Literature DB >> 22653491

Priming mass spectrometry-based sulfoglycomic mapping for identification of terminal sulfated lacdiNAc glycotope.

Shin-Yi Yu1, Lan-Yi Chang, Chu-Wen Cheng, Chi-Chi Chou, Michiko N Fukuda, Kay-Hooi Khoo.   

Abstract

In an effort to prime our mass spectrometry (MS)-based sulfoglycomic mapping platform technology for facile identification of sulfated lacdiNAc (GalNAcβ1-4GlcNAcβ1-), we have re-examined the N-glycans of bovine thyroid stimulating hormone. We showed that MALDI-MS mapping of permethylated glycans in negative ion mode can give an accurate representation of the sulfated glycans and, through MS/MS, diagnostic ions can be derived that we can collectively define the presence of a terminal sulfated lacdiNAc moiety at high sensitivity. Based on these ions, which can also be produced by nanoESI-MS(n), we demonstrated that the glycome of an ovarian carcinoma cell line, RMG-1, comprises a high abundance of sulfated lacdiNAc epitopes carried on multiantennary complex type N-glycans alongside fucosylated, sialylated and/or sulfated lacNAc antennae. This represents the first report of a natural glycomic occurrence of sulfated lacdiNAc on a cell line, as opposed to other better-characterized presence on secreted glycoproteins from a handful of sources. It is anticipated that with improved methods of detection such as that developed in this work, we are likely to identify a wider occurrence of sulfated lacdiNAc and be able to more accurately delineate the regulatory mechanism dictating the choice of a cell type in synthesizing sulfated, sialylated, fucosylated and/or non-substituted lacdiNAc.

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Year:  2012        PMID: 22653491     DOI: 10.1007/s10719-012-9396-z

Source DB:  PubMed          Journal:  Glycoconj J        ISSN: 0282-0080            Impact factor:   2.916


  43 in total

1.  Mass spectrometric analysis of sulfated N- and O-glycans.

Authors:  Kay-Hooi Khoo; Shin-Yi Yu
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

2.  Distinctive characteristics of MALDI-Q/TOF and TOF/TOF tandem mass spectrometry for sequencing of permethylated complex type N-glycans.

Authors:  Shin-Yi Yu; Sz-Wei Wu; Kay-Hooi Khoo
Journal:  Glycoconj J       Date:  2006-07       Impact factor: 2.916

3.  Structural studies of phosphorylated high mannose-type oligosaccharides.

Authors:  A Varki; S Kornfeld
Journal:  J Biol Chem       Date:  1980-11-25       Impact factor: 5.157

4.  Diagnostic ions for the rapid analysis by nano-electrospray ionization quadrupole time-of-flight mass spectrometry of O-glycans from human mucins.

Authors:  Catherine Robbe; Calliope Capon; Bernadette Coddeville; Jean-Claude Michalski
Journal:  Rapid Commun Mass Spectrom       Date:  2004       Impact factor: 2.419

5.  Sulfated di-, tri- and tetraantennary N-glycans in human Tamm-Horsfall glycoprotein.

Authors:  J J van Rooijen; J P Kamerling; J F Vliegenthart
Journal:  Eur J Biochem       Date:  1998-09-01

6.  Effects of differential glycosylation of glycodelins on lymphocyte survival.

Authors:  Cheuk-Lun Lee; Poh-Choo Pang; William S B Yeung; Bérangère Tissot; Maria Panico; Terence T H Lao; Ivan K Chu; Kai-Fai Lee; Man-Kin Chung; Kevin K W Lam; Riitta Koistinen; Hannu Koistinen; Markku Seppälä; Howard R Morris; Anne Dell; Philip C N Chiu
Journal:  J Biol Chem       Date:  2009-02-24       Impact factor: 5.157

7.  Asparagine-linked oligosaccharides on lutropin, follitropin, and thyrotropin. II. Distributions of sulfated and sialylated oligosaccharides on bovine, ovine, and human pituitary glycoprotein hormones.

Authors:  E D Green; J U Baenziger
Journal:  J Biol Chem       Date:  1988-01-05       Impact factor: 5.157

8.  Asparagine-linked oligosaccharides on lutropin, follitropin, and thyrotropin. I. Structural elucidation of the sulfated and sialylated oligosaccharides on bovine, ovine, and human pituitary glycoprotein hormones.

Authors:  E D Green; J U Baenziger
Journal:  J Biol Chem       Date:  1988-01-05       Impact factor: 5.157

9.  Identification of mono- and disulfated N-acetyl-lactosaminyl Oligosaccharide structures as epitopes specifically recognized by humanized monoclonal antibody HMOCC-1 raised against ovarian cancer.

Authors:  Toshiaki K Shibata; Fumiko Matsumura; Ping Wang; Shinyi Yu; Chi-Chi Chou; Kay-Hooi Khoo; Kazuko Kitayama; Tomoya O Akama; Kazuhiro Sugihara; Naohiro Kanayama; Kyoko Kojima-Aikawa; Peter H Seeberger; Minoru Fukuda; Atsushi Suzuki; Daisuke Aoki; Michiko N Fukuda
Journal:  J Biol Chem       Date:  2011-12-22       Impact factor: 5.157

10.  Structural analysis of sulfated glycans by sequential double-permethylation using methyl iodide and deuteromethyl iodide.

Authors:  Ming Lei; Yehia Mechref; Milos V Novotny
Journal:  J Am Soc Mass Spectrom       Date:  2009-05-18       Impact factor: 3.262

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  7 in total

1.  Specific glycosylation of membrane proteins in epithelial ovarian cancer cell lines: glycan structures reflect gene expression and DNA methylation status.

Authors:  Merrina Anugraham; Francis Jacob; Sheri Nixdorf; Arun Vijay Everest-Dass; Viola Heinzelmann-Schwarz; Nicolle H Packer
Journal:  Mol Cell Proteomics       Date:  2014-05-22       Impact factor: 5.911

2.  Efficient Mapping of Sulfated Glycotopes by Negative Ion Mode nanoLC-MS/MS-Based Sulfoglycomic Analysis of Permethylated Glycans.

Authors:  Chu-Wen Cheng; Chi-Chi Chou; Hsiao-Wu Hsieh; Zhijay Tu; Chun-Hung Lin; Corwin Nycholat; Minoru Fukuda; Kay-Hooi Khoo
Journal:  Anal Chem       Date:  2015-06-05       Impact factor: 6.986

3.  Improved in-gel reductive β-elimination for comprehensive O-linked and sulfo-glycomics by mass spectrometry.

Authors:  David B Nix; Tadahiro Kumagai; Toshihiko Katoh; Michael Tiemeyer; Kazuhiro Aoki
Journal:  J Vis Exp       Date:  2014-11-20       Impact factor: 1.355

4.  Permethylation and Microfractionation of Sulfated Glycans for MS Analysis.

Authors:  Shin-Yi Yu; Sergei Snovida; Kay-Hooi Khoo
Journal:  Bio Protoc       Date:  2020-05-20

5.  Galactose 6-O-sulfotransferases are not required for the generation of Siglec-F ligands in leukocytes or lung tissue.

Authors:  Michael L Patnode; Chu-Wen Cheng; Chi-Chi Chou; Mark S Singer; Matilda S Elin; Kenji Uchimura; Paul R Crocker; Kay-Hooi Khoo; Steven D Rosen
Journal:  J Biol Chem       Date:  2013-07-23       Impact factor: 5.157

6.  Discovery Sulfoglycomics and Identification of the Characteristic Fragment Ions for High-Sensitivity Precise Mapping of Adult Zebrafish Brain-Specific Glycotopes.

Authors:  Huan-Chuan Tseng; Cheng-Te Hsiao; Nao Yamakawa; Yann Guérardel; Kay-Hooi Khoo
Journal:  Front Mol Biosci       Date:  2021-12-20

Review 7.  Biosynthesis and Biological Significances of LacdiNAc Group on N- and O-Glycans in Human Cancer Cells.

Authors:  Kiyoko Hirano; Kiyoshi Furukawa
Journal:  Biomolecules       Date:  2022-01-24
  7 in total

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