Literature DB >> 22655688

Neuronal regulation of pre-mRNA splicing by polypyrimidine tract binding proteins, PTBP1 and PTBP2.

Niroshika Keppetipola1, Shalini Sharma, Qin Li, Douglas L Black.   

Abstract

Alternative splicing patterns are regulated by RNA binding proteins that assemble onto each pre-mRNA to form a complex RNP structure. The polypyrimidine tract binding protein, PTB, has served as an informative model for understanding how RNA binding proteins affect spliceosome assembly and how changes in the expression of these proteins can control complex programs of splicing in tissues. In this review, we describe the mechanisms of splicing regulation by PTB and its function, along with its paralog PTBP2, in neuronal development.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22655688      PMCID: PMC3422667          DOI: 10.3109/10409238.2012.691456

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  162 in total

Review 1.  Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells.

Authors:  Fabrice Lejeune; Lynne E Maquat
Journal:  Curr Opin Cell Biol       Date:  2005-06       Impact factor: 8.382

2.  Identification, purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor.

Authors:  P D Zamore; M R Green
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

Review 3.  Functional consequences of developmentally regulated alternative splicing.

Authors:  Auinash Kalsotra; Thomas A Cooper
Journal:  Nat Rev Genet       Date:  2011-09-16       Impact factor: 53.242

Review 4.  Pre-mRNA splicing during transcription in the mammalian system.

Authors:  Amy Pandya-Jones
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-05-02       Impact factor: 9.957

5.  Regulation of alternative splicing by the core spliceosomal machinery.

Authors:  Arneet L Saltzman; Qun Pan; Benjamin J Blencowe
Journal:  Genes Dev       Date:  2011-02-15       Impact factor: 11.361

6.  Polypyrimidine tract-binding protein is critical for the turnover and subcellular distribution of CD40 ligand mRNA in CD4+ T cells.

Authors:  Rodrigo Matus-Nicodemos; Stefano Vavassori; Moraima Castro-Faix; Anibal Valentin-Acevedo; Karnail Singh; Valentina Marcelli; Lori R Covey
Journal:  J Immunol       Date:  2011-01-17       Impact factor: 5.422

7.  Hypoxia may increase rat insulin mRNA levels by promoting binding of the polypyrimidine tract-binding protein (PTB) to the pyrimidine-rich insulin mRNA 3'-untranslated region.

Authors:  Linda Tillmar; Nils Welsh
Journal:  Mol Med       Date:  2002-05       Impact factor: 6.354

Review 8.  The role of PTB in insulin mRNA stability control.

Authors:  Rickard G Fred; Linda Tillmar; Nils Welsh
Journal:  Curr Diabetes Rev       Date:  2006-08

9.  Splicing of a myosin phosphatase targeting subunit 1 alternative exon is regulated by intronic cis-elements and a novel bipartite exonic enhancer/silencer element.

Authors:  Wessel P Dirksen; Sotohy A Mohamed; Steven A Fisher
Journal:  J Biol Chem       Date:  2002-12-30       Impact factor: 5.157

10.  The dynamic organization of the perinucleolar compartment in the cell nucleus.

Authors:  S Huang; T J Deerinck; M H Ellisman; D L Spector
Journal:  J Cell Biol       Date:  1997-06-02       Impact factor: 10.539

View more
  90 in total

1.  Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon.

Authors:  Lin Lin; Min Zhang; Peter Stoilov; Liang Chen; Sika Zheng
Journal:  Neuron       Date:  2020-07-24       Impact factor: 17.173

2.  Ptbp2 Controls an Alternative Splicing Network Required for Cell Communication during Spermatogenesis.

Authors:  Molly M Hannigan; Leah L Zagore; Donny D Licatalosi
Journal:  Cell Rep       Date:  2017-06-20       Impact factor: 9.423

3.  Post-Translational Modifications in Polypyrimidine Tract Binding Proteins PTBP1 and PTBP2.

Authors:  Jeffrey M Pina; Janice M Reynaga; Anthony A M Truong; Niroshika M Keppetipola
Journal:  Biochemistry       Date:  2018-06-13       Impact factor: 3.162

Review 4.  Poison exons in neurodevelopment and disease.

Authors:  Gemma L Carvill; Heather C Mefford
Journal:  Curr Opin Genet Dev       Date:  2020-06-29       Impact factor: 5.578

5.  Polypyrimidine tract-binding protein blocks miRNA-124 biogenesis to enforce its neuronal-specific expression in the mouse.

Authors:  Kyu-Hyeon Yeom; Simon Mitchell; Anthony J Linares; Sika Zheng; Chia-Ho Lin; Xiao-Jun Wang; Alexander Hoffmann; Douglas L Black
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-06       Impact factor: 11.205

6.  lncRNA ZNF649-AS1 Induces Trastuzumab Resistance by Promoting ATG5 Expression and Autophagy.

Authors:  Mingli Han; Xueke Qian; Hui Cao; Fang Wang; Xiangke Li; Na Han; Xue Yang; Yunqing Yang; Dongwei Dou; Jianguo Hu; Wei Wang; Jing Han; Fan Zhang; Huaying Dong
Journal:  Mol Ther       Date:  2020-07-21       Impact factor: 11.454

7.  Prenatal arsenic exposure alters REST/NRSF and microRNA regulators of embryonic neural stem cell fate in a sex-dependent manner.

Authors:  Christina R Tyler; Matthew T Labrecque; Elizabeth R Solomon; Xun Guo; Andrea M Allan
Journal:  Neurotoxicol Teratol       Date:  2016-10-14       Impact factor: 3.763

8.  A pathway involving HDAC5, cFLIP and caspases regulates expression of the splicing regulator polypyrimidine tract binding protein in the heart.

Authors:  Junmei Ye; Miriam Llorian; Maria Cardona; Anthony Rongvaux; Rana S Moubarak; Joan X Comella; Rhonda Bassel-Duby; Richard A Flavell; Eric N Olson; Christopher W J Smith; Daniel Sanchis
Journal:  J Cell Sci       Date:  2013-02-19       Impact factor: 5.285

9.  Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex.

Authors:  Xiaochang Zhang; Ming Hui Chen; Xuebing Wu; Andrew Kodani; Jean Fan; Ryan Doan; Manabu Ozawa; Jacqueline Ma; Nobuaki Yoshida; Jeremy F Reiter; Douglas L Black; Peter V Kharchenko; Phillip A Sharp; Christopher A Walsh
Journal:  Cell       Date:  2016-08-25       Impact factor: 41.582

10.  5'-UTR SNP of FGF13 causes translational defect and intellectual disability.

Authors:  Xingyu Pan; Jingrong Zhao; Zhiying Zhou; Jijun Chen; Zhenxing Yang; Yuxuan Wu; Meizhu Bai; Yang Jiao; Yun Yang; Xuye Hu; Tianling Cheng; Qianyun Lu; Bin Wang; Chang-Lin Li; Ying-Jin Lu; Lei Diao; Yan-Qing Zhong; Jing Pan; Jianmin Zhu; Hua-Sheng Xiao; Zi-Long Qiu; Jinsong Li; Zefeng Wang; Jingyi Hui; Lan Bao; Xu Zhang
Journal:  Elife       Date:  2021-06-29       Impact factor: 8.140

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.