Literature DB >> 22633887

NMR spectroscopy of G-quadruplexes.

Michael Adrian1, Brahim Heddi, Anh Tuân Phan.   

Abstract

G-rich DNA and RNA sequences can form four-stranded structures called G-quadruplexes. Such structures have gained significant interest in the past decade with increasing evidence of their biological role. G-quadruplex structures can be polymorphic and dynamic. NMR spectroscopy has played an important role in G-quadruplex research. Here we review on the application of NMR techniques to study structure, dynamics and interaction of G-quadruplexes.
Copyright © 2012. Published by Elsevier Inc.

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Year:  2012        PMID: 22633887     DOI: 10.1016/j.ymeth.2012.05.003

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  78 in total

1.  Overlapping but distinct: a new model for G-quadruplex biochemical specificity.

Authors:  Martin Volek; Sofia Kolesnikova; Katerina Svehlova; Pavel Srb; Ráchel Sgallová; Tereza Streckerová; Juan A Redondo; Václav Veverka; Edward A Curtis
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

2.  An RNA-binding Protein, Lin28, Recognizes and Remodels G-quartets in the MicroRNAs (miRNAs) and mRNAs It Regulates.

Authors:  Elizabeth O'Day; Minh T N Le; Shunsuke Imai; Shen Mynn Tan; Rory Kirchner; Haribabu Arthanari; Oliver Hofmann; Gerhard Wagner; Judy Lieberman
Journal:  J Biol Chem       Date:  2015-06-04       Impact factor: 5.157

3.  ESI mass spectrometric exploration of selective recognition of G-quadruplex in c-myb oncogene promoter using a novel flexible cyclic polyamide.

Authors:  Xiaojie Cui; Qiang Zhang; Han Chen; Jiang Zhou; Gu Yuan
Journal:  J Am Soc Mass Spectrom       Date:  2014-01-23       Impact factor: 3.109

4.  ESI-MS Investigation of an Equilibrium between a Bimolecular Quadruplex DNA and a Duplex DNA/RNA Hybrid.

Authors:  Monica L Birrento; Tracy M Bryan; Siritron Samosorn; Jennifer L Beck
Journal:  J Am Soc Mass Spectrom       Date:  2015-04-24       Impact factor: 3.109

5.  Short loop length and high thermal stability determine genomic instability induced by G-quadruplex-forming minisatellites.

Authors:  Aurèle Piazza; Michael Adrian; Frédéric Samazan; Brahim Heddi; Florian Hamon; Alexandre Serero; Judith Lopes; Marie-Paule Teulade-Fichou; Anh Tuân Phan; Alain Nicolas
Journal:  EMBO J       Date:  2015-05-08       Impact factor: 11.598

6.  Structure of a left-handed DNA G-quadruplex.

Authors:  Wan Jun Chung; Brahim Heddi; Emmanuelle Schmitt; Kah Wai Lim; Yves Mechulam; Anh Tuân Phan
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-18       Impact factor: 11.205

7.  Controlling lipid micelle stability using oligonucleotide headgroups.

Authors:  Samantha E Wilner; Samuel E Sparks; David Cowburn; Mark E Girvin; Matthew Levy
Journal:  J Am Chem Soc       Date:  2015-02-03       Impact factor: 15.419

8.  The RAD17 Promoter Sequence Contains a Potential Tail-Dependent G-Quadruplex That Downregulates Gene Expression upon Oxidative Modification.

Authors:  Judy Zhu; Aaron M Fleming; Cynthia J Burrows
Journal:  ACS Chem Biol       Date:  2018-08-15       Impact factor: 5.100

9.  Oxidative Modification of the Potential G-Quadruplex Sequence in the PCNA Gene Promoter Can Turn on Transcription.

Authors:  Samuel C J Redstone; Aaron M Fleming; Cynthia J Burrows
Journal:  Chem Res Toxicol       Date:  2019-01-14       Impact factor: 3.739

10.  Anomeric DNA quadruplexes.

Authors:  Natalia A Kolganova; Anna M Varizhuk; Roman A Novikov; Vladimir L Florentiev; Galina E Pozmogova; Olga F Borisova; Anna K Shchyolkina; Igor P Smirnov; Dmitry N Kaluzhny; Edward N Timofeev
Journal:  Artif DNA PNA XNA       Date:  2014
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