Literature DB >> 22628364

Seed colour loci, homoeology and linkage groups of the C genome chromosomes revealed in Brassica rapa-B. oleracea monosomic alien addition lines.

Waheeb K Heneen1, Mulatu Geleta, Kerstin Brismar, Zhiyong Xiong, J Chris Pires, Robert Hasterok, Andrew I Stoute, Roderick J Scott, Graham J King, Smita Kurup.   

Abstract

BACKGROUND AND AIMS: Brassica rapa and B. oleracea are the progenitors of oilseed rape B. napus. The addition of each chromosome of B. oleracea to the chromosome complement of B. rapa results in a series of monosomic alien addition lines (MAALs). Analysis of MAALs determines which B. oleracea chromosomes carry genes controlling specific phenotypic traits, such as seed colour. Yellow-seeded oilseed rape is a desirable breeding goal both for food and livestock feed end-uses that relate to oil, protein and fibre contents. The aims of this study included developing a missing MAAL to complement an available series, for studies on seed colour control, chromosome homoeology and assignment of linkage groups to B. oleracea chromosomes.
METHODS: A new batch of B. rapa-B. oleracea aneuploids was produced to generate the missing MAAL. Seed colour and other plant morphological features relevant to differentiation of MAALs were recorded. For chromosome characterization, Snow's carmine, fluorescence in situ hybridization (FISH) and genomic in situ hybridization (GISH) were used. KEY
RESULTS: The final MAAL was developed. Morphological traits that differentiated the MAALs comprised cotyledon number, leaf morphology, flower colour and seed colour. Seed colour was controlled by major genes on two B. oleracea chromosomes and minor genes on five other chromosomes of this species. Homoeologous pairing was largely between chromosomes with similar centromeric positions. FISH, GISH and a parallel microsatellite marker analysis defined the chromosomes in terms of their linkage groups. Conclusions A complete set of MAALs is now available for genetic, genomic, evolutionary and breeding perspectives. Defining chromosomes that carry specific genes, physical localization of DNA markers and access to established genetic linkage maps contribute to the integration of these approaches, manifested in the confirmed correspondence of linkage groups with specific chromosomes. Applications include marker-assisted selection and breeding for yellow seeds.

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Year:  2012        PMID: 22628364      PMCID: PMC3359914          DOI: 10.1093/aob/mcs052

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  49 in total

1.  Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus.

Authors:  Zhiyong Xiong; Robert T Gaeta; J Chris Pires
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-21       Impact factor: 11.205

Review 2.  Production of alien chromosome additions and their utility in plant genetics.

Authors:  S-B Chang; H de Jong
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

3.  Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution.

Authors:  K Song; P Lu; K Tang; T C Osborn
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

4.  Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. trilocularis-B. oleracea var. alboglabra monosomic alien addition lines.

Authors:  Mulatu Geleta; Waheeb K Heneen; Andrew I Stoute; Nira Muttucumaru; Roderick J Scott; Graham J King; Smita Kurup; Tomas Bryngelsson
Journal:  Theor Appl Genet       Date:  2012-03-16       Impact factor: 5.699

5.  Construction of an oilseed rape (Brassica napus L.) genetic map with SSR markers.

Authors:  J Piquemal; E Cinquin; F Couton; C Rondeau; E Seignoret; I Doucet; D Perret; M-J Villeger; P Vincourt; P Blanchard
Journal:  Theor Appl Genet       Date:  2005-11-10       Impact factor: 5.699

6.  Interspecific chromosomal rearrangements in monosomic addition lines of Allium.

Authors:  L Barthes; A Ricroch
Journal:  Genome       Date:  2001-10       Impact factor: 2.166

7.  Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana.

Authors:  Isobel A P Parkin; Sigrun M Gulden; Andrew G Sharpe; Lewis Lukens; Martin Trick; Thomas C Osborn; Derek J Lydiate
Journal:  Genetics       Date:  2005-07-14       Impact factor: 4.562

Review 8.  Cytogenetics and genome analysis in Brassica crops.

Authors:  Rod J Snowdon
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

Review 9.  Homoeologous recombination in allopolyploids: the polyploid ratchet.

Authors:  Robert T Gaeta; J Chris Pires
Journal:  New Phytol       Date:  2009-12-01       Impact factor: 10.151

10.  Addition of individual chromosomes of maize inbreds B73 and Mo17 to oat cultivars Starter and Sun II: maize chromosome retention, transmission, and plant phenotype.

Authors:  Howard W Rines; Ronald L Phillips; Ralf G Kynast; Ron J Okagaki; Mark W Galatowitsch; Paul A Huettl; Adrian O Stec; Morrison S Jacobs; Jayanti Suresh; Hedera L Porter; Matthew D Walch; Candida B Cabral
Journal:  Theor Appl Genet       Date:  2009-08-26       Impact factor: 5.699

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  14 in total

1.  Extraction of the Constituent Subgenomes of the Natural Allopolyploid Rapeseed (Brassica napus L.).

Authors:  Bin Zhu; Yuqin Tu; Pan Zeng; Xianhong Ge; Zaiyun Li
Journal:  Genetics       Date:  2016-09-16       Impact factor: 4.562

2.  Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. trilocularis-B. oleracea var. alboglabra monosomic alien addition lines.

Authors:  Mulatu Geleta; Waheeb K Heneen; Andrew I Stoute; Nira Muttucumaru; Roderick J Scott; Graham J King; Smita Kurup; Tomas Bryngelsson
Journal:  Theor Appl Genet       Date:  2012-03-16       Impact factor: 5.699

3.  The fate of chromosomes and alleles in an allohexaploid Brassica population.

Authors:  Annaliese S Mason; Matthew N Nelson; Junko Takahira; Wallace A Cowling; Gustavo Moreira Alves; Arkaprava Chaudhuri; Ning Chen; Mohana E Ragu; Jessica Dalton-Morgan; Olivier Coriton; Virginie Huteau; Frédérique Eber; Anne-Marie Chèvre; Jacqueline Batley
Journal:  Genetics       Date:  2014-02-20       Impact factor: 4.562

4.  Cloning of TTG1 gene and PCR identification of genomes A, B and C in Brassica species.

Authors:  Mingli Yan; Xianjun Liu; Chunyun Guan; Lili Liu; Jianhua Xiang; Ying Lu; Zhongsong Liu
Journal:  Genetica       Date:  2014-04-22       Impact factor: 1.082

5.  Development of a complete set of monosomic alien addition lines between Brassica napus and Isatis indigotica (Chinese woad).

Authors:  Lei Kang; Xuezhu Du; Yingying Zhou; Bin Zhu; Xianhong Ge; Zaiyun Li
Journal:  Plant Cell Rep       Date:  2014-04-29       Impact factor: 4.570

6.  Evolutionary genomics of miniature inverted-repeat transposable elements (MITEs) in Brassica.

Authors:  Faisal Nouroz; Shumaila Noreen; J S Heslop-Harrison
Journal:  Mol Genet Genomics       Date:  2015-07-01       Impact factor: 3.291

7.  Generation and characterization of Brassica rapa ssp. pekinensis - B. oleracea var. capitata monosomic and disomic alien addition lines.

Authors:  Ai Xia Gu; Shu Xing Shen; Yan Hua Wang; Jian Jun Zhao; Shu Xin Xuan; Xue Ping Chen; Xiao Feng Li; Shuang Xia Luo; Yu Jing Zhao
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

8.  Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas.

Authors:  Alexandre Pelé; Matthieu Falque; Gwenn Trotoux; Frédérique Eber; Sylvie Nègre; Marie Gilet; Virginie Huteau; Maryse Lodé; Thibaut Jousseaume; Sylvain Dechaumet; Jérôme Morice; Charles Poncet; Olivier Coriton; Olivier C Martin; Mathieu Rousseau-Gueutin; Anne-Marie Chèvre
Journal:  PLoS Genet       Date:  2017-05-11       Impact factor: 5.917

9.  Development of Brassica oleracea-nigra monosomic alien addition lines: genotypic, cytological and morphological analyses.

Authors:  Chen Tan; Cheng Cui; Yi Xiang; Xianhong Ge; Zaiyun Li
Journal:  Theor Appl Genet       Date:  2017-09-07       Impact factor: 5.699

10.  Genome-Wide Gene Expression Disturbance by Single A1/C1 Chromosome Substitution in Brassica rapa Restituted From Natural B. napus.

Authors:  Bin Zhu; Yang Xiang; Pan Zeng; Bowei Cai; Xiaolong Huang; Xianhong Ge; Qingbei Weng; Zaiyun Li
Journal:  Front Plant Sci       Date:  2018-03-20       Impact factor: 5.753

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