Literature DB >> 22645140

The role of glycine residues 140 and 141 of subunit B in the functional ubiquinone binding site of the Na+-pumping NADH:quinone oxidoreductase from Vibrio cholerae.

Oscar Juárez1, Yashvin Neehaul, Erin Turk, Najat Chahboun, Jessica M DeMicco, Petra Hellwig, Blanca Barquera.   

Abstract

The Na(+)-pumping NADH:quinone oxidoreductase (Na(+)-NQR) is the main entrance for electrons into the respiratory chain of many marine and pathogenic bacteria. The enzyme accepts electrons from NADH and donates them to ubiquinone, and the free energy released by this redox reaction is used to create an electrochemical gradient of sodium across the cell membrane. Here we report the role of glycine 140 and glycine 141 of the NqrB subunit in the functional binding of ubiquinone. Mutations at these residues altered the affinity of the enzyme for ubiquinol. Moreover, mutations in residue NqrB-G140 almost completely abolished the electron transfer to ubiquinone. Thus, NqrB-G140 and -G141 are critical for the binding and reaction of Na(+)-NQR with its electron acceptor, ubiquinone.

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Year:  2012        PMID: 22645140      PMCID: PMC3408181          DOI: 10.1074/jbc.M112.366088

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

1.  Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association.

Authors:  M M Javadpour; M Eilers; M Groesbeek; S O Smith
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  Korormicin, an antibiotic specific for gram-negative marine bacteria, strongly inhibits the respiratory chain-linked Na+-translocating NADH: quinone reductase from the marine Vibrio alginolyticus.

Authors:  K Yoshikawa; Y Nakayama; M Hayashi; T Unemoto; K Mochida
Journal:  J Antibiot (Tokyo)       Date:  1999-02       Impact factor: 2.649

3.  A new flavin radical signal in the Na(+)-pumping NADH:quinone oxidoreductase from Vibrio cholerae. An EPR/electron nuclear double resonance investigation of the role of the covalently bound flavins in subunits B and C.

Authors:  Blanca Barquera; Leticia Ramirez-Silva; Joel E Morgan; Mark J Nilges
Journal:  J Biol Chem       Date:  2006-09-13       Impact factor: 5.157

4.  Redox dependent changes at the heme propionates in cytochrome c oxidase from Paracoccus denitrificans: direct evidence from FTIR difference spectroscopy in combination with heme propionate 13C labeling.

Authors:  J Behr; P Hellwig; W Mäntele; H Michel
Journal:  Biochemistry       Date:  1998-05-19       Impact factor: 3.162

5.  Korormicin, a novel antibiotic specifically active against marine gram-negative bacteria, produced by a marine bacterium.

Authors:  K Yoshikawa; T Takadera; K Adachi; M Nishijima; H Sano
Journal:  J Antibiot (Tokyo)       Date:  1997-11       Impact factor: 2.649

Review 6.  Determination of soluble and membrane protein structure by Fourier transform infrared spectroscopy. III. Secondary structures.

Authors:  E Goormaghtigh; V Cabiaux; J M Ruysschaert
Journal:  Subcell Biochem       Date:  1994

7.  The effects of amino acid replacements of glycine 121 on transmembrane helix 3 of rhodopsin.

Authors:  M Han; S W Lin; S O Smith; T P Sakmar
Journal:  J Biol Chem       Date:  1996-12-13       Impact factor: 5.157

8.  Riboflavin is an active redox cofactor in the Na+-pumping NADH: quinone oxidoreductase (Na+-NQR) from Vibrio cholerae.

Authors:  Oscar Juárez; Mark J Nilges; Portia Gillespie; Jennifer Cotton; Blanca Barquera
Journal:  J Biol Chem       Date:  2008-10-02       Impact factor: 5.157

9.  The occurrence of C-H...O hydrogen bonds in proteins.

Authors:  Z S Derewenda; L Lee; U Derewenda
Journal:  J Mol Biol       Date:  1995-09-15       Impact factor: 5.469

10.  NADH:ubiquinone oxidoreductase of Vibrio alginolyticus: purification, properties, and reconstitution of the Na+ pump.

Authors:  X D Pfenninger-Li; S P Albracht; R van Belzen; P Dimroth
Journal:  Biochemistry       Date:  1996-05-21       Impact factor: 3.162

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  16 in total

1.  The Kinetic Reaction Mechanism of the Vibrio cholerae Sodium-dependent NADH Dehydrogenase.

Authors:  Karina Tuz; Katherine G Mezic; Tianhao Xu; Blanca Barquera; Oscar Juárez
Journal:  J Biol Chem       Date:  2015-05-23       Impact factor: 5.157

Review 2.  The sodium pumping NADH:quinone oxidoreductase (Na⁺-NQR), a unique redox-driven ion pump.

Authors:  Blanca Barquera
Journal:  J Bioenerg Biomembr       Date:  2014-07-23       Impact factor: 2.945

3.  Characterization of the Pseudomonas aeruginosa NQR complex, a bacterial proton pump with roles in autopoisoning resistance.

Authors:  Daniel A Raba; Monica Rosas-Lemus; William M Menzer; Chen Li; Xuan Fang; Pingdong Liang; Karina Tuz; David D L Minh; Oscar Juárez
Journal:  J Biol Chem       Date:  2018-08-22       Impact factor: 5.157

4.  Dynamic energy dependency of Chlamydia trachomatis on host cell metabolism during intracellular growth: Role of sodium-based energetics in chlamydial ATP generation.

Authors:  Pingdong Liang; Mónica Rosas-Lemus; Dhwani Patel; Xuan Fang; Karina Tuz; Oscar Juárez
Journal:  J Biol Chem       Date:  2017-11-09       Impact factor: 5.157

5.  Antibiotic Korormicin A Kills Bacteria by Producing Reactive Oxygen Species.

Authors:  Nicole L Butler; Takeshi Ito; Adam Maynard; Adilson José da Silva; Masatoshi Murai; Tsute Chen; Mattheos A G Koffas; Hideto Miyoshi; Blanca Barquera
Journal:  J Bacteriol       Date:  2019-05-08       Impact factor: 3.490

6.  NMR reveals double occupancy of quinone-type ligands in the catalytic quinone binding site of the Na+-translocating NADH:Quinone oxidoreductase from Vibrio cholerae.

Authors:  Ruslan Nedielkov; Wojtek Steffen; Julia Steuber; Heiko M Möller
Journal:  J Biol Chem       Date:  2013-09-03       Impact factor: 5.157

7.  Identification of the binding sites for ubiquinone and inhibitors in the Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae by photoaffinity labeling.

Authors:  Takeshi Ito; Masatoshi Murai; Satoshi Ninokura; Yuki Kitazumi; Katherine G Mezic; Brady F Cress; Mattheos A G Koffas; Joel E Morgan; Blanca Barquera; Hideto Miyoshi
Journal:  J Biol Chem       Date:  2017-03-15       Impact factor: 5.157

8.  Identification of the Catalytic Ubiquinone-binding Site of Vibrio cholerae Sodium-dependent NADH Dehydrogenase: A NOVEL UBIQUINONE-BINDING MOTIF.

Authors:  Karina Tuz; Chen Li; Xuan Fang; Daniel A Raba; Pingdong Liang; David D L Minh; Oscar Juárez
Journal:  J Biol Chem       Date:  2017-01-04       Impact factor: 5.157

9.  Inhibitors of a Na+-pumping NADH-ubiquinone oxidoreductase play multiple roles to block enzyme function.

Authors:  Takahiro Masuya; Yuki Sano; Hinako Tanaka; Nicole L Butler; Takeshi Ito; Tatsuhiko Tosaki; Joel E Morgan; Masatoshi Murai; Blanca Barquera; Hideto Miyoshi
Journal:  J Biol Chem       Date:  2020-07-20       Impact factor: 5.157

10.  The conformational changes induced by ubiquinone binding in the Na+-pumping NADH:ubiquinone oxidoreductase (Na+-NQR) are kinetically controlled by conserved glycines 140 and 141 of the NqrB subunit.

Authors:  Madeleine Strickland; Oscar Juárez; Yashvin Neehaul; Darcie A Cook; Blanca Barquera; Petra Hellwig
Journal:  J Biol Chem       Date:  2014-07-08       Impact factor: 5.157

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