Literature DB >> 22626843

Sex-specific gene expression during asexual development of Neurospora crassa.

Zheng Wang1, Koryu Kin, Francesc López-Giráldez, Hanna Johannesson, Jeffrey P Townsend.   

Abstract

The impact of loci that determine sexual identity upon the asexual, dominant stage of fungal life history has been well studied. To investigate their impact, expression differences between strains of different mating type during asexual development were assayed, with RNA sampled from otherwise largely isogenic mat A and mat a strains of Neurospora crassa at early, middle, and late clonal stages of development. We observed significant differences in overall gene expression between mating types across clonal development, especially at late development stages. The expression levels of mating-type genes and pheromone genes were assayed by reverse transcription and quantitative PCR, revealing expression of pheromone and receptor genes in strains of both mating types in all development stages, and revealing that mating type (mat) genes were increasingly expressed over the course of asexual development. Interestingly, among differentially expressed genes, the mat A genotype more frequently exhibited a higher expression level than mat a, and demonstrated greater transcriptional regulatory dynamism. Significant up-regulation of expression was observed for many late light-responsive genes at late asexual development stages. Further investigation of the impact of light and the roles of light response genes in asexual development of both mating types are warranted.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22626843      PMCID: PMC3397379          DOI: 10.1016/j.fgb.2012.05.004

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  59 in total

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Authors:  M Kanehisa; S Goto
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2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  The Neurospora crassa pheromone precursor genes are regulated by the mating type locus and the circadian clock.

Authors:  Piotr Bobrowicz; Rebecca Pawlak; Alejandro Correa; Deborah Bell-Pedersen; Daniel J Ebbole
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

Review 4.  The rhythms of life: circadian output pathways in Neurospora.

Authors:  Michael W Vitalini; Renato M de Paula; William D Park; Deborah Bell-Pedersen
Journal:  J Biol Rhythms       Date:  2006-12       Impact factor: 3.182

5.  Light induction of the clock-controlled gene ccg-1 is not transduced through the circadian clock in Neurospora crassa.

Authors:  G Arpaia; J J Loros; J C Dunlap; G Morelli; G Macino
Journal:  Mol Gen Genet       Date:  1995-04-20

6.  Spatial differentiation in the vegetative mycelium of Aspergillus niger.

Authors:  Ana M Levin; Ronald P de Vries; Ana Conesa; Charissa de Bekker; Manuel Talon; Hildegard H Menke; Noel N M E van Peij; Han A B Wösten
Journal:  Eukaryot Cell       Date:  2007-10-19

7.  Genome-wide analysis of light-inducible responses reveals hierarchical light signalling in Neurospora.

Authors:  Chen-Hui Chen; Carol S Ringelberg; Robert H Gross; Jay C Dunlap; Jennifer J Loros
Journal:  EMBO J       Date:  2009-03-05       Impact factor: 11.598

8.  Gene expression shifts during perithecium development in Gibberella zeae (anamorph Fusarium graminearum), with particular emphasis on ion transport proteins.

Authors:  Heather E Hallen; Marianne Huebner; Shin-Han Shiu; Ulrich Güldener; Frances Trail
Journal:  Fungal Genet Biol       Date:  2007-05-08       Impact factor: 3.495

9.  Species-specific and mating type-specific DNA regions adjacent to mating type idiomorphs in the genus Neurospora.

Authors:  T A Randall; R L Metzenberg
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

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Authors:  Frédérique Bidard; Jinane Aït Benkhali; Evelyne Coppin; Sandrine Imbeaud; Pierre Grognet; Hervé Delacroix; Robert Debuchy
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  12 in total

1.  Light sensing by opsins and fungal ecology: NOP-1 modulates entry into sexual reproduction in response to environmental cues.

Authors:  Zheng Wang; Junrui Wang; Ning Li; Jigang Li; Frances Trail; Jay C Dunlap; Jeffrey P Townsend
Journal:  Mol Ecol       Date:  2017-12-12       Impact factor: 6.185

2.  Mating-Type Genes Play an Important Role in Fruiting Body Development in Morchella sextelata.

Authors:  Qizheng Liu; Shan Qu; Guoqiang He; Jinkang Wei; Caihong Dong
Journal:  J Fungi (Basel)       Date:  2022-05-25

3.  Global gene expression and focused knockout analysis reveals genes associated with fungal fruiting body development in Neurospora crassa.

Authors:  Zheng Wang; Francesc Lopez-Giraldez; Nina Lehr; Marta Farré; Ralph Common; Frances Trail; Jeffrey P Townsend
Journal:  Eukaryot Cell       Date:  2013-11-15

4.  Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon.

Authors:  Yizhou Wang; Kristina M Smith; John W Taylor; Michael Freitag; Jason E Stajich
Journal:  G3 (Bethesda)       Date:  2015-06-23       Impact factor: 3.154

5.  Gene expression differences among three Neurospora species reveal genes required for sexual reproduction in Neurospora crassa.

Authors:  Nina A Lehr; Zheng Wang; Ning Li; David A Hewitt; Francesc López-Giráldez; Frances Trail; Jeffrey P Townsend
Journal:  PLoS One       Date:  2014-10-20       Impact factor: 3.240

6.  Selection and evaluation of reference genes for expression studies with quantitative PCR in the model fungus Neurospora crassa under different environmental conditions in continuous culture.

Authors:  Kathleen D Cusick; Lisa A Fitzgerald; Russell K Pirlo; Allison L Cockrell; Emily R Petersen; Justin C Biffinger
Journal:  PLoS One       Date:  2014-12-04       Impact factor: 3.240

7.  Mating-type genes of the anamorphic fungus Ulocladium botrytis affect both asexual sporulation and sexual reproduction.

Authors:  Qun Wang; Shi Wang; Chen Lin Xiong; Timothy Y James; Xiu Guo Zhang
Journal:  Sci Rep       Date:  2017-08-11       Impact factor: 4.379

8.  mus-52 disruption and metabolic regulation in Neurospora crassa: Transcriptional responses to extracellular phosphate availability.

Authors:  Maíra P Martins; Eriston V Gomes; Pablo R Sanches; Wellington R Pedersoli; Nilce M Martinez-Rossi; Antonio Rossi
Journal:  PLoS One       Date:  2018-04-18       Impact factor: 3.240

9.  Sex-linked transcriptional divergence in the hermaphrodite fungus Neurospora tetrasperma.

Authors:  Nicklas Samils; Anastasia Gioti; Magnus Karlsson; Yu Sun; Takao Kasuga; Eric Bastiaans; Zheng Wang; Ning Li; Jeffrey P Townsend; Hanna Johannesson
Journal:  Proc Biol Sci       Date:  2013-06-19       Impact factor: 5.349

10.  The Fast-Evolving phy-2 Gene Modulates Sexual Development in Response to Light in the Model Fungus Neurospora crassa.

Authors:  Zheng Wang; Ning Li; Jigang Li; Jay C Dunlap; Frances Trail; Jeffrey P Townsend
Journal:  MBio       Date:  2016-03-08       Impact factor: 7.867

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