Literature DB >> 22612907

On integrating experimental and theoretical models to determine physical mechanisms of morphogenesis.

Victor D Varner1, Larry A Taber.   

Abstract

Researchers in developmental biology are increasingly recognizing the value of theoretical models in studies of morphogenesis. However, creating and testing realistic quantitative models for morphogenetic processes can be an extremely challenging task. The focus of this paper is on models for the mechanics of morphogenesis. Models for these problems often must include large changes in geometry, leading to highly nonlinear problems with the possibility of multiple solutions that must be sorted out using experimental data. Here, we illustrate our approach to these problems using the specific example of head fold formation in the early chick embryo. The interplay between experimental and theoretical results is emphasized throughout, as the model is gradually refined. Some of the limitations inherent in theoretical/computational modeling of biological systems are also discussed.
Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

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Year:  2012        PMID: 22612907      PMCID: PMC3423499          DOI: 10.1016/j.biosystems.2012.05.001

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  44 in total

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Authors:  J F Colas; G C Schoenwolf
Journal:  Dev Dyn       Date:  2001-06       Impact factor: 3.780

2.  Mechanical induction of Twist in the Drosophila foregut/stomodeal primordium.

Authors:  Emmanuel Farge
Journal:  Curr Biol       Date:  2003-08-19       Impact factor: 10.834

3.  Cellular mechanisms of neural fold formation and morphogenesis in the chick embryo.

Authors:  A Lawson; H Anderson; G C Schoenwolf
Journal:  Anat Rec       Date:  2001-02-01

Review 4.  Verification, validation and sensitivity studies in computational biomechanics.

Authors:  Andrew E Anderson; Benjamin J Ellis; Jeffrey A Weiss
Journal:  Comput Methods Biomech Biomed Engin       Date:  2007-06       Impact factor: 1.763

5.  Stress-dependent finite growth in soft elastic tissues.

Authors:  E K Rodriguez; A Hoger; A D McCulloch
Journal:  J Biomech       Date:  1994-04       Impact factor: 2.712

6.  The mechanical basis of morphogenesis. I. Epithelial folding and invagination.

Authors:  G M Odell; G Oster; P Alberch; B Burnside
Journal:  Dev Biol       Date:  1981-07-30       Impact factor: 3.582

7.  Endogenous patterns of mechanical stress are required for branching morphogenesis.

Authors:  Nikolce Gjorevski; Celeste M Nelson
Journal:  Integr Biol (Camb)       Date:  2010-08-17       Impact factor: 2.192

8.  Integration of contractile forces during tissue invagination.

Authors:  Adam C Martin; Michael Gelbart; Rodrigo Fernandez-Gonzalez; Matthias Kaschube; Eric F Wieschaus
Journal:  J Cell Biol       Date:  2010-03-01       Impact factor: 10.539

9.  Mechanical signals trigger Myosin II redistribution and mesoderm invagination in Drosophila embryos.

Authors:  Philippe-Alexandre Pouille; Padra Ahmadi; Anne-Christine Brunet; Emmanuel Farge
Journal:  Sci Signal       Date:  2009-04-14       Impact factor: 8.192

10.  A deformation gradient decomposition method for the analysis of the mechanics of morphogenesis.

Authors:  José J Muñoz; Kathy Barrett; Mark Miodownik
Journal:  J Biomech       Date:  2006-06-30       Impact factor: 2.712

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  4 in total

1.  A new hypothesis for foregut and heart tube formation based on differential growth and actomyosin contraction.

Authors:  Hadi S Hosseini; Kara E Garcia; Larry A Taber
Journal:  Development       Date:  2017-05-19       Impact factor: 6.868

2.  Computational and experimental study of the mechanics of embryonic wound healing.

Authors:  Matthew A Wyczalkowski; Victor D Varner; Larry A Taber
Journal:  J Mech Behav Biomed Mater       Date:  2013-08-02

Review 3.  Epithelial machines of morphogenesis and their potential application in organ assembly and tissue engineering.

Authors:  Sagar D Joshi; Lance A Davidson
Journal:  Biomech Model Mechanobiol       Date:  2012-08-02

Review 4.  Of form and function: Early cardiac morphogenesis across classical and emerging model systems.

Authors:  Bhavana Shewale; Nicole Dubois
Journal:  Semin Cell Dev Biol       Date:  2021-05-14       Impact factor: 7.499

  4 in total

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