Literature DB >> 22634212

Genetically encoded fluorescent voltage sensors using the voltage-sensing domain of Nematostella and Danio phosphatases exhibit fast kinetics.

Bradley J Baker1, Lei Jin, Zhou Han, Lawrence B Cohen, Marko Popovic, Jelena Platisa, Vincent Pieribone.   

Abstract

A substantial increase in the speed of the optical response of genetically encoded fluorescent protein voltage sensors (FP voltage sensors) was achieved by using the voltage-sensing phosphatase genes of Nematostella vectensis and Danio rerio. A potential N. vectensis voltage-sensing phosphatase was identified in silico. The voltage-sensing domain (S1-S4) of the N. vectensis homolog was used to create an FP voltage sensor called Nema. By replacing the phosphatase with a cerulean/citrine FRET pair, a new FP voltage sensor was synthesized with fast off kinetics (Tau(off)<5ms). However, the signal was small (ΔF/F=0.4%/200mV). FP voltage sensors using the D. rerio voltage-sensing phosphatase homolog, designated Zahra and Zahra 2, exhibited fast on and off kinetics within 2ms of the time constants observed with the organic voltage-sensitive dye, di4-ANEPPS. Mutagenesis of the S4 region of the Danio FP voltage sensor shifted the voltage dependence to more negative potentials but did not noticeably affect the kinetics of the optical signal.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22634212      PMCID: PMC3398169          DOI: 10.1016/j.jneumeth.2012.05.016

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  26 in total

1.  A genetically targetable fluorescent probe of channel gating with rapid kinetics.

Authors:  Kazuto Ataka; Vincent A Pieribone
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

2.  Family ties of gated pores: evolution of the sensor module.

Authors:  Attila Kumánovics; Gal Levin; Paul Blount
Journal:  FASEB J       Date:  2002-10       Impact factor: 5.191

Review 3.  VSDI: a new era in functional imaging of cortical dynamics.

Authors:  Amiram Grinvald; Rina Hildesheim
Journal:  Nat Rev Neurosci       Date:  2004-11       Impact factor: 34.870

4.  Three fluorescent protein voltage sensors exhibit low plasma membrane expression in mammalian cells.

Authors:  B J Baker; H Lee; V A Pieribone; L B Cohen; E Y Isacoff; T Knopfel; E K Kosmidis
Journal:  J Neurosci Methods       Date:  2006-11-28       Impact factor: 2.390

5.  Improving membrane voltage measurements using FRET with new fluorescent proteins.

Authors:  Hidekazu Tsutsui; Satoshi Karasawa; Yasushi Okamura; Atsushi Miyawaki
Journal:  Nat Methods       Date:  2008-07-11       Impact factor: 28.547

6.  Rapid time course of action potentials in spines and remote dendrites of mouse visual cortex neurons.

Authors:  Knut Holthoff; Dejan Zecevic; Arthur Konnerth
Journal:  J Physiol       Date:  2010-02-15       Impact factor: 5.182

7.  A high signal-to-noise Ca(2+) probe composed of a single green fluorescent protein.

Authors:  J Nakai; M Ohkura; K Imoto
Journal:  Nat Biotechnol       Date:  2001-02       Impact factor: 54.908

8.  Exploration of fluorescent protein voltage probes based on circularly permuted fluorescent proteins.

Authors:  Sunita Ghimire Gautam; Amelie Perron; Hiroki Mutoh; Thomas Knöpfel
Journal:  Front Neuroeng       Date:  2009-10-13

9.  Engineering and characterization of an enhanced fluorescent protein voltage sensor.

Authors:  Dimitar Dimitrov; You He; Hiroki Mutoh; Bradley J Baker; Lawrence Cohen; Walther Akemann; Thomas Knöpfel
Journal:  PLoS One       Date:  2007-05-09       Impact factor: 3.240

10.  Engineering of a genetically encodable fluorescent voltage sensor exploiting fast Ci-VSP voltage-sensing movements.

Authors:  Alicia Lundby; Hiroki Mutoh; Dimitar Dimitrov; Walther Akemann; Thomas Knöpfel
Journal:  PLoS One       Date:  2008-06-25       Impact factor: 3.240

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  24 in total

1.  Linker length and fusion site composition improve the optical signal of genetically encoded fluorescent voltage sensors.

Authors:  Arong Jung; Jessica E Garcia; Eunha Kim; Bong-June Yoon; Bradley J Baker
Journal:  Neurophotonics       Date:  2015-03-05       Impact factor: 3.593

2.  Improved detection of electrical activity with a voltage probe based on a voltage-sensing phosphatase.

Authors:  Hidekazu Tsutsui; Yuka Jinno; Akiko Tomita; Yusuke Niino; Yoshiyuki Yamada; Katsuhiko Mikoshiba; Atsushi Miyawaki; Yasushi Okamura
Journal:  J Physiol       Date:  2013-07-08       Impact factor: 5.182

3.  Computer-generated holography enhances voltage dye fluorescence discrimination in adjacent neuronal structures.

Authors:  Amanda J Foust; Valeria Zampini; Dimitrii Tanese; Eirini Papagiakoumou; Valentina Emiliani
Journal:  Neurophotonics       Date:  2015-01-07       Impact factor: 3.593

Review 4.  Probing neuronal activities with genetically encoded optical indicators: from a historical to a forward-looking perspective.

Authors:  Hiroki Mutoh; Thomas Knöpfel
Journal:  Pflugers Arch       Date:  2012-12-28       Impact factor: 3.657

Review 5.  Genetically Encoded Voltage Indicators: Opportunities and Challenges.

Authors:  Helen H Yang; François St-Pierre
Journal:  J Neurosci       Date:  2016-09-28       Impact factor: 6.167

Review 6.  Voltage and Calcium Imaging of Brain Activity.

Authors:  Masoud Sepehri Rad; Yunsook Choi; Lawrence B Cohen; Bradley J Baker; Sheng Zhong; Douglas A Storace; Oliver R Braubach
Journal:  Biophys J       Date:  2017-11-01       Impact factor: 4.033

Review 7.  Designs and sensing mechanisms of genetically encoded fluorescent voltage indicators.

Authors:  François St-Pierre; Mariya Chavarha; Michael Z Lin
Journal:  Curr Opin Chem Biol       Date:  2015-06-12       Impact factor: 8.822

8.  Fast two-photon imaging of subcellular voltage dynamics in neuronal tissue with genetically encoded indicators.

Authors:  Simon Chamberland; Helen H Yang; Michael M Pan; Stephen W Evans; Sihui Guan; Mariya Chavarha; Ying Yang; Charleen Salesse; Haodi Wu; Joseph C Wu; Thomas R Clandinin; Katalin Toth; Michael Z Lin; François St-Pierre
Journal:  Elife       Date:  2017-07-27       Impact factor: 8.140

9.  Route to genetically targeted optical electrophysiology: development and applications of voltage-sensitive fluorescent proteins.

Authors:  Walther Akemann; Chenchen Song; Hiroki Mutoh; Thomas Knöpfel
Journal:  Neurophotonics       Date:  2015 Apr-Jun       Impact factor: 3.593

Review 10.  Optical consequences of a genetically-encoded voltage indicator with a pH sensitive fluorescent protein.

Authors:  Bok Eum Kang; Sungmoo Lee; Bradley J Baker
Journal:  Neurosci Res       Date:  2018-10-18       Impact factor: 3.304

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