Literature DB >> 22640594

Identification of a metabolic bottleneck for cold acclimation in Arabidopsis thaliana.

Thomas Nägele1, Simon Stutz, Imke I Hörmiller, Arnd G Heyer.   

Abstract

Central carbohydrate metabolism of Arabidopsis thaliana is known to play a crucial role during cold acclimation and the acquisition of freezing tolerance. During cold exposure, many carbohydrates accumulate and a new metabolic homeostasis evolves. In the present study, we analyse the diurnal dynamics of carbohydrate homeostasis before and after cold exposure in three natural accessions showing distinct cold acclimation capacity. Diurnal dynamics of soluble carbohydrates were found to be significantly different in cold-sensitive and cold-tolerant accessions. Although experimentally determined maximum turnover rates for sucrose phosphate synthase in cold-acclimated leaves were higher for cold-tolerant accessions, model simulations of diurnal carbohydrate dynamics revealed similar fluxes. This implied a significantly higher capacity for sucrose synthesis in cold-tolerant than cold-sensitive accessions. Based on this implication resulting from mathematical model simulation, a critical temperature for sucrose synthesis was calculated using the Arrhenius equation and experimentally validated in the cold-sensitive accession C24. At the critical temperature suggested by model simulation, an imbalance in photosynthetic carbon fixation ultimately resulting in oxidative stress was observed. It is therefore concluded that metabolic capacities at least in part determine the ability of accessions of Arabidopsis thaliana to cope with changes in environmental conditions.
© 2012 The Authors. The Plant Journal © 2012 Blackwell Publishing Ltd.

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Year:  2012        PMID: 22640594     DOI: 10.1111/j.1365-313X.2012.05064.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  19 in total

1.  Integrative molecular profiling indicates a central role of transitory starch breakdown in establishing a stable C/N homeostasis during cold acclimation in two natural accessions of Arabidopsis thaliana.

Authors:  Matthias Nagler; Ella Nukarinen; Wolfram Weckwerth; Thomas Nägele
Journal:  BMC Plant Biol       Date:  2015-12-01       Impact factor: 4.215

2.  Mathematical modeling of plant metabolism-from reconstruction to prediction.

Authors:  Thomas Nägele; Wolfram Weckwerth
Journal:  Metabolites       Date:  2012-09-06

3.  A workflow for mathematical modeling of subcellular metabolic pathways in leaf metabolism of Arabidopsis thaliana.

Authors:  Thomas Nägele; Wolfram Weckwerth
Journal:  Front Plant Sci       Date:  2013-12-24       Impact factor: 5.753

4.  Mathematical modeling reveals that metabolic feedback regulation of SnRK1 and hexokinase is sufficient to control sugar homeostasis from energy depletion to full recovery.

Authors:  Thomas Nägele; Wolfram Weckwerth
Journal:  Front Plant Sci       Date:  2014-07-28       Impact factor: 5.753

5.  A Strategy for Functional Interpretation of Metabolomic Time Series Data in Context of Metabolic Network Information.

Authors:  Thomas Nägele; Lisa Fürtauer; Matthias Nagler; Jakob Weiszmann; Wolfram Weckwerth
Journal:  Front Mol Biosci       Date:  2016-03-07

6.  Physiological and Biochemical Mechanisms of Seed Priming-Induced Chilling Tolerance in Rice Cultivars.

Authors:  Saddam Hussain; Fahad Khan; Hafiz A Hussain; Lixiao Nie
Journal:  Front Plant Sci       Date:  2016-02-09       Impact factor: 5.753

7.  Granger causality in integrated GC-MS and LC-MS metabolomics data reveals the interface of primary and secondary metabolism.

Authors:  Hannes Doerfler; David Lyon; Thomas Nägele; Xiaoliang Sun; Lena Fragner; Franz Hadacek; Volker Egelhofer; Wolfram Weckwerth
Journal:  Metabolomics       Date:  2012-10-25       Impact factor: 4.290

8.  Solving the differential biochemical Jacobian from metabolomics covariance data.

Authors:  Thomas Nägele; Andrea Mair; Xiaoliang Sun; Lena Fragner; Markus Teige; Wolfram Weckwerth
Journal:  PLoS One       Date:  2014-04-02       Impact factor: 3.240

9.  Approximating the stabilization of cellular metabolism by compartmentalization.

Authors:  Lisa Fürtauer; Thomas Nägele
Journal:  Theory Biosci       Date:  2016-04-05       Impact factor: 1.919

10.  Temporal profiling of primary metabolites under chilling stress and its association with seedling chilling tolerance of rice (Oryza sativa L.).

Authors:  Xiu-Qin Zhao; Wen-Sheng Wang; Fan Zhang; Ting Zhang; Wen Zhao; Bin-Ying Fu; Zhi-Kang Li
Journal:  Rice (N Y)       Date:  2013-10-05       Impact factor: 4.783

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