Literature DB >> 22644442

Functional screening of cDNA library from a salt tolerant rice genotype Pokkali identifies mannose-1-phosphate guanyl transferase gene (OsMPG1) as a key member of salinity stress response.

Ritesh Kumar1, Ananda Mustafiz, Khirod Kumar Sahoo, Vishal Sharma, Subhasis Samanta, Sudhir Kumar Sopory, Ashwani Pareek, Sneh Lata Singla-Pareek.   

Abstract

Salinity, one of the most deleterious stresses, affects growth and overall yield of crop plants. To identify new "candidate genes" having potential role in salinity tolerance, we have carried out 'functional screening' of a cDNA library (made from a salt tolerant rice-Pokkali). Based on this screening, we identified a cDNA clone that was allowing yeast cells to grow in the presence of 1.2 M NaCl. Sequencing and BLAST search identified it as mannose-1-phosphate guanyl transferase (OsMPG1) gene from rice. Analysis of rice genome sequence database indicated the presence of 3 additional genes for MPG. Out of four, three MPG genes viz. OsMPG1, 3 and 4 were able to functionally complement yeast MPG mutant -YDL055C. We have carried out detailed transcript profiling of all members of MPG family by qRT-PCR using two contrasting rice genotypes (IR64 and Pokkali) under different abiotic stresses (salinity, drought, oxidative stress, heat stress, cold or UV light). These MPG genes showed differential expression under various abiotic stresses with two genes (OsMPG1 and 3) showing high induction in response to multiple stresses. Analysis of rice microarray data indicated higher expression levels for OsMPG1 in specific tissues such as roots, leaves, shoot apical meristem and different stages of panicle and seed development, thereby indicating its developmental regulation. Functional validation of OsMPG1 carried out by overexpression in the transgenic tobacco revealed its involvement in enhancing salinity stress tolerance.

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Year:  2012        PMID: 22644442     DOI: 10.1007/s11103-012-9928-8

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  60 in total

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Journal:  Nat Biotechnol       Date:  2002-12-09       Impact factor: 54.908

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Journal:  Genet Eng (N Y)       Date:  2006

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Authors:  Faïçal Brini; Moez Hanin; Imed Mezghani; Gerald A Berkowitz; Khaled Masmoudi
Journal:  J Exp Bot       Date:  2007-01-17       Impact factor: 6.992

5.  Raising salinity tolerant rice: recent progress and future perspectives.

Authors:  Anil K Singh; Mohammad W Ansari; Ashwani Pareek; Sneh L Singla-Pareek
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Authors:  M Kasuga; Q Liu; S Miura; K Yamaguchi-Shinozaki; K Shinozaki
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8.  Histidine kinase and response regulator genes as they relate to salinity tolerance in rice.

Authors:  Ratna Karan; Sneh L Singla-Pareek; Ashwani Pareek
Journal:  Funct Integr Genomics       Date:  2009-03-11       Impact factor: 3.410

9.  Cluster analysis and display of genome-wide expression patterns.

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  19 in total

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2.  Molecular cloning and functional analysis of the phosphomannomutase (PMM) gene from Dendrobium officinale and evidence for the involvement of an abiotic stress response during germination.

Authors:  Chunmei He; Songjun Zeng; Jaime A Teixeira da Silva; Zhenming Yu; Jianwen Tan; Jun Duan
Journal:  Protoplasma       Date:  2016-12-16       Impact factor: 3.356

3.  A suite of new genes defining salinity stress tolerance in seedlings of contrasting rice genotypes.

Authors:  Neelam Soda; Hemant R Kushwaha; Praveen Soni; Sneh L Singla-Pareek; Ashwani Pareek
Journal:  Funct Integr Genomics       Date:  2013-06-30       Impact factor: 3.410

Review 4.  Advances in understanding salt tolerance in rice.

Authors:  Showkat Ahmad Ganie; Kutubuddin Ali Molla; Robert J Henry; K V Bhat; Tapan Kumar Mondal
Journal:  Theor Appl Genet       Date:  2019-02-13       Impact factor: 5.699

5.  How do rice seedlings of landrace Pokkali survive in saline fields after transplantation? Physiology, biochemistry, and photosynthesis.

Authors:  Manjari Mishra; Silas Wungrampha; Gautam Kumar; Sneh Lata Singla-Pareek; Ashwani Pareek
Journal:  Photosynth Res       Date:  2020-07-06       Impact factor: 3.573

6.  OsSRO1a Interacts with RNA Binding Domain-Containing Protein (OsRBD1) and Functions in Abiotic Stress Tolerance in Yeast.

Authors:  Shweta Sharma; Charanpreet Kaur; Sneh L Singla-Pareek; Sudhir K Sopory
Journal:  Front Plant Sci       Date:  2016-02-03       Impact factor: 5.753

7.  Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance.

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Journal:  Front Plant Sci       Date:  2016-02-09       Impact factor: 5.753

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10.  Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses.

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