Literature DB >> 22645016

Real-time PCR detection of enteric viruses in source water and treated drinking water in Wuhan, China.

Xiao Yan Ye1, Xing Ming, Yong Lu Zhang, Wen Qing Xiao, Xia Ning Huang, Yu Guang Cao, Kang Ding Gu.   

Abstract

A total of 48 water samples were collected from six water treatment plants in Wuhan and analyzed by real-time PCR assay for viral identification of enterovirus (EV), rotavirus group A (RVA), human adenovirus (HAdV) as well as human adenovirus subgroup F (HAdVF) during the period from December 2010 to October 2011. HAdV, HAdVF, and RVA were all positively detected in the samples of source water and treated drinking water. EV could be found in 46 % (11/24) of all the source water samples, but only 21 % (5/24) positive in treated drinking water. The concentrations of these three kinds of enteric viruses detected were as follows: HAdV > RVA > EV. The highest removal rate was EV (97 %), followed by RVA (82 %), HAdV (73 %), and HAdVF (72 %). HAdV and RVA have been abundant in untreated river water and finished water after conventional processes of water treatment plants, while bacterial indicators could not be detected in tap water, which met the standard of China for drinking water bacterial quality. Some factors that could affect the accuracy of qPCR detection are also discussed in this study.

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Year:  2012        PMID: 22645016     DOI: 10.1007/s00284-012-0152-1

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  30 in total

1.  Simultaneous detection of enteric viruses by multiplex real-time RT-PCR.

Authors:  Christian Beuret
Journal:  J Virol Methods       Date:  2004-01       Impact factor: 2.014

2.  Failure of indicator bacteria to reflect the occurrence of enteroviruses in marine waters.

Authors:  C P Gerba; S M Goyal; R L LaBelle; I Cech; G F Bodgan
Journal:  Am J Public Health       Date:  1979-11       Impact factor: 9.308

3.  Isolation and detection of enterovirus RNA from large-volume water samples by using the NucliSens miniMAG system and real-time nucleic acid sequence-based amplification.

Authors:  Saskia A Rutjes; Ronald Italiaander; Harold H J L van den Berg; Willemijn J Lodder; Ana Maria de Roda Husman
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

4.  Detection of enteric viruses and bacterial indicators in German environmental waters.

Authors:  D Pusch; D-Y Oh; S Wolf; R Dumke; U Schröter-Bobsin; M Höhne; I Röske; E Schreier
Journal:  Arch Virol       Date:  2005-01-13       Impact factor: 2.574

5.  Detection of infectious rotavirus in naturally contaminated source waters for drinking water production.

Authors:  S A Rutjes; W J Lodder; A Docters van Leeuwen; A M de Roda Husman
Journal:  J Appl Microbiol       Date:  2009-03-03       Impact factor: 3.772

6.  Detection and molecular characterization of noroviruses from five sewage treatment plants in central Italy.

Authors:  G La Rosa; M Iaconelli; M Pourshaban; M Muscillo
Journal:  Water Res       Date:  2009-12-05       Impact factor: 11.236

7.  Assessment of the quantitative real-time polymerase chain reaction using a cDNA standard for human group A rotavirus.

Authors:  Bok-Soon Min; Yoon-Ju Noh; Jin-Ho Shin; Sun-Young Baek; Kyung-Il Min; Seung-Rel Ryu; Byoung-Guk Kim; Mi-Kyung Park; Seung-Eun Choi; Eun-Hee Yang; Sue-Nie Park; Sook-Jin Hur; Byung-Yoon Ahn
Journal:  J Virol Methods       Date:  2006-08-07       Impact factor: 2.014

8.  Identification of human and animal adenoviruses and polyomaviruses for determination of sources of fecal contamination in the environment.

Authors:  Ayalkibet Hundesa; Carlos Maluquer de Motes; Silvia Bofill-Mas; Nestor Albinana-Gimenez; Rosina Girones
Journal:  Appl Environ Microbiol       Date:  2006-10-13       Impact factor: 4.792

9.  Evaluation of potential indicators of viral contamination in shellfish and their applicability to diverse geographical areas.

Authors:  M Formiga-Cruz; A K Allard; A-C Conden-Hansson; K Henshilwood; B E Hernroth; J Jofre; D N Lees; F Lucena; M Papapetropoulou; R E Rangdale; A Tsibouxi; A Vantarakis; R Girones
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

10.  A multiplex reverse transcription-PCR method for detection of human enteric viruses in groundwater.

Authors:  G Shay Fout; Beth C Martinson; Michael W N Moyer; Daniel R Dahling
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

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  15 in total

1.  Organic substances interfere with reverse transcription-quantitative PCR-based virus detection in water samples.

Authors:  Akihiko Hata; Hiroyuki Katayama; Hiroaki Furumai
Journal:  Appl Environ Microbiol       Date:  2014-12-19       Impact factor: 4.792

2.  Molecular surveillance of human rotaviruses in drinking water and investigation of the efficiency of their removal in Isfahan water treatment plant.

Authors:  Paymaneh Atabakhsh; Mohammad Kargar; Abbas Doosti
Journal:  Environ Monit Assess       Date:  2019-11-19       Impact factor: 2.513

3.  Detection of Human Adenovirus, Rotavirus, and Enterovirus in Tap Water and Their Association with the Overall Quality of Water in Karachi, Pakistan.

Authors:  Muhammad Rashid; Muhammad Naseem Khan; Nusrat Jalbani
Journal:  Food Environ Virol       Date:  2020-11-12       Impact factor: 2.778

4.  Viability RT-qPCR Combined with Sodium Deoxycholate Pre-treatment for Selective Quantification of Infectious Viruses in Drinking Water Samples.

Authors:  Vu Duc Canh; Ikuro Kasuga; Hiroaki Furumai; Hiroyuki Katayama
Journal:  Food Environ Virol       Date:  2019-01-24       Impact factor: 2.778

5.  Quantification of human adenovirus and norovirus in river water in the north-east of France.

Authors:  Maryse Iris Sedji; Mihayl Varbanov; Marie Meo; Marius Colin; Laurence Mathieu; Isabelle Bertrand
Journal:  Environ Sci Pollut Res Int       Date:  2018-08-30       Impact factor: 4.223

Review 6.  Detection and evaluation of rotavirus surveillance methods as viral indicator in the aquatic environments.

Authors:  Paymaneh Atabakhsh; Mohammad Kargar; Abbas Doosti
Journal:  Braz J Microbiol       Date:  2021-02-18       Impact factor: 2.476

7.  Recombinant adenovirus as a model to evaluate the efficiency of free chlorine disinfection in filtered water samples.

Authors:  Mariana A Nascimento; Maria E Magri; Camila D Schissi; Célia Rm Barardi
Journal:  Virol J       Date:  2015-02-22       Impact factor: 4.099

8.  EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. Part III. Virus Detection by RT-qPCR.

Authors:  G Shay Fout; Jennifer L Cashdollar; Shannon M Griffin; Nichole E Brinkman; Eunice A Varughese; Sandhya U Parshionikar
Journal:  J Vis Exp       Date:  2016-01-16       Impact factor: 1.355

9.  Monitoring of Poyang lake water for sewage contamination using human enteric viruses as an indicator.

Authors:  Hui Zhu; Fang Yuan; Zhaokang Yuan; Rong Liu; Fei Xie; Ling Huang; Xiaojun Liu; Xiaoqing Jiang; Jian Wang; Qunying Xu; Zhiqiang Shen; Donghan Liu; Ronghao Zhang; Yuanan Lu
Journal:  Virol J       Date:  2018-01-05       Impact factor: 4.099

10.  Quantification of human and animal viruses to differentiate the origin of the fecal contamination present in environmental samples.

Authors:  Sílvia Bofill-Mas; Marta Rusiñol; Xavier Fernandez-Cassi; Anna Carratalà; Ayalkibet Hundesa; Rosina Girones
Journal:  Biomed Res Int       Date:  2013-05-15       Impact factor: 3.411

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