Literature DB >> 22645233

Genome sequence of an unclassified pleosporales species isolated from human nasopharyngeal aspirate.

Kee Peng Ng1, Su Mei Yew, Chai Ling Chan, Tuck Soon Soo-Hoo, Shiang Ling Na, Hamimah Hassan, Yun Fong Ngeow, Chee Choong Hoh, Kok Wei Lee, Wai Yan Yee.   

Abstract

Pleosporales is the largest order in the fungal class Dothideomycetes. We report the 36,814,818-bp draft genome sequence and gene annotation of UM1110, a Pleosporales isolate associated with unclassified genera that is potentially a new fungal species. Analysis of the genome sequence led to the finding of genes associated with fungal adhesive proteins, secreted proteases, allergens, and pseudohyphal development.

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Year:  2012        PMID： 22645233      PMCID： PMC3370471          DOI： 10.1128/EC.00133-12

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN： 1535-9786


  10 in total

Review 1.  Fungi and allergic lower respiratory tract diseases.

Authors:  Alan P Knutsen; Robert K Bush; Jeffrey G Demain; David W Denning; Anupma Dixit; Abbie Fairs; Paul A Greenberger; Barbara Kariuki; Hirohito Kita; Viswanath P Kurup; Richard B Moss; Robert M Niven; Catherine H Pashley; Raymond G Slavin; Hari M Vijay; Andrew J Wardlaw
Journal:  J Allergy Clin Immunol       Date:  2012-02       Impact factor: 10.793

2.  Global control of dimorphism and virulence in fungi.

Authors:  Julie C Nemecek; Marcel Wüthrich; Bruce S Klein
Journal:  Science       Date:  2006-04-28       Impact factor: 47.728

Review 3.  Glycosylation and biogenesis of a family of serine-rich bacterial adhesins.

Authors:  Meixian Zhou; Hui Wu
Journal:  Microbiology (Reading)       Date:  2009-02       Impact factor: 2.777

4.  Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training.

Authors:  Vardges Ter-Hovhannisyan; Alexandre Lomsadze; Yury O Chernoff; Mark Borodovsky
Journal:  Genome Res       Date:  2008-08-29       Impact factor: 9.043

Review 5.  Pathogenesis of dermatophytosis.

Authors:  Sandy Vermout; Jérémy Tabart; Aline Baldo; Anne Mathy; Bertrand Losson; Bernard Mignon
Journal:  Mycopathologia       Date:  2008-05-14       Impact factor: 2.574

6.  Isolation and characterization of EPD1, an essential gene for pseudohyphal growth of a dimorphic yeast, Candida maltosa.

Authors:  T Nakazawa; H Horiuchi; A Ohta; M Takagi
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

7.  Independent subtilases expansions in fungi associated with animals.

Authors:  Anna Muszewska; John W Taylor; Pawel Szczesny; Marcin Grynberg
Journal:  Mol Biol Evol       Date:  2011-07-04       Impact factor: 16.240

8.  The cell surface flocculin Flo11 is required for pseudohyphae formation and invasion by Saccharomyces cerevisiae.

Authors:  W S Lo; A M Dranginis
Journal:  Mol Biol Cell       Date:  1998-01       Impact factor: 4.138

9.  SOAP: short oligonucleotide alignment program.

Authors:  Ruiqiang Li; Yingrui Li; Karsten Kristiansen; Jun Wang
Journal:  Bioinformatics       Date:  2008-01-28       Impact factor: 6.937

10.  Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation.

Authors:  Y Zhang; C L Schoch; J Fournier; P W Crous; J de Gruyter; J H C Woudenberg; K Hirayama; K Tanaka; S B Pointing; J W Spatafora; K D Hyde
Journal:  Stud Mycol       Date:  2009       Impact factor: 16.097
  10 in total
  1 in total

1.  Characterization of Nuclear and Mitochondrial Genomes of Two Tobacco Endophytic Fungi Leptosphaerulina chartarum and Curvularia trifolii and Their Contributions to Phylogenetic Implications in the Pleosporales.

Authors:  Xiao-Long Yuan; Min Cao; Guo-Ming Shen; Huai-Bao Zhang; Yong-Mei Du; Zhong-Feng Zhang; Qian Li; Jia-Ming Gao; Lin Xue; Zhi-Peng Wang; Peng Zhang
Journal:  Int J Mol Sci       Date:  2020-04-02       Impact factor: 5.923
  1 in total

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