Literature DB >> 22645083

Rapid progress of DNA replication studies in Archaea, the third domain of life.

Yoshizumi Ishino1, Sonoko Ishino.   

Abstract

Archaea, the third domain of life, are interesting organisms to study from the aspects of molecular and evolutionary biology. Archaeal cells have a unicellular ultrastructure without a nucleus, resembling bacterial cells, but the proteins involved in genetic information processing pathways, including DNA replication, transcription, and translation, share strong similarities with those of Eukaryota. Therefore, archaea provide useful model systems to understand the more complex mechanisms of genetic information processing in eukaryotic cells. Moreover, the hyperthermophilic archaea provide very stable proteins, which are especially useful for the isolation of replisomal multicomplexes, to analyze their structures and functions. This review focuses on the history, current status, and future directions of archaeal DNA replication studies.

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Year:  2012        PMID: 22645083     DOI: 10.1007/s11427-012-4324-9

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  23 in total

Review 1.  The cell cycle of archaea.

Authors:  Ann-Christin Lindås; Rolf Bernander
Journal:  Nat Rev Microbiol       Date:  2013-07-29       Impact factor: 60.633

2.  Elucidating functions of DP1 and DP2 subunits from the Thermococcus kodakarensis family D DNA polymerase.

Authors:  Natsuki Takashima; Sonoko Ishino; Keisuke Oki; Mika Takafuji; Takeshi Yamagami; Ryotaro Matsuo; Kouta Mayanagi; Yoshizumi Ishino
Journal:  Extremophiles       Date:  2018-11-30       Impact factor: 2.395

3.  The GAN Exonuclease or the Flap Endonuclease Fen1 and RNase HII Are Necessary for Viability of Thermococcus kodakarensis.

Authors:  Brett W Burkhart; Lubomira Cubonova; Margaret R Heider; Zvi Kelman; John N Reeve; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2017-06-13       Impact factor: 3.490

4.  The RecJ2 protein in the thermophilic archaeon Thermoplasma acidophilum is a 3'-5' exonuclease that associates with a DNA replication complex.

Authors:  Hiromi Ogino; Sonoko Ishino; Daisuke Kohda; Yoshizumi Ishino
Journal:  J Biol Chem       Date:  2017-03-16       Impact factor: 5.157

5.  Thermococcus kodakarensis has two functional PCNA homologs but only one is required for viability.

Authors:  Miao Pan; Thomas J Santangelo; Lubomíra Čuboňová; Zhuo Li; Harlette Metangmo; Jane Ladner; Jerard Hurwitz; John N Reeve; Zvi Kelman
Journal:  Extremophiles       Date:  2013-03-24       Impact factor: 2.395

6.  Dynamic elements of replication protein A at the crossroads of DNA replication, recombination, and repair.

Authors:  Colleen C Caldwell; Maria Spies
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-08-28       Impact factor: 8.250

7.  Activation of the MCM helicase from the thermophilic archaeon, Thermoplasma acidophilum by interactions with GINS and Cdc6-2.

Authors:  Hiromi Ogino; Sonoko Ishino; Gyri Teien Haugland; Nils-Kåre Birkeland; Daisuke Kohda; Yoshizumi Ishino
Journal:  Extremophiles       Date:  2014-08-09       Impact factor: 2.395

8.  Archaeal DNA polymerase D but not DNA polymerase B is required for genome replication in Thermococcus kodakarensis.

Authors:  Lubomira Cubonová; Tomas Richardson; Brett W Burkhart; Zvi Kelman; Bernard A Connolly; John N Reeve; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2013-03-15       Impact factor: 3.490

9.  Characterization of the replication initiator Orc1/Cdc6 from the Archaeon Picrophilus torridus.

Authors:  Jasmine Arora; Kasturi Goswami; Swati Saha
Journal:  J Bacteriol       Date:  2013-11-01       Impact factor: 3.490

10.  A novel single-strand specific 3'-5' exonuclease found in the hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Kazuo Tori; Sonoko Ishino; Shinichi Kiyonari; Saki Tahara; Yoshizumi Ishino
Journal:  PLoS One       Date:  2013-03-07       Impact factor: 3.240

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