; Darshana Dadhania; John R Lee; Vijay K Sharma; Jenny Xiang; Caroline Suberbielle; Maryvonnick Carmagnat; Nacera Ouali; Eric Rondeau; John J Friedewald; Michael M Abecassis; Manikkam Suthanthiran; Fabien Campagne
Journal:  PLoS Comput Biol       Date:  2016-09-29       Impact factor: 4.475

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