Literature DB >> 22612136

Digital simulation of staining in histopathology multispectral images: enhancement and linear transformation of spectral transmittance.

Pinky A Bautista1, Yukako Yagi.   

Abstract

Hematoxylin and eosin (H&amp;E) stain is currently the most popular for routine histopathology staining. Special and/or immuno-histochemical (IHC) staining is often requested to further corroborate the initial diagnosis on H&amp;E stained tissue sections. Digital simulation of staining (or digital staining) can be a very valuable tool to produce the desired stained images from the H&amp;E stained tissue sections instantaneously. We present an approach to digital staining of histopathology multispectral images by combining the effects of spectral enhancement and spectral transformation. Spectral enhancement is accomplished by shifting the N-band original spectrum of the multispectral pixel with the weighted difference between the pixel's original and estimated spectrum; the spectrum is estimated using M < N principal component (PC) vectors. The pixel's enhanced spectrum is transformed to the spectral configuration associated to its reaction to a specific stain by utilizing an N × N transformation matrix, which is derived through application of least mean squares method to the enhanced and target spectral transmittance samples of the different tissue components found in the image. Results of our experiments on the digital conversion of an H&amp;E stained multispectral image to its Masson's trichrome stained equivalent show the viability of the method.

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Year:  2012        PMID: 22612136     DOI: 10.1117/1.JBO.17.5.056013

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  7 in total

Review 1.  Medical hyperspectral imaging: a review.

Authors:  Guolan Lu; Baowei Fei
Journal:  J Biomed Opt       Date:  2014-01       Impact factor: 3.170

2.  Context-free hyperspectral image enhancement for wide-field optical biomarker visualization.

Authors:  Arturo Pardo; José A Gutiérrez-Gutiérrez; José M López-Higuera; Olga M Conde
Journal:  Biomed Opt Express       Date:  2019-12-09       Impact factor: 3.732

3.  Dual-mode emission and transmission microscopy for virtual histochemistry using hematoxylin- and eosin-stained tissue sections.

Authors:  Farzad Fereidouni; Austin Todd; Yuheng Li; Che-Wei Chang; Keith Luong; Avi Rosenberg; Yong-Jae Lee; James W Chan; Alexander Borowsky; Karen Matsukuma; Kuang-Yu Jen; Richard Levenson
Journal:  Biomed Opt Express       Date:  2019-11-26       Impact factor: 3.732

4.  Cancer detection from stained biopsies using high-speed spectral imaging.

Authors:  Eugene Brozgol; Pramod Kumar; Daniela Necula; Irena Bronshtein-Berger; Moshe Lindner; Shlomi Medalion; Lee Twito; Yotam Shapira; Helena Gondra; Iris Barshack; Yuval Garini
Journal:  Biomed Opt Express       Date:  2022-03-28       Impact factor: 3.562

5.  Unsupervised segmentation of low-contrast multichannel images: discrimination of tissue components in microscopic images of unstained specimens.

Authors:  Ivica Kopriva; Marijana Popović Hadžija; Mirko Hadžija; Gorana Aralica
Journal:  Sci Rep       Date:  2015-06-23       Impact factor: 4.379

6.  Color standardization in whole slide imaging using a color calibration slide.

Authors:  Pinky A Bautista; Noriaki Hashimoto; Yukako Yagi
Journal:  J Pathol Inform       Date:  2014-01-31

7.  Raman Spectroscopy of Head and Neck Cancer: Separation of Malignant and Healthy Tissue Using Signatures Outside the "Fingerprint" Region.

Authors:  Stephen Holler; Elaina Mansley; Christopher Mazzeo; Michael J Donovan; Maximiliano Sobrero; Brett A Miles
Journal:  Biosensors (Basel)       Date:  2017-05-14
  7 in total

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